Alosa sapidissima (American shad): 121685367
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Entry
121685367 CDS
T11137
Symbol
lhcgr
Name
(RefSeq) lutropin-choriogonadotropic hormone receptor isoform X1
KO
K04248
lutropin-choriogonadotropic hormone receptor
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04020
Calcium signaling pathway
asad04080
Neuroactive ligand-receptor interaction
asad04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121685367 (lhcgr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121685367 (lhcgr)
04081 Hormone signaling
121685367 (lhcgr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
asad04030
]
121685367 (lhcgr)
G protein-coupled receptors [BR:
asad04030
]
Rhodopsin family
Peptide
Lutropin-choriogonadotropic hormone
121685367 (lhcgr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
Motif
Other DBs
NCBI-GeneID:
121685367
NCBI-ProteinID:
XP_041921777
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Position
16:17281197..17292528
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AA seq
729 aa
AA seq
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MKTRISLFSTGDLAALNQRTFCIYFGFGKSGRAFAACLPLTKHHLAMWIFHLLPVFCVWL
NCESVFAASFECPPMCECSINRIRCNNGTEHAATLTQKKPGKDINLMGISLKVISSRSFD
GLREVTSISITQSITLERIQPLAFNSLYNLTDITIKNTRNLVHIGQRAFNNLPKLKHLVI
SNTGITVFPDFTAVSSLNPSFELLEMCDNLLLTSIPPNAFLGIAIATMNLYNNGFKEIRS
HAFNGTKIEQLSLKNNRNLRVIHQEAFTGAVGPVLLNVSSSVLETLPPRGLESVEVLVAE
SAFALKRLPNFNSLLSLRDAKLTYPSHCCALNSWDAHRESPLIAAMSNGSISWDSISEAE
VLEQYPDLDPERLPLKCTPEPDAFNPCEDLAGFGFLRVAIWLINILAIIGNLTVLLVFFT
SGTKLTVPRFLMCHLAFADLCIGIYLLMIAAVDLRTRGHYSQHAIEWQTGAGCSVAGFLA
VFGGELSVYTLCNITLERWHTITHALRLERRLGLSHATAIMAAGWLLCLGVALLPLVGVS
SYSKVSMCLPMDIETPLAQAFVILLLLLNVAAFLVVCVSYVRIYIAVHNPEFPGRNADTK
IAKRMAVLIFTDFLCMAPISFFAISAAFKMPLITVTNSKILLVLFYPINSCANPFLYAIF
TKAFRKDACKLLSSMGCCKSKAGLYRMKTYCSGKIAQSHPDGARKDPGVRHLSAFQHQKP
KIETKGKEG
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacgtatatctctcttttcaactggcgaccttgcagcacttaaccagcgcacc
ttttgcatctactttggatttggaaagagcgggagagccttcgctgcctgcctgccgctg
acaaaacaccatttagcgatgtggatatttcatctgcttcccgtgttctgtgtttggctt
aactgtgagagtgtgtttgccgcatcttttgagtgtcctccgatgtgtgaatgctctatc
aacagaatcagatgcaataacgggacagagcatgccgctactttgactcaaaagaaacct
ggcaaagatataaatcttatgggcatatcgctgaaggtcatcagcagccgcagctttgat
ggactgcgagaggtgacgagcatatcaataacccagagcatcacactggaaaggatacaa
cctctagcattcaacagtctctataatctcacagatatcactatcaaaaacacaaggaac
ctggtgcacatcggccaacgggcgttcaacaacctcccgaagttaaaacatctagtcatt
tcaaacactgggattacggtattccctgatttcactgcagtctcttctcttaatcccagt
tttgaacttttggaaatgtgtgataatctcctcctgacttcaataccaccaaatgctttt
cttggaattgctattgcaaccatgaatctctacaacaatggtttcaaagagataagaagc
catgccttcaatgggacaaagatagaacaactttccttaaagaacaacagaaacctgcgt
gtgattcaccaagaggcctttacaggagctgtaggccctgtcttgctgaatgtgtcgtca
tcagtgctggagaccctaccaccccgtggccttgagtccgttgaagtgctggttgcagag
agcgcatttgcgctgaagagacttccaaatttcaacagccttctgagcctcagggatgcc
aagctgacctatcccagccactgctgtgctctgaactcctgggatgcccacagggaatca
cctctaattgctgcaatgagcaatgggtccatatcctgggatagcatttcagaagcagaa
gttttagaacaatatccagacctagacccagaaaggctacccctgaagtgtaccccagag
cccgacgcattcaacccctgtgaggacctggcgggttttggcttcctgcgcgtggctatc
tggctaatcaacatcctggccatcattggcaacctgaccgttctgttggtgttcttcacc
agcggcaccaagctgacggtcccacgcttcctgatgtgccacctggccttcgccgacctc
tgtattggcatctacctgctgatgattgcagctgtggacctgcggactcgcggtcactac
agccagcacgccatcgagtggcagacgggtgccggctgcagcgtggcgggattcctggcc
gtgttcggcggggagctgtccgtctacactctctgcaacatcaccctggagcgctggcac
accatcacccacgcgctgcggctggagcgccgcctggggctgtcgcacgccaccgccatc
atggccgccggctggctgctgtgcctgggcgtggcgctgctccccctagtgggcgtcagc
agctacagcaaggtgagcatgtgcctgcccatggacatcgagacaccgctggcccaggcc
ttcgtcatcctgctgctccttctcaacgtggctgccttcctggtggtgtgtgtaagctac
gtgcgcatttacatcgccgtgcacaaccccgagttcccgggccgcaacgctgacaccaag
atcgccaagcgcatggccgtgctcatcttcaccgacttcctgtgcatggcccccatctcc
ttcttcgccatctcggccgccttcaagatgcccctcatcaccgtcaccaactccaagatc
ctgctggtcctcttctaccccatcaactcgtgcgccaacccattcctgtacgccatcttc
acaaaggccttccgtaaggatgcctgcaagctcttgagctccatgggctgctgcaagagc
aaggctggcctgtaccgcatgaagacatactgctctgggaaaatagcacaaagccaccca
gacggggcgcgcaaagatccaggggtgcgacacctgtcggctttccagcaccagaaaccc
aaaattgagacaaagggcaaagaaggatga
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