Alosa sapidissima (American shad): 121685381
Help
Entry
121685381 CDS
T11137
Symbol
rel
Name
(RefSeq) proto-oncogene c-Rel isoform X1
KO
K09254
c-Rel proto-oncogene protein
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121685381 (rel)
Transcription factors [BR:
asad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
121685381 (rel)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
121685381
NCBI-ProteinID:
XP_041921804
LinkDB
All DBs
Position
16:complement(14223804..14233872)
Genome browser
AA seq
603 aa
AA seq
DB search
MDVHLLPLHGDPHMVVEPSVQIFEQPRQRGMRFRYKCEGRSAGSIPGDKSSDNNRTYPSI
QILNHCGKGKVRVSLVTKSEPYRPHPHDLVGKDCRDGYYEVEFGPERRVIAFQNLGIQCV
RRREVKDAIIQRMTRGINPFSVPREQLLQTEEYDLNVVRLCFQVFLQDESGQFSIALNPI
VSNPIYDNRAPNTAELRICRVNKNSGSVKGGDEIFLLCDKVQKDDIEVRFFCQSWEAKGS
FSQADVHRQVAIVFRTPPYYTTSITTPVTVRMQLRRPTDQEVSEPMEFRYLPDDKDPYGC
QEKKRRREDLMKSFSSFQHFNPMNRPKVIPQTSVMSQFIKKEPQNAFTSHVNSGLVRQHG
YPYQSGTQRPMMHHSQPLQPSAMQVNHWQANPNLSLDSIRMSTSVSNTTVSHSNGASMQQ
QLHSSSAYTGTGESTGNNSLPQLSVGDLACLDADPQGVVAAAMGQIRQENQGPFGRKATA
ASDQVMMQSTWGNTVQQSCTASMNGGGGFPFMENFEGDFIQNLLGNQVSTSLPKQEQPVA
MTVQAPSASATADCQQSYTTLHSCSANNSSAQEALRQVVGKAANGQSTIDQDALWYFQDQ
AQL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggatgtccatttgcttccattacatggagatccacacatggtggttgaaccaagcgtc
cagatttttgagcagcccagacagagaggcatgcgcttcaggtacaagtgtgaagggcgt
tctgcaggcagcatcccaggagacaagagctcagacaacaacaggacctaccccagcatc
cagatcctcaatcactgcggaaagggcaaggttcgcgtgtcactggtgaccaaaagtgag
ccttaccggccacatccacatgaccttgtgggcaaggactgccgagacggctactatgag
gtggagttcgggcctgagcgcagggtcattgcctttcagaacctgggcatccagtgtgtc
cggcgacgggaggtgaaggacgccatcatacagcgcatgactcgcggcatcaaccccttc
agtgttccacgagagcagcttctacagacagaagagtatgacctgaacgtggtgcgtctt
tgcttccaagtgttcctacaggacgagagtggtcagttcagcattgccctgaaccctatc
gtctccaaccccatctacgacaacagagcccccaacacagcggagctgcgcatctgccgt
gtcaacaagaacagcggaagcgtcaagggtggcgatgagatcttcctgctctgtgacaaa
gtccagaaagacgatatcgaggtgcgcttcttctgtcaaagctgggaggccaagggtagt
ttctcgcaggcggacgtccaccgtcaggtggccatcgtgttccgaacgccgccctactac
accacatcgatcaccacgccggtgactgtgcgtatgcagctgcgacgccccaccgaccag
gaggtcagtgagcccatggagttccgctacctgccggacgacaaagatccttatggctgc
caggagaagaagaggaggagggaagacctgatgaagagtttctccagtttccagcatttt
aatccaatgaatcgacccaaggtcattccacagaccagcgtgatgtcccaatttattaaa
aaggaacctcaaaatgcattcaccagccatgtcaatagtggtttggtgagacaacatggc
tacccctaccagtctggcactcagcgccccatgatgcatcactcccagccactgcaaccc
tccgccatgcaagtcaaccactggcaagcgaaccccaaccttagcctggacagcatccgc
atgagcacgtctgtctcgaacacaactgttagccacagcaacggggctagcatgcagcag
cagctgcactcaagctcagcctacactggcacgggtgaaagcaccggcaacaacagcctc
cctcagctcagtgtgggtgacctggcctgcctggatgctgatccccagggcgtcgtcgcc
gccgctatgggtcagatccgacaagagaaccagggtccatttggccgaaaggccacagca
gcttccgaccaggtgatgatgcagtccacctggggcaacactgtgcagcagtcctgtact
gcctccatgaacggtggcggtggctttcccttcatggagaacttcgaaggggacttcata
cagaacctcctcgggaaccaggtgagcaccagcctcccaaagcaggagcagcccgtggcc
atgacggtccaggcaccctccgcctccgccacagcagactgccagcagtcctacaccacc
ctgcactcctgctccgccaacaacagcagcgctcaagaggccttgaggcaggttgtgggc
aaggctgccaatggccaaagcaccatagaccaagacgccctgtggtacttccaagaccag
gcccagctgtag
DBGET
integrated database retrieval system