Alosa sapidissima (American shad): 121685386
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Entry
121685386 CDS
T11137
Symbol
abch1
Name
(RefSeq) ABC transporter G family member 23 isoform X1
KO
K25167
ATP-binding cassette, subfamily H
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asad02000
]
121685386 (abch1)
Transporters [BR:
asad02000
]
ABC transporters, eukaryotic type
Other subfamilies
Other ABC transporters
121685386 (abch1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
ABC2_membrane
AAA_21
AAA
Rad17
AAA_22
RsgA_GTPase
AAA_23
NB-ARC
ATPase_2
MobB
ABC2_membrane_2
nSTAND_NTPase5
NACHT
ATP-synt_ab
AAA_19
AAA_14
TsaE
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
121685386
NCBI-ProteinID:
XP_041921817
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All DBs
Position
16:13723717..13755649
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AA seq
725 aa
AA seq
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MAGDGTDEEARNSPHESTAMQERCTEGNMRSDLEAPASPGIEGAAIRCRDVCRSYGKLKV
LNSLNLTVPQGQIYGLLGPSGCGKTTLLKCIVGTLKISRGNITVLGKPPAFPGHDVPGRM
VGYMPQDIALYSEFTISDTLWFFGRIHGLTSKETQARMDFLIDFLDLPQKNSLVRNLSGG
QRRRVSLGAALLQNPRLLILDEPTVGVDPVLRAKIWQHLVDIVRGGQVSVIITTHYIEEA
RQATTVGLMRGGQLLAEAPPETLMEQRNSLTLECAFLQLCEDSDQMVSKQESSSEGKLMV
DSQTPEAYKDESRPILSSGKSPSPADEVPRFTADWKVRVWHVVPKWRNVAALVIKTLVRM
KRMPGSLCFQFLLPVIQISLMCLCIGGDPKGIQVAVVNNETSTHSFSRSLLSFLDNSSII
QVNLSHAEAFAGIHNGEYWGVIEFSKNFTSYLTKRMLNPRSSRDVVDGGSVHVWLDLTNR
QIAIMLQKKLHDAFEGFVQSKLGSMAYMVAPPIKFEEPIYGSKNTDFTTFVTPGAILSIT
FYLAVGLTALSFVLERKEGLLDRCWVAGVSSLETMLAHLFSQLLVISVQIILMLLFILLV
FKIPNEGSLALVVSLIILQGVTGISFGLVISSAIDDEQSANQAALGVFYPNLIISGVIWP
VECIPYPLRYLSLALPQTYASEALRCIMYRGWGLTRLMVWRGFAVTLGWNTFFLILATVI
LKLRS
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggccggggatggcactgatgaagaggcgcgaaattcaccccacgaaagcacggcgatg
caggaaaggtgtacagaaggaaatatgaggagcgatctggaggcccctgcatccccggga
atagaaggtgccgccatcaggtgtagggatgtgtgtcgctcgtatggcaaactgaaagtc
ctgaacagtctcaacctgactgtgcctcaaggacagatctatggcctcctgggacccagt
ggttgtgggaagaccaccctgttgaaatgtattgtgggaaccctcaagatctcccggggc
aacatcacggtcctgggcaagcccccggcgttccctggccacgacgtccctggcaggatg
gttggctacatgccccaggatattgccttgtacagtgaattcaccatcagcgacactcta
tggtttttcggccggatacatgggctcacttccaaagagacacaggccagaatggacttc
ctcatcgatttcctggatctgccacaaaagaacagccttgtcagaaatctcagtggtggg
caaaggagaagagtgtctctcggagcggcgctgctgcagaacccccgtctgttgattctg
gacgagcccacagtcggggttgacccagtcctgagggcaaagatttggcagcatcttgta
gacatcgtaaggggagggcaggtgtcggtcattataaccacgcattacattgaggaggcc
agacaagccaccactgtgggtctgatgcgaggtgggcaactacttgctgaggctccacct
gagaccctcatggagcagcgcaactcactgacgctggagtgtgccttcctgcagctgtgt
gaggattcagaccaaatggtgtctaagcaggagagcagctctgaggggaagctcatggtg
gacagccagactccagaggcttacaaggacgagagccgccccatcctcagctcagggaag
agcccctcaccggcagatgaagtgcccagatttacagcggactggaaggtgagggtttgg
cacgtggtgccaaagtggcggaacgttgctgctttggtgattaagacactggtgcggatg
aagaggatgccagggtccctgtgtttccagttccttttgcccgtcatccagatctctctc
atgtgcttgtgcatcggcggggatcccaaaggcattcaggtggccgtggtgaacaacgaa
accagcacacactcattcagccgatccctcctctccttcctggacaactccagcatcatc
caggtcaacctgtcccatgctgaagcttttgctggcatccataatggagaatattgggga
gtcatagagtttagcaaaaacttcactagttacttgaccaagagaatgctgaacccccgg
agttcaagagatgtggtggatggtggttctgtgcatgtctggttggacctaaccaatcgt
caaattgcgataatgctgcagaagaagcttcatgacgcctttgagggatttgtccagtca
aaactgggtagtatggcttatatggtagctcctcctattaagtttgaggagcccatttat
ggcagcaagaatacagacttcaccaccttcgtaactcctggagctattttgagtattact
ttctatctggctgtaggcctgactgctttgtcgtttgtgctggagaggaaggaaggcctg
ctggacaggtgttgggttgcaggtgtaagctccctagagaccatgcttgcgcacctgttc
tctcagctcctggtcatcagcgtccagatcatcctgatgctcctcttcatcctcctcgtc
ttcaaaattcctaatgagggatctctggccctggtcgtctctttaattattctgcaaggg
gtgacaggaatctccttcggattggtcatctcatctgccatcgatgacgagcagtctgcc
aaccaggctgccctcggtgtcttttaccccaatctcatcatcagtggagtgatctggccg
gtggagtgcatcccctaccccctgcgctacctcagcctggccctgcctcagacctacgcc
tccgaagccctgcgctgcatcatgtacagaggatggggtctcacacgactaatggtatgg
agaggtttcgccgtcactctgggctggaacaccttcttcctcatcctcgccacagtcatc
ctcaagctgaggtcgtga
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