Alosa sapidissima (American shad): 121685475
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Entry
121685475 CDS
T11137
Symbol
lrit1a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asad04990
]
121685475 (lrit1a)
Domain-containing proteins not elsewhere classified [BR:
asad04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121685475 (lrit1a)
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_1
Ig_3
ig
fn3
LRR_14
Ig_VEGFR-1-like_5th
Ig_2
LRR_5
C2-set_3
Motif
Other DBs
NCBI-GeneID:
121685475
NCBI-ProteinID:
XP_041921973
LinkDB
All DBs
Position
16:32347837..32350929
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AA seq
640 aa
AA seq
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MFLTSVLSFLVVIAGLPLVWTSCPSQCSCFYHNLSDGSRARSVICNDPEISLVPASFPVD
TSKLRIEKTAIKRIPGEAFNYLANLEFLWMSFNALSSVNPDSFRGLYSLEELRLDGNALS
AFPWESLIDLPSLRLLDLHNNQISSIPSEATLYIKNLTYLDLSSNSLQTVPSEVLSTWLT
VKPLPGADSKMILGLHDNPWVCDCRLYDLVQFQKSPSLLVAFIDTRLRCADPESVSGVLF
SDAELRKCQGPRVHTAVARVRSPVGNNVLLRCGTIGIPIPELAWRRADGRPMNGTVEQES
SKEGIVWSILSVPAVSYRDSGKYICKATNYAGSAEAVISLMITESPKTENQTASPKKPKG
KKPNTLLKAAYQEKLVARYVSPTTTPAIRLIEPTRYTGPYPGERYSATASEATVQTTGPD
GLLETNLSNLAANTSSLQQDPDRIVRSVKVIGDTDYTVCLNWRAPKAKNTTAFSVLYAVF
GERDMRRINVNPGNNRITIEGLVPKTKYIACVCVKGLIPKKEQCVIFSTDVAAIANGTQK
LINVVVITVACVIAVPLTVIVCCGALKRKIQKLLGKNSKEIQDSYVTFETLSPGTKAKGL
EGEYLTRLNPEESNRLLSARSSLDSELTAKIEGQPNEYFC
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttcctaacgtctgttttaagtttcctggtagtgatagctggattgcccctcgtttgg
acttcttgtccttcacagtgcagttgtttttaccacaacttgagtgatggatccagggct
aggagcgttatttgcaatgatccagagatttcattggtgcctgccagctttcccgtcgac
acatctaagcttaggatagagaaaactgccatcaaaagaataccaggagaagcattcaac
tacctcgcaaatttggaattcctctggatgtcttttaacgcactatcctcggtcaatccg
gacagcttccgtggtctgtacagcctggaagagctgagactagatgggaatgctttatca
gcatttccgtgggaatcactaattgacctacctagtctgagactccttgatttgcataac
aaccagatatcatcaattccttctgaggcaacattatacattaaaaacctgacctatctt
gacctctctagcaacagtttacagactgtgccatcagaagttctttctacttggttaaca
gtaaaacctctcccaggggcagattccaaaatgatcttaggtcttcacgacaacccatgg
gtttgtgactgccgtctgtatgatctggtccagttccagaaatccccatctctactggtg
gcatttattgacactcgcttgcgctgtgctgaccctgagagtgtctcaggtgtactgttt
agcgacgctgagctgagaaagtgccagggccccagagttcacacagctgtggctcgagtc
cgaagcccggtgggcaacaatgtcctgttgcgctgtggcaccattggcatccccattcca
gagcttgcctggagaagagccgatggaaggcccatgaatgggacagttgagcaagagagt
tcaaaggagggaattgtgtggtcaattttaagtgttcctgctgtttcatatcgagactct
gggaaatacatctgcaaagcaacaaactatgctgggagtgcagaggccgtcatttctctg
atgataacagagtccccaaagacagaaaaccaaacagcgagtccaaagaaaccaaaagga
aagaagccaaacactttgctgaaagcagcctatcaggaaaagcttgttgcaagatatgtg
tcaccaactaccactccagcaattcgacttatcgagccaacgcgttacacaggcccctac
cccggggagagatacagtgccactgccagtgaggctactgtccagaccactggtccagat
gggttgctggaaaccaacctgagcaatcttgctgcgaacacgtcgtccctgcaacaagat
ccagaccgaatagtgcgctctgtgaaggtcatcggtgatacagactacactgtctgtctg
aattggagagccccaaaggccaaaaacaccactgcattcagtgtgctgtatgcagtattt
ggggagagggacatgcgcagaattaatgtcaacccaggcaacaacagaattaccattgag
ggcttggtgccaaagacaaaatacattgcctgtgtgtgcgtcaagggactgatccccaaa
aaagagcaatgtgtaatcttctcaacagatgtggcagccatcgctaatggaacccaaaag
ctcattaatgtagttgtaatcacggttgcttgtgtgatagcagtaccactaacagtgata
gtttgttgtggagcactgaagaggaaaatccaaaaattactgggaaaaaattcaaaggaa
attcaagactcttatgtcacatttgagactctttcccccggtacaaaagccaaaggcctt
gaaggggaatacctgaccaggctaaatccagaggaatcaaatagacttctgtcagccaga
tccagcctggattctgaattgactgctaaaatagagggacagccaaatgagtacttttgc
tga
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