Alosa sapidissima (American shad): 121685555
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Entry
121685555 CDS
T11137
Symbol
gbf1
Name
(RefSeq) LOW QUALITY PROTEIN: Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121685555 (gbf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121685555 (gbf1)
Membrane trafficking [BR:
asad04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
121685555 (gbf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121685555
NCBI-ProteinID:
XP_041922084
LinkDB
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Position
16:complement(3308927..3412639)
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AA seq
1812 aa
AA seq
DB search
MVDKHIYIVQGEIATVVGAIKRNSRTTHTPLDEEQDPLLNSFSHLKEVLNNIKALSDVEP
NVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDSNHEGAAEGIENMADAVTHARF
VGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKSA
EHTLVDMVQLLFSRLPQFKEEAKSFVGTNMKKIPGCLLEPHDVIGAEQLKPTNQTGLERA
YNILWKNKRVQLKMRAGGMSESSKWKKQKRSPRPPHHMVRSASGSVDASSNSQSGLPYVE
QSGLPVSDSVPSSMSSPTTDSGLDSGSKTTSREDLSDLEQASSTATTPLSPSASESCAPD
TQCDVERAQSASVESIPEVLGDRDSLADQSDSASVHDMDYVNPRGVRFTQSTQREGAALI
PYGLPCLRELFRFLISLTNPHDRHNSDVMMHMGLQLLTVALEASHIAPYQSLLVLVKDEL
CRHLFQLLSVDRINLYAASIRVCFLLFECMRGHLKFQLEMYLKKLMGLITSENPKLPYEM
KEMALEALVQLWRIPSFVTELYINYDCDFYCSNLFEDLTKLLSKNAFPVSGQLYTTHLLS
LEALLTVIDSTEAHCQAKVLNSSAQQDQSETLTAEEEGSVSTSADALKVDGTLSGTTNGQ
TAATEATPICPPTSGHLMAEKMKLGRQDQEEADTEKKTPKKPQRFSSCLPDSQELNDIKI
KKKLLITGTEQFNQKPKKGIQFLQEKGLLSSPMDNNQVAQWLRENPRLDKKMIGEFVSDR
KHMELLDSFVNTFQFQGLRIDEALRLYLEAFRLPGEAPVIQRLLETFTDNWHKVNGSPFM
TNDAGFALAYAVIMLNTDQHNHNVRKQNIPMTVEQFKKNLKGVNGNKDFDQDMLEDIYNA
IKTEEIVMPDEQSGLVKENYVWSVLLHRGATSEGLFLATPPASYDHDLFSMTWGPTIAAL
SYVFDKSLDDTIIQKAIAGFRKCAMISAHFGFSDVFDNLIISLCKFTTLSSESVENLPTV
FGSNLKAQVAAKTVFSLAHRHGDILREGWKNIMDSMLQLFRAELLPKPMVEVEDFVEPNG
KISLQREETPSQRWIICVCVWQALISVTPDEETYDEEDAAFCLEMLLRIVLENRDRVSCV
WQTVRDHLCHLCVHANESCFLVERAVVGLLRLAIRLLRREDISSQVLLSLRLLLMMKPPV
LSRVSREVAYGLHELLKTNAANIHSTDDWYTLFSLLECIGAGVKPPAALQMTSGNTDNDT
GAQSDSEVSSHHPSEVSVDRGYTSDSEIYNEQHGKSRLPRATTDVDVANSGWLVVGKDDL
DSSKVGVGGSKPLLSPLVNQYSLTLGQDMGLHDTKSLIKCVESLSFIVRDAAHVTPDNFE
LCVKTIRVFVEASLNGGYRTHEKKKSHKYDKSSRLRKKPREKDVASRRTKASQRLSRSHS
DDEEDEGVPASYHTVSLQVSQDLLDLMHTLHTRAASIYSSWAEEQRHLEAAGRKIEADSH
TLWSSCWCPLLQGMAWLCVDARRQVRMQALTYLQRALLVHDLQTLDAAEWESCFNKVLFP
LLTKLLDNISPADVGGMEETRMRACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYM
HAGSSDLLLEAIPESLKNMLLVMDTAGIFLSSDSRTGYSALWEITWERIDCFLPHLREEL
FKQAVMPEPVPSVPVEPPQPPAPSPPPTEPKAPSRPASPQDNTAPPSANGTDRSSPVPPS
TPXPVKMSPPESPPSLSQSPLILQPLASPLQVGVPPMSLPIILNPALIEATSPVPLLSTQ
RASDPADPTEVK
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaaacatatctacattgttcaaggggagatcgcaacggtagtgggtgccatc
aagaggaactccaggaccacacacactcccctggacgaagaacaggaccctcttctcaac
agcttcagtcacctgaaagaagtcctgaacaacattaaagctctgtctgatgtggagcct
aatgtcttcctgaggcccttcctggaagtagtgcgctccgaggacaccactggaccaatc
acgggcctcgctctcacctcagtcaacaagttcctctcctatggccttatagactccaat
catgaaggggcagccgagggcatcgagaacatggccgacgccgtcacacacgcacgcttc
gtggggaccgaccccgccagtgacgaggtggtgctgatgaagatcctacaggttctaagg
acactgctgctaacgcctgttggagcccatctgaccaatgagtctgtgtgtgagatcatg
cagtcatgcttcaggatctgctttgagatgagactcagcgagctcctgaggaagtcggcg
gaacacacactggtggacatggtacagctgcttttctccagattgccccagtttaaggag
gaggccaagagcttcgtcgggaccaacatgaagaagatcccaggctgtctcctggagcct
cacgatgtgattggtgcagagcagcttaagcccaccaatcagacaggcctagagagggct
tacaatatcttatggaaaaacaaacgtgtgcagttgaagatgcgtgcagggggtatgagt
gagtcgtctaaatggaagaagcagaagcgttccccccgcccccctcatcacatggtccgc
agcgcgtcaggatcagtagatgccagcagcaacagccaatcaggcttgccgtatgtagag
cagtcggggctgccggtgtcggacagtgtgccgtcgtccatgtccagccccactacagac
agcggcctggactctggctccaagaccacctcccgagaggacctctccgatctggagcag
gccagctccacggcaaccactcccctcagcccctcggcctcagagtcctgcgcacctgac
acacagtgtgacgtggagcgtgcccagtcggcttcagtagagtccatcccggaggttttg
ggtgatcgggactcattggctgaccaatcagactctgcctcagtccacgacatggactac
gtcaacccacgaggcgttcgcttcacccagtccactcagagagagggtgcagctctgatt
ccctacgggctaccgtgtctgagggagctctttcgcttcctgatctcgctgaccaacccg
cacgaccgccacaactctgacgtgatgatgcacatgggcctgcagctgctcacagtggcc
ctggaggcctcgcacatcgccccctaccagtcactactggtactggtcaaagacgagctc
tgcaggcatctattccagttgctgagtgtggaccggattaacctctacgctgcctccatc
agggtgtgtttcctgctcttcgagtgcatgaggggacacctcaagttccagctggagatg
tacctgaagaagctgatgggcctgatcacgtcggagaaccccaagctgccgtacgagatg
aaggagatggcgctggaggccctggtgcagctctggaggatccccagcttcgtcaccgag
ctctacatcaactacgactgtgacttctactgctccaacctctttgaggacctcaccaag
ctgctctcaaagaacgccttcccggtatctgggcagctctacaccacacacctgctctct
ctggaggcgttgctcaccgtgattgacagcactgaggcccactgccaagccaaggtgctc
aacagctctgcccagcaggaccaatcagagaccttaacggccgaggaggaggggtcagtc
agcacaagcgctgatgccttgaaggtggacggaactctgtcaggaaccaccaatgggcaa
acagcagcaactgaggccacgcccatctgcccgcccaccagtggccacctgatggcagag
aagatgaaactgggacgacaagaccaggaggaggccgacaccgagaagaaaacccccaaa
aagccccagaggttctccagctgcctacccgactcccaagagctcaacgacatcaagatc
aagaagaagctgctgatcaccggtacggaacagttcaaccagaagcccaagaagggcatc
cagttcctgcaggagaagggcctgctgagcagccccatggacaataaccaggtggcccag
tggctccgtgagaacccccgcctggacaagaagatgatcggagagttcgtcagcgaccgc
aagcacatggagctgctcgacagctttgtcaatacgttccagttccagggcttgcgtata
gacgaggcgctgcgcttgtatctggaggccttccggctccctggcgaagcaccggtcatt
cagcgcctcctagaaaccttcaccgacaactggcataaagtgaacgggtctcccttcatg
accaatgatgctggctttgctctggcctacgccgtgatcatgctcaacactgaccagcat
aaccacaacgtccgcaagcagaacatccctatgactgtggagcaattcaaaaagaacctg
aagggcgtcaacggcaacaaagacttcgaccaggacatgctggaggacatctacaatgcc
atcaagactgaggagattgtgatgccggacgagcagtcgggcctggtgaaggagaactac
gtgtggagcgtcctgctgcaccgcggcgccacgtccgagggcctcttcctggccacgccg
cccgccagctacgaccacgacctcttcagcatgacctgggggcccaccatcgccgccctc
tcctacgtcttcgacaagagcctggacgacaccatcatacagaaggccatcgctggcttt
aggaaatgtgcgatgatctcggctcactttggcttcagtgatgtctttgacaacctcata
atttccctctgcaagttcaccaccctcagcagcgagtcggtggagaacctgcccacggtg
ttcggcagtaatctgaaggctcaggttgcagccaagacggtgttcagcctggcccatcgc
catggcgacatcctgcgcgagggctggaagaacatcatggactccatgctgcagctgttc
agagccgagctgctgcccaagcccatggtcgaggtggaggactttgtggagccgaatgga
aagatctctctgcagagggaggagacgccatctcagagatggattatctgtgtgtgtgtg
tggcaggctctgatctctgtgacgcctgatgaggagacgtatgatgaggaagatgctgcg
ttctgcctggagatgctgctacggatcgtcctggagaaccgggaccgagtgtcgtgtgtg
tggcagacggtgagggatcacctgtgccatctgtgtgtccatgccaacgagagctgcttc
ctggtagagagggctgtggtgggcctccttagactggccatccgcctactcaggagagag
gacatcagctcacaggtcctgctgtctctgcgtctgctgctgatgatgaagcctcccgtg
ctgtcccgtgtgagtcgagaggtggcctacggtctgcacgagctgctcaagaccaacgcc
gccaacatccacagcaccgacgactggtacacactcttctccctgctcgagtgcatcggg
gccggggtcaagccgcccgccgcgctgcagatgacctctggaaacaccgacaacgataca
ggagcccagtcggacagcgaggtcagctcccaccaccccagtgaggtctcggtggaccgg
ggctacacgtccgactccgagatctacaacgagcagcacgggaagagccgcctgccccgc
gccaccacagacgtggacgtggccaacagcggctggctcgtggtgggtaaggacgatctg
gacagcagtaaggttggtgtgggcggctccaagcccctgctgtcccccctggtgaaccag
tacagcctgaccctgggccaggacatggggctgcacgacaccaagtccctcatcaagtgt
gtggagtcgctgtccttcatcgtgcgcgacgccgcccacgtcacccccgacaactttgag
ctctgcgtcaagaccattcgcgtttttgtggaggccagtctcaacggaggctaccgcacc
catgagaaaaagaagagccacaagtacgataagtcgagtcgtctgcggaagaagcctcgc
gagaaggatgtggcctcccgccgcaccaaggccagccagcggctgtcccgttcccatagc
gacgacgaggaggacgagggtgtgccggccagctaccacacggtgtctttacaggttagt
caggacctgctggacctgatgcacacactgcacacgcgcgctgccagcatctacagctcc
tgggccgaggaacagcgccacctggaggcagccggcaggaagatcgaggcagactcccac
acactctggagcagctgctggtgtcctctgttgcaaggtatggcgtggctgtgtgttgat
gcgaggcggcaggtgcgcatgcaggccctgacctacctgcagagggcgctgttggtgcac
gatctgcagacactagatgctgctgagtgggagtcctgctttaacaaggtgctgtttccc
cttttgaccaagctgctggataacatcagtcctgctgacgtagggggcatggaggagaca
cgcatgagggcatgcacgctactctcaaaggtcttcctgcagcatttgtctcctctgctc
tccctgcccacctttgctgctttgtggctcaccatcctggacttcatggacaagtacatg
cacgccggctccagtgacctgctgctggaggcgatccctgaatctctgaagaacatgctg
ctggtaatggacacagcaggcatcttcctgagctccgattctcgcaccggctactcggca
ctctgggaaatcacctgggagcgcatcgactgcttcttgccacacctcagagaggagctt
ttcaagcaggctgtcatgcccgagcctgtgcccagcgtgcctgtagagccccctcagcct
ccagccccttcccctccccccactgagcccaaagccccaagccggccagcctccccccag
gacaacacagccccacctagtgccaatggtacggacagatcgtccccagtgcccccctcc
accccgnncccagtgaagatgtcccctccagagtcgcccccgtctctcagccaatcaccg
ctcatcctgcagcctctggcctcgcccctacaggtcggcgtgccgcccatgtccctgcca
atcatcttaaatcccgccctcatcgaggccacctcccctgttccccttctttccactcag
cgagcatctgaccccgccgaccccaccgaggtcaagtaa
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