Alosa sapidissima (American shad): 121685670
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Entry
121685670 CDS
T11137
Symbol
abcb10
Name
(RefSeq) ATP-binding cassette sub-family B member 10, mitochondrial
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
asad Alosa sapidissima (American shad)
Pathway
asad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121685670 (abcb10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asad02000
]
121685670 (abcb10)
Transporters [BR:
asad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
121685670 (abcb10)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
AAA_29
Zeta_toxin
AAA_21
AAA_25
AAA
RsgA_GTPase
AAA_33
DUF3987
DUF87
nSTAND1
AAA_30
AAA_5
AAA_14
AAA_7
Motif
Other DBs
NCBI-GeneID:
121685670
NCBI-ProteinID:
XP_041922257
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All DBs
Position
16:complement(10679134..10695636)
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AA seq
713 aa
AA seq
DB search
MKLIFKLTKCTAVNLLKRRNTHCGQNRTYWVESTVLKGSWKRREYVVSRPMPLSHLESVV
TSPLPCIRLGEVSAPRDLWRLSTHKLNCYSTSTDSRPATQDGVESKDNAIKTGKNLMPVP
SEDIRRLLHLAHPERWRLSTAMGFLMASSAVTMSAPYFLGKVIDTIYSSSTADFSSSLTS
LCMMLGGVFIFGGAANAARVYLMQISGQQIVRNLRESLFSSIIRQEVGFFDKTRTGELIN
RLSSDTTIVGRSLTDNLSDGLRSVAQAGVGVSMMFYVSPSLAAFVLMIVPPMAGMAVIYG
RYLRSISKRTQDSLAEATQLAEERISNMRTVRAFGKEWSELEKYVGKINYVFQLAKKEAV
LRAGFFGMTGLSGNMMILAVLYKGGLLTASEHMTVGQLSSFLMYTFWVGISIAGFSSFYS
ELMKGFGAGARLWELVDRRPEFPLDEGTVLRPEQFKGQLQFHNVSFAYPTRKDAPIFQNL
SLLVPAGTVMAVVGPSGSGKSTLVSLLLRLYDPESGMITIDGRDVRELNPCWLRSHIGTV
SQEPVLFSSSIAENIAYGAVDPKSVTAEDIQRAAQIANAYDFVQGFPKGFDTIVGEKGIL
LSGGQKQRIAIARALLKNPKILLLDEATSALDAENEFLVQEALERLMAGRTVLIIAHRLS
TIQNADNVAVLDQHHVVECGRHAELLANRDGLFRKLMEKQAFMQDEQKQALYE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcatatttaagttgacaaaatgcacagcagtgaacctactgaagcgcaggaat
acacattgcggtcaaaatcggacgtactgggtggaaagtacagttcttaaggggtcatgg
aagagacgtgaatatgtagtttcgcgtcccatgccactttctcatttagagtctgtggtc
acgtcgccattgccctgtatccgacttggagaggtttcagcaccccgggatctatggaga
ctctcgacgcacaaactgaactgttatagtacctccactgattcgaggccagccactcaa
gatggggttgaaagtaaagacaacgcaatcaagactggtaaaaacctcatgccagtacca
tcggaagacatcagaagactattgcacctggcgcacccggagcgatggcgactgtcgacg
gccatgggtttcctgatggcctccagtgctgtaaccatgtcggctccttatttcctggga
aaggtcatcgacaccatctattccagcagcaccgcagacttcagttcgtccctgacctcc
ctgtgtatgatgctgggtggagtgttcatctttgggggagctgctaatgctgcacgcgtc
tacctcatgcagatctccgggcaacagattgtgcgaaatctgcgggaatctctcttctcc
tccatcatcagacaggaagtcgggttctttgacaagactcgcactggggaactcatcaac
cgcctgtcctcagataccaccattgtgggacgctcactgacggacaacctctcagatggc
ctgcgctcggtcgctcaggcgggtgtgggtgtcagtatgatgttctacgtgtctcccagt
ctggctgcgttcgtgctgatgatcgttccacccatggccggcatggcggtgatctatggc
agatacctgcgctccatctccaaacgcacccaggactctttggctgaggctacgcagctg
gctgaggagcggatcagtaacatgagaacggtgcgagcgttcggtaaggagtggagcgag
ctggagaagtatgtggggaagatcaactacgtgttccagctggccaagaaggaggctgtg
ctgagagccggctttttcgggatgactggtctcagtggcaacatgatgatcctggcggtg
ctgtacaagggcggcttgctgaccgccagtgagcacatgactgtgggacaactctcctcc
ttcctcatgtacaccttctgggtgggcatcagcattgcaggtttcagctccttctactca
gagctgatgaaaggctttggtgctggagccagactgtgggaacttgtggacagaagacca
gagttccccctcgatgagggcacagtgctgagacctgagcagtttaagggccagctgcag
ttccacaacgtgtcctttgcctacccaacccgcaaggacgcgcccatcttccagaacctg
agtctcctggtgccggctgggacggtcatggctgtggtcgggccaagcgggtcgggcaag
tccaccctggtctccctgctgttgcgtctgtatgacccagagtcgggcatgatcactatt
gatggcagagatgtgcgggagcttaatccttgttggctgaggagtcatatcggaacagtc
agtcaggagcccgtgctcttctccagctccatagctgagaacatagcctatggtgcggtg
gatcccaagagtgtcacagctgaggacatccagcgtgctgctcagattgccaatgcctat
gactttgtccaaggcttccccaaaggcttcgacaccatagtgggggagaaaggaattctt
ctgtcaggtggtcagaagcaaagaattgccattgcaagagccttacttaagaaccccaag
atactcctgcttgacgaagccacaagtgcgctggatgcggagaacgagttcctggtgcaa
gaggcgctggagcgtctgatggcgggccgcacggtgctcatcatcgcccaccgcctctcc
accatccagaacgccgacaacgtggccgtgctggaccagcaccacgtcgtcgagtgcggc
cgccacgccgagctgctggccaaccgcgacggactcttccggaagctcatggagaagcag
gccttcatgcaggacgagcagaagcaggccctgtatgagtga
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