Alosa sapidissima (American shad): 121685868 Help Entry 121685868         CDS       T11137                                  Name (RefSeq) toll-like receptor 4   KO K10160   toll-like receptor 4 Organism asad  Alosa sapidissima (American shad) Pathway asad04145   Phagosome asad04217   Necroptosis asad04620   Toll-like receptor signaling pathway asad04621   NOD-like receptor signaling pathway asad05132   Salmonella infection Brite KEGG Orthology (KO) [BR:asad00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     121685868   09143 Cell growth and death    04217 Necroptosis     121685868  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     121685868    04621 NOD-like receptor signaling pathway     121685868  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     121685868  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:asad04131]     121685868   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:asad04054]     121685868    04090 CD molecules [BR:asad04090]     121685868    00536 Glycosaminoglycan binding proteins [BR:asad00536]     121685868 Membrane trafficking [BR:asad04131]  Endocytosis   Phagocytosis    Toll-like receptors     121685868 Pattern recognition receptors [BR:asad04054]  Membrane-bound pattern recognition receptors   Toll-like receptors    121685868 CD molecules [BR:asad04090]  Proteins   121685868 Glycosaminoglycan binding proteins [BR:asad00536]  Hyaluronan   Cell surface receptors    121685868 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LRR_8 TIR LRR_4 TIR_2 LRR_14 LRR_5 ThsB_TIR LRR_R13L1-DRL21 LRR_EndoS Motif Other DBs NCBI-GeneID:  121685868 NCBI-ProteinID:  XP_041922640 LinkDB All DBs Position 16:21047069..21050038 Genome browser AA seq 801 aa AA seqDB search MNEDTEACLEVIPSLQYSCFRRNLSYIPTSIPPSTQHLDFSFNYLTTLQRHMFPRLPLLQ HLDLTRCHIQHIDNEAFFNVRNLSVLILTGNPVKYFGRSSINVLEKIHMLVLVNIDLLSM DSLNLQNLTSLKELKVGTNRLFSLALPTYAVSFKDFSILDLHTNNISVIRAVHTSVLRQM SRNLTLILSRNAISFIESGAFNGLYLGEINLLDTISFTTAREALGGLSGLNVKKLKIGHF TEAGRIQINPDSLDSLCFINFEEIYFRQSYYFNLPSHILLCMRNSTKIVLTKVGIVNREH VYFPNLKEIVVVKGKIARLPDLLLSHQYNLKKLVISNNLRPPEFKSFADLPSLDYIDLSH NNFIMNCCDDEFIGVPKLRYLNLSENAKVKIRVFGLLNQPSLEILDLHGTEVEVEHDSAV MQNLKSLKTLNLSNSKITFKSKGFFYGLSGLNELKIAGNSFAKGIFGQLFLNLTVLELLD ISNCAIEDIPLTSFQDLHYLKHLIISGNKLTTMDFLTGLSLSKLKSLHADNNHIASISPN ILQNLPADILVFDLSSNPIECSCSQIVFISWIINHQSVLKDPQLMSCKSSSMNSRVIYFD PTHCVHTNRVIIIASLFAAVIVLLLSALLYKYQFYIHYCFILLRGYRMSRQQECSYDAFV IYSSKDEAWVLDELVENLEKGHPPIQLCLHERDFQAGKSITSNIVDEGIMGSRKVIVVVS QHFLDSSWCQFEFELAQSWLVFRRNASIIIIILEDVEDKKIRRLFGLHKYLKKNTYLKWK GNALSNIRFWARLRKAIIARN NT seq 2406 nt NT seq  +upstreamnt  +downstreamnt atgaatgaggatactgaggcatgcttggaggtcatccccagtctccaatactcatgcttc aggagaaacctgagctacataccaaccagtatccctccctccacacaacatttggacttc agttttaattacctcacaacactgcagagacacatgttcccgagattaccattactacaa catcttgatctcacaagatgtcacatccaacacattgacaatgaggcgttctttaatgta aggaatttgtctgtattgattctcactggaaatccagtgaaatattttggaagaagcagc attaatgttttggaaaaaatacacatgcttgttctagtcaacatcgatctgctctccatg gacagtcttaatttacagaatttaacaagcctaaaggaattaaaagttggaacaaacaga ttattttctttggcccttccaacgtatgctgttagtttcaaggacttctcaatactggac cttcatacaaacaacatatctgtcatcagagctgttcacacttctgttttgcgtcagatg agtagaaatttaactttaatattgtccagaaacgcaatatccttcatagaatctggagca tttaatggcctttatctgggagagatcaatctccttgacacaatctcattcacaactgca agagaagctcttggaggtcttagtggattgaatgtgaagaagttgaaaataggacatttc acagaggcaggaaggatccaaattaatccagattctttggacagcctttgtttcataaat ttcgaggagatatattttcgtcagtcctactatttcaacctacctagtcacatccttctt tgcatgagaaattctacaaaaattgttctgaccaaagttggaatagttaacagggaacat gtgtattttccaaaccttaaagagattgttgttgttaaaggaaaaatagccagactacca gaccttcttctatctcatcaatacaatttaaagaaactggtcatcagtaacaatctacgg cccccagaatttaaaagctttgctgatttgcctagtctagactacattgatctaagtcat aataatttcataatgaattgctgcgatgatgaatttattggcgtccctaaactcaggtat ctaaatctgagtgagaatgcaaaggttaaaattagggtctttggtcttttaaatcagcca tctctagaaatattggatcttcatggcacagaagtagaagttgaacatgattcagctgtt atgcaaaaccttaagagtttaaaaactctcaacctttccaactcaaaaattacctttaaa agcaaagggtttttttatggtttgagtggactgaacgaattgaaaattgctggcaacagc tttgcaaaaggcatttttggccaattatttttaaatctcacagttttggagctccttgac atttcaaattgtgccattgaagacatacccttgacttcattccaggatctacattattta aaacatttgattattagtgggaacaaactgaccacaatggactttctcacaggtcttagt ttatcaaaactaaagtctttgcatgcagataataaccacatagccagcatctctccaaac attcttcagaatctccctgcggatatattggtatttgatttgtcctccaatcccatagaa tgttcctgttctcagattgtatttatttcctggatcattaatcatcagtcagttctaaaa gatcctcaactaatgtcatgcaaatcctcatccatgaactccagagtgatttactttgac cccacacactgtgttcacacgaacagagtgataataattgcatccttatttgcagctgta attgtactcctattgtctgcattgttgtataagtaccagttctatatacattactgcttc atattgctaagaggctacagaatgtctagacaacaagaatgctcctatgatgcctttgtg atctactcaagcaaggatgaagcctgggtgttggatgagcttgtggaaaaccttgagaaa ggacatcctccaattcagctttgcctgcatgagcgagatttccaagcaggaaagtcgatt acctccaatatagtggatgaaggcatcatgggtagccggaaagtcattgtggtggtgtct cagcacttcctagacagctcctggtgtcagtttgagtttgaactggcacaatcctggctt gtcttcaggcgaaatgccagcatcatcatcatcatcttggaagatgtggaagataagaaa ataaggagactgtttggacttcataagtatctgaaaaagaacacctacctcaagtggaag ggaaacgctctaagcaatatccggttctgggctcgtctcagaaaagccattattgctagg aactga

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