Alosa sapidissima (American shad): 121687233
Help
Entry
121687233 CDS
T11137
Symbol
cps1
Name
(RefSeq) carbamoyl-phosphate synthase [ammonia], mitochondrial
KO
K01948
carbamoyl-phosphate synthase (ammonia) [EC:
6.3.4.16
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00220
Arginine biosynthesis
asad00250
Alanine, aspartate and glutamate metabolism
asad00910
Nitrogen metabolism
asad01100
Metabolic pathways
asad01200
Carbon metabolism
asad01230
Biosynthesis of amino acids
Module
asad_M00029
Urea cycle
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
121687233 (cps1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
121687233 (cps1)
00220 Arginine biosynthesis
121687233 (cps1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asad01002
]
121687233 (cps1)
Enzymes [BR:
asad01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.16 carbamoyl-phosphate synthase (ammonia)
121687233 (cps1)
Peptidases and inhibitors [BR:
asad01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
121687233 (cps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
GATase
CPSase_sm_chain
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
Motif
Other DBs
NCBI-GeneID:
121687233
NCBI-ProteinID:
XP_041922838
LinkDB
All DBs
Position
2:complement(20238778..20276060)
Genome browser
AA seq
1499 aa
AA seq
DB search
MTKILTACTVARVTLLKQGWLSGRSRSLVNWKSTRLFSVKAQTAHLVLEDGTRMKGLSFG
KNRSMAGELVFNTGLVGYPEALTDPSYRGQILTLTYPIVGNYGVPNTQELDELGLRKHLE
SDQIHVSGLLVQDYSYEYSHWNSVKSLAQWLEEEGVPALYGVDTRMLTKIIRDKGTVLGK
IEFDGEPVEFTDPNQRNLIAEVSTKEAQIFGKGNPIKVVAVDCGIKHNIIRLLVKRGAEV
HLVPWDQDLMSLDYDGLFISNGPGDPSLARPLIENVRKVLNSDRPQPVFGICMGNQITAL
AAGAHSYKLPMGNRGQNQPVLNVMTNQAFITAQNHGYGIDSQSLPQGWSPLFINANDGTN
EGIMHNSKPVFTAQFHPEAKGGPTDTEFLFDTFISLIKKGKGASIVSVMPPKPDIPPRAK
VSKVLVLGSGGLSIGQAGEFDYSGSQAIKALKEENLKTVLMNPNIASVQTNEVGTKQADS
VYFLPVTPQFVTEVIKTERPDGILLSMGGQTALNCGVELYNSGVLQKYGVKVLGTPVESI
MATEDRQLFSDKLMEINEKIAPSIAVETVADALKAADKIGYPVMLRSAYALGGLGSGLCA
NKDKLEQTARKALAMSSQILVEKSLLGWKEVEYEVVRDISNNCVTVCNMENFDPLGIHTG
DSIVVAPSQTLSNEEYHMLRETALKVVRHLGIVGECNIQYALHPSSLEYCIIEVNARLSR
SSALASKATGYPLAFVAAKLALGIPLPDIKNAVSEKTTACFEPSLDYIVTKIPRWDLDRF
QGMSREIGSAMKSVGEVMAVGRTFEESMQKALRMCHPSVDGFVPHLPLKRAWADEQDLQQ
ELAVPSSTRIFSLAKALHSGMGVDQIHQLTAIDKWFLHKLRRITELEQHLGQYNSFSVPP
EILLKAKQDGFSDRQVGSALGTSEDEARALRLSQNIRPWVKQIDTLAAEYPAVTNYLYCT
YHGQEHDLEFTDQGVMVLGCGPYHIGSSVEFDWCAVSSIRALRQMGRRTVVVNHNPETVS
TDFDECDRLYFEELTLERILDITQQEGCTGCIVSVGGQIPNNLAMPLHLNGIKILGTNPL
QIDRAEERSIFSTILDELGVHQAPWRALSSLEDAFAFANKVGYPCLLRPSYVLSGSAMNV
AYGEEEMKRFLEEAAQVSQEHPVVITKFIRGAREVEVDAVAKTGKVLVHAITEHVEDAGV
HSGDATLMLPTQSISQGALEKIKTATRKIAKAFEISGPFNTQFLVKGNDVMVIECNLRAS
RSFPFVSKTIGVDFINVATRVMVGEPLDESRLPSLENPIIPVDYVGIKAPMFSWPRLRDA
DPVLRCEMASTGEVACFGPNIYSAFLKAMLSTGFKLPQKGILIGIQHSFRPNFLSTAHQL
NEDGFKLYATEGTSAWLNANDVPTTPVAWPTQDENNSTLPSINRLINEGDIDLVVNLPNN
NTRFIKDNFIIRRMAVDHGVPLITNFQVVKLFAEAVKYSSDLDTTSLFHYRERNTTRHS
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagatattaacggcttgcacagtagccagggtaacattactgaagcaaggatgg
ctaagtggcagaagcaggagtcttgtaaactggaagtcaactcgtctgttcagtgtaaag
gcccagactgctcaccttgttttggaggatggcactcgaatgaagggcttgtcctttgga
aagaatcgttccatggctggcgagctagtcttcaacacaggacttgtagggtaccccgaa
gctctgactgatcctagctacaggggccagattttaactctcacgtacccgattgtggga
aactacggcgttcccaatacacaggagctggatgagctgggattgagaaagcatttggaa
tccgaccaaattcatgtgtctgggctgttggtgcaagactatagttatgaatacagccac
tggaactcagtcaaatccttggctcaatggttggaagaagaaggggtgcctgcgttgtat
ggtgtggatactaggatgcttactaaaataattcgggataagggaacagtcttggggaag
attgagtttgatggggagcctgttgaatttacagacccgaaccaacgtaatctaattgca
gaagtctctacaaaagaagcacagatatttgggaaaggaaacccaatcaaagtggtagca
gttgattgtgggatcaaacacaacataatcagacttcttgtcaagcggggagcagaagta
catctggtaccatgggaccaagacctgatgagcctggactatgatggtctgtttatttcc
aatggcccgggggacccttcactagctaggcccctaattgagaatgtccgcaaggtgcta
aatagtgatcggccccagcctgtgtttggcatctgcatggggaaccagattactgctctt
gcggcaggagctcattcctacaagctgcctatgggcaacaggggacagaaccagccagta
ctgaatgtgatgacaaaccaagcctttatcacggcacagaaccatgggtacggaattgac
agccagtcattgccacaaggctggagccctctattcatcaatgccaatgacgggaccaat
gagggtatcatgcataactccaagccggtcttcacagcacagttccacccagaagcaaag
ggaggccctactgacacagagttcctgttcgacaccttcatatcgctcattaagaagggg
aagggggccagcatagtgtctgtgatgcctccgaaaccagacattcctccgagagctaag
gtgtctaaggtgctggtgcttggctctgggggcctctccatcggccaggcgggcgagttt
gactactctggatcccaggctatcaaggccctgaaggaagagaatctcaagacggtgctg
atgaaccccaacattgcctctgtgcagaccaacgaggttggcaccaagcaggctgactct
gtctacttcctgcccgtcaccccacagtttgtcaccgaagtcatcaagacggagcggcca
gacggcatcctgctctccatggggggccagacagctctgaactgcggtgtggagctgtac
aacagcggagtcctgcaaaagtacggcgtgaaggtgttagggacacctgtggagtccatc
atggccactgaggaccggcagctcttctcagacaagcttatggagatcaatgagaagata
gcacccagcatcgctgtggagacggtggcagatgccctgaaggctgcggataagattggc
taccctgtcatgctccgctctgcctacgcactcgggggtctgggctctggcctttgtgcc
aacaaggacaagttggagcagacggcacggaaggctctggcgatgagcagtcagatcctg
gtggagaagtcccttctgggctggaaggaggtggagtatgaggtggtcagggacatctcc
aacaactgcgtcaccgtctgcaacatggagaactttgacccgcttggcatccatacaggt
gactccatcgtggtggcgcccagccagaccctgtccaacgaggagtaccacatgctgaga
gagacggccctcaaggtggtgcggcacctgggcatcgtgggagagtgcaacatccagtac
gcccttcacccctcctctctggagtactgcatcatcgaggtcaacgccaggctctccagg
agctcagcgctagcctccaaggcaactggctaccctctggcttttgtggccgccaaactg
gccctgggcatccctctgccggacatcaagaatgctgtgtcggagaagaccacggcctgc
ttcgagcccagcctggactacatcgtcactaagatcccccgctgggacctggaccgcttc
cagggcatgtcccgggagatcggcagtgccatgaagagtgtgggcgaggtgatggcggtg
ggccgcacctttgaggagagcatgcagaaggccctgcgcatgtgccacccctccgtggat
ggctttgtgccccacctgccactcaagagggcctgggccgacgagcaggacctgcagcag
gagctggcagtgccctccagcacccgcatcttctccctggccaaggcgctccacagcggg
atgggcgtggatcagatccaccaactgaccgccatcgacaagtggttcctgcacaagctc
cgacgcatcactgagctggagcaacacctgggccagtacaacagcttctccgtgcctccc
gagatcctcctgaaggccaagcaggacggcttctccgaccgccaagtgggcagtgccctg
ggcacctccgaggacgaggcccgggcactccggctgagccagaatatccgtccctgggtc
aaacagattgacaccctggctgcagaatacccagcggtcaccaactatctatactgcact
tatcatggccaggagcatgatttggaattcactgaccagggtgttatggtgctgggatgt
ggtccttatcatattggcagcagtgtggagttcgactggtgcgccgtgtcaagcatccgc
gccctgcggcagatgggccggcgcacggtggtggtgaaccataacccagagacggtcagc
acggactttgacgagtgtgaccggctgtacttcgaggagctgaccctggagcgcatcctg
gacatcacacagcaggagggctgcaccggctgcattgtgtctgtgggcggtcagatcccc
aacaacctggccatgccgctccacctgaacgggataaagatcctgggcaccaacccgctc
cagatcgaccgcgctgaggagcgctccatcttctccaccatccttgatgagctcggggtg
caccaggctccctggagagccctcagctcactggaggatgccttcgcctttgctaataag
gttggctacccatgcctgctgcggccatcttatgtgctgagtggctctgctatgaacgtg
gcctacggagaggaggagatgaagaggttcctggaggaggctgctcaggtgtcacaggag
caccctgtggtcatcaccaagttcatcagaggagccagagaggtcgaggtggacgctgtg
gccaaaactgggaaggtgctggtccatgccatcacggagcacgtggaggacgcaggtgtc
cactcaggagatgccaccctgatgctgcccactcagagcatcagccagggggcgctggag
aagattaagactgctacccggaaaattgccaaggcatttgaaatttcagggccgtttaac
actcaatttctggtgaaaggcaatgatgtcatggttattgaatgcaacctgcgagcctcg
cgctccttcccctttgtgtccaagaccatcggcgtcgacttcatcaacgtggccacgcgc
gtcatggtgggcgagcctcttgatgagtcccgtctgccctccctggagaaccccatcata
cctgtggactatgtcggtatcaaggctcccatgttctcctggccccgcctcagggatgct
gaccctgtcctgcgctgtgagatggcctccactggagaggtggcttgcttcggaccaaac
atctactccgctttcctgaaggccatgctctctactggattcaagctcccgcaaaaggga
atcctcataggcatccagcattctttcagacccaacttcctgtccaccgcacaccagctg
aacgaggacggtttcaagctttatgccactgagggcacctccgcctggctcaatgccaac
gatgtgcccaccactccagtggcctggccaacacaagatgagaacaatagcactctcccc
agcatcaacaggctcatcaatgagggtgacattgacctggtggtgaacctccccaacaac
aacacacgtttcatcaaggacaacttcataatccgccgcatggctgtggaccacggggtg
cccctcatcaccaacttccaggtggtcaagctgtttgccgaagcagtgaagtactccagt
gacctggacaccaccagcctcttccactaccgagagcgcaacaccaccaggcacagttag
DBGET
integrated database retrieval system
