Alosa sapidissima (American shad): 121687580
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Entry
121687580 CDS
T11137
Symbol
abcb6b
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family B member 6, mitochondrial
KO
K05661
ATP-binding cassette, subfamily B (MDR/TAP), member 6
Organism
asad Alosa sapidissima (American shad)
Pathway
asad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121687580 (abcb6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asad02000
]
121687580 (abcb6b)
Transporters [BR:
asad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB6, 7 subgroups
121687580 (abcb6b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
MTABC_N
RsgA_GTPase
AAA_16
AAA_22
AAA
SbcC_Walker_B
ABC_ATPase
AAA_21
AAA_29
AAA_14
Zeta_toxin
MMR_HSR1
AAA_33
AAA_18
Motif
Other DBs
NCBI-GeneID:
121687580
NCBI-ProteinID:
XP_041922865
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All DBs
Position
2:complement(33227603..33304091)
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AA seq
651 aa
AA seq
DB search
MASKRSAKGSAIPEAFALTVESKAGDERREGAVKPGSSSTWEGFRRKVCLLVPFLWPKSS
TRLQALVLLCLSLLGLERFLNVLVPIYNKKIVNELSEKEAWGTLAFTVCIYVLIKFLQGS
GAGTSGFVSNVRSFVWTRVQQHTSLQVQLRLFSHLHALSLRWHLGRQTGDVLRSVDRGTA
SVNNLLLYIVFSIVPTIADIVIAIIYFVSXFNAWFGLIVLICMILYLTLTIIITEWRTKY
RREMNTQDNIAKSKAVDSLLNFETVKYYNSEKYEVKCFEEAILKYQACEWKSSASLALLN
EVQNLIIGAGLLAGSLLCAHFVTVDTFKVGDYVLFSTYIIQLYTPLNWFGTYYRMIQSAF
VDMEKMFELLLEDREVKDEVNAGDLQFQEGKVEFQNVCFSYVEGKEILNDVSFTALPGQT
VALVGVSGAGKSTLLRLLFRFYDVQSGCIRLDGQDISKVKQSSLRSYIGVVPQDTVLFNA
SLRDNIRYGRVAASDQEVEEAAESADIHQHILTFPDGYETQVGERGLKLSGGEKQRVAIA
RTILKNPRIILLDEATSALDTQTERNIQASLAKVCAGRTTIVVAHRLSTIIAADQILVLK
DGHIAELGRHEELLAAGGLYAAMWQKQQQQSEDMEEAKQRTHSHTLTFTSR
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaaacgctccgctaagggaagtgctattccagaagcgtttgccttaacagtt
gagtccaaggccggtgatgagcggagggagggcgcggttaaaccgggctccagttccacc
tgggaggggttcaggcgtaaggtgtgtctgctggttccgttcctgtggcccaagagcagc
accagactccaggctctggttctcctctgtctcagcctactgggtctagaacggttcctc
aatgttctagtacccatttataacaagaagatagttaatgagctgtcggagaaggaggct
tggggaactctggccttcaccgtctgcatctatgtcctcatcaagtttctgcagggcagt
ggagcaggtacgtcgggctttgtgagtaacgtgcgctcgttcgtgtggactcgggtgcag
cagcacacgtctctgcaggtgcagctccgtctcttctcccacctgcacgcactctctctg
cggtggcacctgggccgccagaccggggacgtgctccgcagcgtggaccgagggaccgcc
tccgtcaacaacctgctgctatacattgtgttcagcatcgtacccactattgcagacata
gtcatcgccatcatctacttcgtctccnntttcaacgcctggttcggccttatcgtcctc
atctgcatgatcctttacctcactctcaccattatcatcactgagtggcggaccaagtac
cgccgtgagatgaacactcaggacaacatcgccaagtccaaggctgtggactcactgctc
aactttgagacggtgaagtactacaactcagagaaatatgaagtgaaatgttttgaagag
gccatcctgaagtaccaggcgtgtgagtggaagagtagtgcgtccctggcgctgctgaat
gaggtgcagaatctcatcatcggggccggcctgctggcgggatcactgctctgcgcccat
tttgttaccgtggatacctttaaagtgggggactacgtcctgttcagcacctacataatc
cagctctacacccctctcaactggtttggcacatactacagaatgatccagagtgctttt
gttgacatggagaaaatgtttgagctgctccttgaggaccgagaggtgaaggatgaggtc
aatgctggggatttgcagttccaagaggggaaggtggagttccagaatgtttgcttcagc
tatgttgaagggaaggagattctgaatgacgtctcgttcaccgcgctgcctggacagact
gtggcactggtgggtgtgtctggagcaggcaaaagcacgctacttaggctgctgttccgc
ttctacgatgtgcagtcaggatgtatccgactcgatggccaggacatcagtaaggtgaag
cagagctcactgcgctcctacatcggcgtggtgccccaggacacggtgctgttcaacgcc
agcctgcgggacaacatccgctatggacgcgttgccgctagcgaccaagaggtggaggag
gccgcagagtccgcagatattcaccagcacattctcaccttcccagacggttatgagact
caggtgggagagcgaggcctgaagttgagcggtggtgaaaagcagagggtagccatcgcc
cgcaccatcctcaagaaccctcgcatcatcctgctcgacgaggccacctctgctctggac
acgcagactgaaaggaacatccaggcgtccctggccaaagtgtgtgcaggacgcaccacc
atcgtggtggcacacagattgtccaccatcattgctgctgatcagatcctggtgctaaag
gatggccatatagcagagctgggaagacatgaagagctgttagcagcagggggtctttat
gcagctatgtggcagaaacagcagcagcagtctgaagatatggaagaggccaagcagagg
acacactcacacacactcacattcacaagcagatga
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