Alosa sapidissima (American shad): 121687967
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Entry
121687967 CDS
T11137
Symbol
pigm
Name
(RefSeq) GPI mannosyltransferase 1 isoform X1
KO
K05284
GPI mannosyltransferase 1 subunit M [EC:2.4.1.-]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
asad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
121687967 (pigm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
asad01003
]
121687967 (pigm)
Glycosyltransferases [BR:
asad01003
]
GPI-anchor biosynthesis
Core oligosaccharide
121687967 (pigm)
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Gene cluster
GFIT
Motif
Pfam:
Mannosyl_trans
PIG-U
GT87
DUF3619
Motif
Other DBs
NCBI-GeneID:
121687967
NCBI-ProteinID:
XP_041923151
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Position
17:29988503..30001741
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AA seq
417 aa
AA seq
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MAFSGQKALSQLMRMHTLLSFALVMRLLLVGFGIYQDRTMIVKYTDIDYHVFTDASRYLT
QGESPYNRSTYRYTPLLAWMLTPNIYLTFVFGKLLFVACDVLTGVLIQRLLLLRGLSTEA
AGLHSALWLLNPLPAGVSTRGNAESLLSALVLGTLLCLERRRTLAAALLYGLAVHMKIYP
VTYALPIALSLQAREPGGGPSGGKRSGTLWPFVRRLLNRDLLMFAFVSGGLFCGLTLVFY
RMYGWEFLHETYLYHLTRRDIRHNFSPYFYLLYLTAESAWSPALGVAAFLPQAALLLLTS
LAFHADLVLCCFLNTAIFVTFNKVCTSQYFLWYLCLLPLVIPHLTLSLKKGVGMLALWFA
GQAIWLAPAYYLEFEGCDAFLLIWLAGLLFLSINTYIMVTIISHYRPLSIKKRPKTD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcgttttcagggcaaaaagccctctctcaactgatgagaatgcacacgttgctgagt
tttgcacttgtgatgcggctactgctggtcgggtttgggatttatcaggacagaacaatg
atcgtgaaatacacagatatcgattaccatgtgtttacagatgcgtcaagatacctcact
cagggtgagtctccgtacaacaggtccacttatcgctacactccccttctagcctggatg
ctgacccccaacatctacctgacgttcgtcttcgggaagctgctgttcgtggcgtgcgac
gtgctaacgggcgtgctcatccagcggctgctcctgctgcgcggcctctcgacggaggcg
gccggcctccacagtgccctctggctgctgaacccgctccccgcgggcgtgtccacgcgc
gggaacgccgagtccctgctgtcggcgctggtgctggggacgttgttgtgtctggagcgg
agacggacgctggccgccgccctgctctacggactggccgtgcacatgaagatctacccg
gtgacgtacgcgctgcccatcgccctgtccctgcaggcgagggagccgggagggggcccg
tccggcgggaagaggagcgggacgctctggccgtttgtccgcaggctgttgaacagagac
ctcctgatgttcgccttcgtctctggagggcttttctgtggactcactctagtgttctat
cgcatgtacggctgggaattcctccacgagacctacctgtaccacctgacccggcgcgac
atccggcacaacttctcgccgtacttctacctgctgtacctgacggcggagagcgcatgg
agcccggcgctgggcgtagctgccttcctgccccaggccgcgctgctgctcctgacctcg
ctggccttccacgctgacctggtcctctgctgcttcctcaacaccgccatcttcgtcacc
ttcaacaaagtctgcacctcgcagtacttcctgtggtacctgtgtctgttgccgctggtt
attccccacctcactttgtctctcaagaaaggagttgggatgctggcgctctggtttgct
ggacaggccatttggctggctccagcgtactacctggagtttgagggatgcgacgcgttc
ctcctcatctggctcgctggactgctcttcctcagtatcaacacttacatcatggtcaca
atcatctcccattacaggccactgtctatcaagaagaggcccaaaacggactga
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