Alosa sapidissima (American shad): 121688023
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Entry
121688023 CDS
T11137
Symbol
rreb1a
Name
(RefSeq) ras-responsive element-binding protein 1 isoform X1
KO
K20210
ras-responsive element-binding protein 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121688023 (rreb1a)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121688023 (rreb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-H2C2_5
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2H2_2
zf-C2H2_8
zf-C2H2_11
zf-C2H2_REST
Motif
Other DBs
NCBI-GeneID:
121688023
NCBI-ProteinID:
XP_041923252
LinkDB
All DBs
Position
17:complement(18787397..18825570)
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AA seq
1804 aa
AA seq
DB search
MSRRKQPNPNKVRLMENGPEDKLLGEEAALTMTTREEEPEEKCNDLHTEDLVEHRGRRDT
AMSTENGAAGADDMLEETYGVDLSSINSMMSTVMSVSTLNGSGVDSASCTPTKSPVHSKS
INSRSPTISRAARKNPEAKEEGTSFICPLCDKDCLTQHQLTTHIRQHNQDNGATDHSCSI
CGKSLSSASSLDRHMLVHSGERPYKCSVCGQTFTTNGNMHRHMKIHVKEPAGSIPSSPPS
PTKRRRASAKRKGSQDEDGEQTEEANNKMVSEERDTENAPQGKGEDDKLPCSICFKAFRC
KSDLETHMETHPDSSLRCDLCCLSFRTHRGVLRHNAATHHQLPTDPSGQPFIQNNPSIPL
GFNDMAFIDFSCHKFPQIAQVWCETNLRRCTSKIHRFVCDVCDKAFPLQSALDLHKDTHQ
QKDGSPDPPPSLGAEKAETPSPDQFSFMGGLGLQHISKVKPTPSEEEVYQAKLDSIRVIH
VEQPTHSLPQEGGVVTGLSGMGFHLVDPLSLQSLSQREALSILSLKPFQGGFVLQPDGGA
VAKPVCGEGGLELADIQQILKVASAAPNQIALPTLSKAPCSATQAAGHKQMPPLKPKPLV
TPWTNMSTSTPPSLITTQQASLGCISPNLPPPNSQLLRNSREMSSALSSSSVVSGCQVSS
ERMQMEADCMGDAEMPQESDQLKSEAGQGAEGGEKKASGSGAQKASYPCRFCNQVFAFSG
LLQAHMRYHLGIQPRQCNICDYVAPDKATLIRHLRTHTGERPYVCRVCHYPFTVKANCER
HLRKKHMKNTRKEIEKNIKYVTSTTTASSPVSTQEAILEQVGAGETLCRFCGEDLKTYRA
LQIHLRTHSGCQRKPYECRRCGAAFLTKRNCIHHLLKGHPEIQEQIEEHIAVMPAGTALQ
PRLNSQPVNGLPASSTSPNVKMEDLSFYSGELEQPLDFSNKHVGGSSAGLPQIKVEGSIS
SLLSDDCDMEPIDLSIPKNPEKRMKMEMTVSALEHREIKKETSFITPLDHSVNQTVQREK
DEKLLQQGGYQMPLAVASALSAGGPAGRALRLKPLLPKPVSSSTSSSTLKELPPLASIAQ
IISSVSGAPDLLKRDSLMENNGGPNMQRERDSTGKVDSASQDGLLDELPLERAAKRGRKR
PVKCMKGTNINKGNTGSGIDLESSGEFASIEKMLATTNTNKFSPYLQSEDLEIGQKEGEV
SLEKSEKNEEKEQLHPQKGPSEKLHPQVRKHNPAPGQLQQPPKGKKNAYSNSVQKMTCPF
CPRVFPWASSLQRHMLTHTGQKPYPCPKCDAFFSTKSNCERHLLRKHGVTNRVLRRNGVM
PKVKETEEGSPESAESMSETELPTAEAMDESGTDHCSQSTIPGTQKPSPPTDVSNDATTP
STDKDCTKQEETEILTDLAQDSTNLPTTHDNDDDAHSSKSLDFNFASKLMDFKLSEHGPQ
SQTYSPDGGSGKNVAVQLEDSAPPPEDTKHTCKTCGKSFRYAATLARHEKAHICESITES
QCKEDKNSCTKIKREEEEEEEEEEEMDTEGEKKRAAESSVESGSEEDEEVDQSDEEGGSE
PKDNEGDAGGGLEIKADKRKKVCNVCSKRFWSLQDLTRHMRSHTGERPYRCTTCERTFTL
KHSLVRHQRIHQKPQSEVTNGGGSESLGGSASEGESSQPGTNPHSENEQEREATEKVSEA
HSGQSSPQLTDRPSIEGLAQVITAEDPREAPEVEDPSETSRTEAEPGSGVGVDPEPDTVS
QMPEEAARKVGVLPSKISPPQPEPEDSVDTPSNGFIQGLLEIHTAKPSLEHMQPSAEHPS
VGVD
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcgtaagcagcccaaccccaacaaagtcagactgatggagaatggtccagag
gacaagttgctaggggaggaagctgctctcacaatgaccaccagagaggaggaaccagaa
gaaaagtgcaatgacctccacacagaagacctagttgaacacagagggagaagagataca
gcaatgagcactgagaatggggcagcgggtgctgatgacatgctggaggagacatatggg
gtggacctctcctccattaactcaatgatgtccactgtgatgagtgtgtccacgctgaac
gggtcgggggtggattcagcctcatgcacccccacaaagagtcctgtccacagcaagtcc
attaacagcagatctcctaccatcagccgcgcagcaaggaagaatccggaagccaaagag
gaggggacatctttcatctgccctctatgtgacaaggactgcttaacccagcatcagctc
actacacacatccgccagcacaatcaggacaatggtgcaactgaccactcatgcagtatc
tgcggcaagtccctgagctctgccagctcattggaccgtcacatgctggttcacagtggt
gagcggccctacaagtgctctgtatgtggacaaactttcaccaccaacggcaatatgcac
agacatatgaagatccatgtcaaggagccagccggctccattcccagtagtccaccctct
cccacaaagcgcagacgggcctcagccaagaggaagggtagccaggatgaggatggagag
caaacagaggaagccaacaacaagatggtatctgaggaaagggatactgaaaatgcacct
cagggcaaaggtgaagatgacaagctgccctgctctatttgcttcaaagcattcagatgt
aagagcgatctagagacccacatggaaacacaccctgactctagcctaagatgtgatctc
tgctgtctctcattccgcactcaccgaggtgttctacgtcacaatgccgccactcaccac
caacttcccacagatcccagcggccagccttttatccagaacaacccatccattcccctc
ggtttcaatgacatggccttcattgacttttcttgccacaagttccctcagatcgcacag
gtttggtgtgaaaccaatttgcgtcggtgcaccagcaaaatccatcgctttgtgtgtgat
gtgtgtgacaaggctttccctctccaatctgctcttgacctgcataaagacactcaccaa
caaaaagatggctcacctgaccctcccccctctcttggagctgaaaaagccgagacccca
tcacctgatcagttctcttttatgggtggtctgggtctgcagcacatttccaaggtcaag
cctaccccttctgaggaagaagtttaccaggcgaagttggacagcatacgcgtcatccat
gtggagcagcccacgcactccttgccacaagagggcggtgtcgtgacagggctgagtggg
atgggttttcacctcgtggacccattgtcactccagagtctctcgcaacgcgaggctcta
agcatcctctccctcaagccgttccagggagggtttgttcttcagccagacgggggtgct
gtggccaagcctgtctgtggagaaggtggtctagagctggctgacatccaacagatcctg
aaggtggcatctgcagcacctaaccagattgcactgcccaccttgtccaaggcaccatgt
agcgctacgcaggcagctggccacaagcagatgccgccactcaagcccaagccactggtg
actccgtggaccaatatgagtacttctacccctccctcactgatcactacacaacaggct
tcgctaggctgcatcagtcccaatctgcctcccccaaatagccagctactccgtaactct
agggaaatgtcctcagctttgtcttcctcctccgttgtctctggttgtcaggtgtcttca
gagagaatgcagatggaggcggactgcatgggcgatgctgaaatgccacaggaatcagat
caacttaagagtgaggcaggccagggtgcggagggtggtgaaaagaaggcctcaggctca
ggggcccagaaggcatcctatccttgcaggttctgtaaccaggtctttgccttctctggt
ttgctgcaggcccacatgcgctaccacttgggcatccagccccgccagtgcaacatttgt
gactatgtggcacctgacaaagccacactgattcgccacctgcgcacacacactggtgag
cggccctatgtttgtcgtgtctgccactatcccttcactgtcaaggccaactgtgagcgc
catttgcgcaagaagcatatgaagaacacacggaaagagattgagaagaatatcaagtat
gtcacctccaccactacagcctcctcaccggtctctacccaagaggccatcctggagcag
gtgggggccggcgagaccctttgtcgcttctgcggggaggatctgaaaacctaccgagcc
ctgcagatccacctccgtacccacagtggttgccagcgcaagccttatgagtgccgccgc
tgtggggcggctttcctgaccaagagaaactgcatccaccacctactgaaagggcaccct
gagatccaggagcagattgaggagcatatagctgtaatgccagctggaactgccttgcaa
ccaagacttaactcccagcctgtcaatggcctgcctgcctcctccacatcacctaatgtg
aagatggaagatctgagcttctacagtggggagctcgaacagcccctggacttttcaaac
aaacatgttggaggaagcagtgctggattgccacagattaaagtagagggtagcatctcc
tctctattaagcgatgactgtgacatggagcctattgacctttccataccaaagaaccca
gagaagcgaatgaagatggagatgactgtttcagcactggaacatagagaaatcaagaag
gagacctcattcatcaccccccttgaccacagtgtgaaccagaccgtacagagagagaag
gatgagaagttgttgcagcaagggggctaccagatgcctttggctgttgcctcagccctc
agtgcaggggggcctgctggtcgggccctacgactaaaacctctcctacccaaaccagtc
tcctcatccacttcctcctccaccctgaaagagttgccaccgctagcctccatagcccag
atcatctcctctgtctcaggagctccagatcttctgaagcgagactctctcatggagaac
aatggcggccctaacatgcaaagagagagagactctactggcaaagtagactcagcctcc
caggatggcttgttagatgagcttcccttggagagagcagctaagaggggcaggaaaaga
cctgtgaaatgcatgaagggtacaaacataaacaaaggaaacacaggcagtggtattgat
cttgagtccagtggtgagtttgccagtattgaaaagatgctagccacaaccaacaccaac
aagtttagtccctacctgcagtcagaagatttagaaattggtcagaaggagggagaagtt
tcacttgagaaaagtgagaagaacgaagagaaagagcagctgcaccctcagaaaggaccc
tcagaaaagctgcaccctcaggtgcgcaagcacaacccagctccaggccagctgcagcaa
ccaccaaaggggaagaagaatgcctactcaaactcagtgcagaagatgacctgtcctttt
tgtccaagagttttcccctgggccagctccctgcagaggcatatgcttacacatacaggt
caaaagccatatccatgtcccaaatgcgacgcttttttttccacaaagtctaactgtgag
cgtcacctgttgcgtaaacatggtgtgaccaatagagtgctgcgtcgcaatggtgtcatg
ccaaaggtcaaagaaaccgaagagggttcacctgagagtgcagagagtatgtctgaaaca
gagctccccacagcagaagctatggatgagagtggtactgaccactgttcccagtccacc
atccctggaactcagaagccttcccctccgacagacgtttctaatgatgctaccaccccc
agtactgacaaagactgcacaaagcaggaggagactgagatcctgacagaccttgcacag
gatagcacaaacctccctaccacccatgacaacgacgatgatgcccacagcagcaagagc
ctagacttcaattttgccagcaaactgatggacttcaagctgtcggagcatggaccgcag
tcccaaacatactccccggatggaggcagtgggaagaatgtagcagtacagctagaggat
tcagcaccacccccagaggacaccaagcacacctgcaagacctgtgggaaaagtttccgc
tacgctgctacactggcccgacacgagaaggctcacatctgtgagagcattactgagagc
cagtgcaaggaagataagaacagttgcacaaaaataaaaagggaggaggaagaggaggag
gaggaggaggaagaaatggacactgagggggagaagaaaagagcagcagagagcagcgtg
gagagtggctcagaggaagacgaggaggtggaccagagtgatgaggaaggaggctcagaa
ccaaaggacaatgagggtgatgctggagggggactggagatcaaggcagacaagaggaag
aaggtctgcaatgtgtgcagcaagcgcttctggagtctacaggacctaaccagacacatg
cgttctcatacaggagaacggccttaccggtgcactacttgcgagcgcaccttcaccctg
aagcacagtctggttcgccaccagcgcatccaccaaaaacctcagagcgaggtgaccaat
ggtggggggtcggaatcgttagggggctccgctagtgaaggagagagctctcaacctggc
accaaccctcattctgagaatgagcaggagagagaggcgacggagaaagtgagtgaggcg
cacagtggtcagtcgagcccacagctcacagacaggccaagtattgaaggcctcgcacaa
gtcattactgcagaggaccctcgagaagcccccgaagtggaggacccatcagagacctcg
agaactgaggctgagcccggatcaggggttggagttgatcctgagccagatacagtttct
caaatgcctgaggaagcagcgcgaaaagtaggtgttctcccctccaagatctccccccct
cagccagagccagaggattcagtggatacccccagtaatggtttcatccagggactactt
gagatccacactgctaagccttcccttgagcacatgcagccatctgctgagcatccttct
gtgggggtggattaa
DBGET
integrated database retrieval system
