Alosa sapidissima (American shad): 121688141
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Entry
121688141 CDS
T11137
Symbol
nfx1
Name
(RefSeq) transcriptional repressor NF-X1
KO
K12236
transcriptional repressor NF-X1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121688141 (nfx1)
04121 Ubiquitin system [BR:
asad04121
]
121688141 (nfx1)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
121688141 (nfx1)
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
121688141 (nfx1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
121688141
NCBI-ProteinID:
XP_041923466
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Position
17:complement(12567908..12584390)
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AA seq
1140 aa
AA seq
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MAEGSVTDTLELNPDTPEFIPRAAQIQHRSKRGRPRSDAVRNRSDHHTGQHFQQAFSFNA
NHEGGKPPVQENWTRPSDSYHSPQGDDGRRGRGRPGRGRGGGGGRGNGYGNVGESEGNHT
GRGRARGQNPRWHKPGNGRGHFNRNQGDIPAFMPEMPPNVQSGIEEPRWQKPSVVPNNTG
MRSEELRDTRPKKPRKFNQEPRRGRAEKGARGPLPRERNENQENCDSGRSWSPAEPLEPR
PNSDEDSESRNHKSWRAPNRNPPGETRRKPADLRHSRDNWREHQPADRETRREDKGPRVA
SPPRSPLPNPEEPSWRAGTGRAQGRRTPLQDRGQRHTGGPNPRAGHRRHMDHVPKSKETQ
TGCLIEQLTEEKYECMVCCEVIRVMAPVWSCQNCFHVFHLNCIKKWARSPASQGDDGSEG
WRCPACQHVAFRAPNSYTCFCGKVTNPEWQRSEIPHSCGDMCGKKRSGANCNHPCNILCH
PGPCPQCPAVVSKSCTCGKTSQLVRCSQTVAIRCEEVCSAALNCTEHTCAQVCHSGPCQP
CQLRVQQVCYCGVVLREVPCGTDKEHFDGSGHFSCQKPCGKMLDCQRHRCQQTCHTGPCQ
SCPLSPRLVRTCPCGQTALSKLLELGYAERRCCEDPIPSCGKTCGKPLPCGSTDIIHMCE
KLCHEGACGPCSLTSSIKCRCGSKAKEVPCSSIQTEDDMSFACDKKCNKKRSCGRHKCGE
LCCVDIEHKCSLICGYKLNCGLHRCQEPCHRGNCQPCWQTSFDELTCHCGETVLYPPIPC
GTKPPECKNPCARRHDCDHPVFHNCHSEEKCPPCTYLMKKWCMGMHEQRSNIPCHLQEIS
CGLPCNKLLPCGSHHCKRICHRGECHAEGEACRQPCVIPRPECQHPCTAPCHHGKPCPRN
TCTTKVTVQCDCGRKKETVSCTEAASSYQRYAAIAMASKLSDMQLGESVDIGQLIPKKES
KQARLECDEECATQERNKRLAEALQIDQSVDPFNTRSTSKYSDSLKDDARKEFKFVSEVE
REIKNLVELASKGKQPKRSHCFPPMSREHRRIVHELAEVYAVESVSYDSEPKRNVVITAI
RGKSACPNSTLTALIERETSGRAPPPIAHIKQHGSKNETSISWLKPTKEEPAIDYFDVQD
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaggttctgttactgacactctggaacttaatccagacacaccggagtttatt
ccacgtgcggcacagatccagcatcggtccaagagaggtcggccacgttcagacgccgtg
cggaatcgtagcgatcatcatacaggccagcactttcaacaagccttctcctttaacgct
aatcatgaaggtggaaagcctcctgtacaagaaaactggacaagaccttctgatagctat
cactctccccaaggagatgacggcaggagagggagaggaagaccaggtagaggcagaggt
ggaggaggaggcagaggaaacggttatggaaatgtaggtgagagtgaaggcaaccacact
ggtcgaggacgtgcaaggggccaaaatccaagatggcacaagccagggaatggtagagga
cactttaatcggaatcagggtgacatcccagcctttatgccagaaatgcctcctaatgtt
cagtctggcatagaagaaccacgctggcagaagccttcagtggtccctaacaacacaggg
atgagaagcgaggagctccgcgacacgcgtccaaaaaagcctcggaagttcaaccaagaa
cccaggagaggtcgtgcagagaaaggtgcgagaggaccccttccaagagaacggaacgag
aaccaggagaactgtgactctggaaggagctggtccccggcagagcctctagaaccaaga
cccaactcggacgaagattccgagtctcggaaccacaagagctggagagcccccaacagg
aatcccccaggtgagaccaggaggaagcctgcagaccttcgccactctagggacaactgg
agggagcatcagccagcagacagggagacgcggagagaagacaaaggcccgagagtggcc
tcaccccctaggagccccctccctaatccagaggagcccagctggagggctggaacaggg
agagctcagggcaggcgaacaccactgcaggacaggggccagaggcacacagggggaccg
aaccctagagctggtcacaggaggcatatggatcatgtgcccaagagcaaagagactcag
acaggctgtctgatcgagcagctgactgaggagaagtatgagtgcatggtgtgctgcgag
gtgatccgcgtcatggcccctgtctggagctgccagaactgcttccatgtcttccacctc
aactgcattaagaagtgggctcgctcgcctgcctcgcagggtgacgatggaagtgaggga
tggaggtgtcccgcatgccagcacgtggccttccgagctccgaactcctacacatgcttc
tgtggcaaagtgaccaacccggaatggcagcgcagtgagatcccgcacagctgtggtgat
atgtgtggaaagaagaggagtggagcaaactgcaatcatccctgcaacatcctctgccat
ccaggaccctgtccacaatgcccagctgtcgtgtccaagtcatgcacatgtgggaaaacc
agccagctggtacgttgtagccagacggtggccattcgctgcgaggaggtgtgcagtgct
gcgctgaactgcactgagcacacctgtgcccaggtgtgtcacagcgggccctgtcaaccc
tgccagctccgggtccagcaagtgtgctactgtggtgtggtgttgagagaggttccctgc
gggaccgataaggaacactttgacggttctggacacttctcttgtcagaagccctgtgga
aagatgttggactgccagaggcaccggtgccagcagacgtgccacactgggccgtgccag
tcatgcccgctctcgccccgcctggtgcgcacctgcccctgcggccagacggcgctcagc
aagctgctggagctgggctacgcagagaggcgctgctgtgaggacccaataccttcctgt
ggcaagacctgtgggaaacctctgccctgcggctccaccgacatcattcacatgtgtgag
aagctgtgccacgagggcgcatgtgggccttgctccctcacttccagcatcaaatgccgc
tgcggctccaaggccaaggaggtcccctgctcaagtatccaaacagaagatgatatgagt
tttgcctgtgataaaaagtgcaacaagaagcgctcctgtggcagacacaagtgtggggaa
ttgtgctgtgtggacatagaacataagtgttctctgatctgcggctataaactcaactgt
ggtctgcatcgctgccaggagccctgtcaccgtggcaactgccaaccctgctggcaaact
agtttcgatgagctgacgtgccattgtggagagactgtcctgtacccgcctatcccctgt
ggcaccaaaccacccgagtgcaagaacccctgtgcccggcggcatgactgtgaccaccca
gttttccacaactgccacagtgaggagaagtgcccgccctgcacctacctcatgaagaag
tggtgtatgggcatgcatgagcaaaggagcaacatcccgtgccacctgcaggaaatctcc
tgtggccttccctgcaacaagctgctgccctgcggctcccaccactgcaaacgcatttgc
caccgcggcgagtgtcatgccgagggcgaggcgtgccgccagccctgcgtcatcccccgg
cctgagtgccagcacccctgcaccgcgccctgtcaccatggcaagccctgcccgcgcaac
acctgcaccaccaaggtaacagtgcagtgtgactgcgggcgaaagaaggagacagtctca
tgcacagaggcagccagctcttaccagaggtatgctgctattgcaatggcaagcaagttg
tcagacatgcagctgggagaatcagtggatattgggcagcttatccccaagaaagagtcc
aaacaggccaggttggaatgcgatgaggagtgtgccacgcaggaaaggaacaagcgattg
gctgaagccctgcagatcgaccagtcggttgatccttttaacactagatccacttccaag
tacagcgattctctcaaggacgacgccagaaaagaattcaagttcgtcagtgaagttgaa
cgagaaatcaaaaacctagttgaactggcaagcaagggcaagcagcccaagcggagccac
tgtttcccgcccatgagtagggaacaccggcgcattgttcacgagctggccgaggtgtat
gccgtagagagtgtcagctacgacagtgaacccaaacgcaacgtggtcatcactgccatc
agggggaagtctgcctgcccgaactccaccctgaccgcgttgatcgagagggagaccagc
ggcagggcccctccccccatcgcccacatcaagcagcacggcagcaagaatgagactagc
attagctggctcaaaccaacaaaagaagagcctgccatcgattactttgatgtccaggac
tga
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