Alosa sapidissima (American shad): 121688170
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Entry
121688170 CDS
T11137
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
asad01001
]
121688170 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asad03041
]
121688170 (prpf4bb)
Enzymes [BR:
asad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121688170 (prpf4bb)
Protein kinases [BR:
asad01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
121688170 (prpf4bb)
Spliceosome [BR:
asad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121688170 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pox_ser-thr_kin
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
121688170
NCBI-ProteinID:
XP_041923532
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All DBs
Position
17:complement(18074438..18086103)
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AA seq
1063 aa
AA seq
DB search
MRSLRLTTSTCETIEEQRKGHWLKKMADVEMDFQGERLNNGKEDLESPGKSEDENGDMSE
EEEEEDEGEAPAVTAGVEINGEKSEQGSKHHSSSGKHKKKKHKHRSKHKKHKHATDEDKE
KKRKHRHKHKKHRRKDDVSPSPAAGATEKAEGSPSTVNPNLDDRALLEDLEKQRALIKAE
LDSQLMEGKVQSGMGLILQGYNSGSEEDGGGRDGRTRNGEQRQRVSTGKARSPKDQSSRS
GKSRRDSIEAGKPGSKRRSRSRSKEKSSRDAKVEKTTTSATTVTKGSDSNKERGKDRSGS
KDRKRSRSQDRSKDRPKKSPSPAGHRRSPSDKRAEGKGRSERRSSPRPDERRHQAEPSSS
SRRSSSRGRRSRSRDGRPGRSEAERDREKDKRPGKSPSKDTSSGKENRSPHHRRAPSPQH
HRSSSPRHRDRSAHQPPSGSADRGKQSHSPPRTRSPPRRGRSRSPEARRRDSSPVRKRSR
ADGITGRSRDTSPVRRRMSRSPLRRRSLSPRRQARSSPRRRSRSPLRRGERDRFGRLRYR
RSNSRDRGRRRRRSRDEDKFKGSLSEGMKVDQESSSEEVLEDFDAEEEDEEALIEQRRQQ
RLAIVQKYKGGNEDSNMGSMASEPSSPQSSTRSRSPSPDDILERVAADVKEYERENLNTF
EANIKAKQNLIAQEKDGSNPKKPSAPDMFTESDDMFAADFDSARLRAAGIGKDFKENPNL
RDNWTDAEGYYRVNIGEMLDKRYDVYGYTGQGVFSNVIRARDTARAGQDVAIKIIRNNEL
MHKTGMKELEFLKKLNDADPDDKFHCLRLFRHFDHKQHLCLVFEPLSMNLREVLKKYGKD
VGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKLCDFGSASHVADN
DITPYLVSRFYRAPEIIIGKPYDYGIDMWSVGCTLYELYAGKILFPGSSNNHMIKLAMDV
KGKMPNKMIRKGLFKDQHFDQNLNFLYIEVDKVTEREKVTVMSTINPTKDLLADMIGGQR
LPEEMRKKVMQLKDLLDGTLMLDPAKRITINQALQHPFIQEKI
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgagatctttaaggctcactacatctacatgcgaaaccatagaagaacaaaggaaaggc
cactggttgaagaaaatggccgacgtagagatggattttcaaggcgagaggttgaataat
gggaaagaggatttggaaagtcctggaaagagtgaggatgagaacggtgacatgtcggaa
gaagaagaggaggaggatgaaggggaggcaccagcagtaacagctggggttgagataaac
ggagagaaatcagaacaggggtccaagcatcacagcagcagtggtaaacataagaagaaa
aaacacaagcaccgcagcaagcacaagaagcataagcatgctacagatgaagacaaggag
aagaagcgcaaacacaggcacaagcacaagaaacatcgacgcaaagatgatgtctcgcca
tcccctgctgctggggctactgaaaaggctgaaggctccccaagcacagtcaaccccaac
ttagatgaccgagcccttctggaggacttggagaagcagcgggcacttatcaaagctgag
ttggacagccagctgatggagggcaaagtgcagtcaggcatgggccttatcctgcagggt
tacaactctggctcagaggaggacggtgggggaagagatggcaggactcgtaatggggag
cagagacaaagggtcagcacaggaaaagctcgctcgcccaaggaccagagcagccggtcc
ggcaagagccggagggactcgatcgaagctggcaaaccaggctccaaacgccgcagccga
agcagatccaaagaaaagagtagtcgggatgccaaagttgaaaagaccacgacatcagca
accacagtgactaagggcagtgactctaataaagaacgtggtaaggatcgcagcggttct
aaagacaggaagcgctcacgaagccaggaccgttccaaggatcgtcccaagaagtctcca
tccccagctggacacagacgttcaccctctgacaaacgagcagaggggaaaggccgctcg
gagaggcgatcgtctccccggccagatgagaggcgacaccaggctgagccaagcagcagc
agtcgcaggtcgagctcacgcggccgtagaagtcggtccagagatgggcggccaggtcgc
tcagaagcagagagggatcgagagaaggacaaaaggcctggtaaatccccgtccaaagac
acgtcatctgggaaggagaaccggtcgccgcaccacaggcgagctccgagcccccagcac
catcgcagctcctctccacgccacagggatcgttctgcacaccagccaccatctgggtct
gcagacaggggcaagcagagccactccccccccagaaccaggtccccgcccagaaggggt
agaagcaggtctccagaggcacgcaggagggactcctcacctgtcagaaaacggagccgg
gcagatggtatcacaggtagatcgcgtgacaccagtcctgttcgacgacgaatgagccgc
tcccccttgaggcggaggtctctgtctccacggcgacaggcgcgctcatctccccgcagg
cgaagcaggtcccccctgaggcgtggtgagcgagaccgttttggtcggttacgataccgg
cggtccaactctcgggatcgagggcgaaggagacggaggagcagagatgaggacaagttc
aagggcagcctttcagagggcatgaaggttgaccaggaatcatcctcagaggaagtgttg
gaggattttgatgcagaggaagaggatgaggaagctttgattgagcagagacgacaacag
cgattagccattgtgcagaaatacaagggagggaatgaggacagcaacatgggctccatg
gcgtcagagcccagcagtcctcagagtagcacacggagtcggtcaccgtcgcccgacgat
atcctggagcgtgttgcagctgatgtgaaggaatatgaacgtgagaatctcaacacattc
gaggccaacatcaaagccaagcagaacctcattgcgcaggagaaagatggctccaaccca
aagaagccatcagctcctgacatgtttacagagtcagatgacatgtttgctgcagacttt
gatagtgcaaggctgagagcagcaggcattggcaaggatttcaaagaaaaccccaacctc
agggacaattggacagatgctgaaggctattaccgtgtgaacattggtgagatgttggat
aagcggtatgatgtgtatggctacactggccagggggtcttcagcaacgtgatccgggcc
agggacacggcccgcgcaggccaggacgtggccatcaagatcatccgcaacaacgaactc
atgcacaagactggaatgaaggaattggaattcctgaagaagctgaatgatgctgatcct
gatgacaagttccactgtctccgtctgttccgccactttgaccacaaacagcatctgtgt
cttgtctttgagccactcagtatgaacctacgtgaggtgctcaaaaagtacggtaaagat
gtggggctgcatatcaaggcggtgcgatcctacagccagcaactctttctagccctgaag
ctcctcaagcgctgcaacattctgcatgccgacatcaaaccagacaacattctggtgaac
gagtcaaagacgattttgaaactctgcgattttgggtcagcgtcccacgttgcagacaat
gatatcacaccctacttggtcagcaggttttacagagcacctgaaatcatcattgggaag
ccatatgattatgggatagacatgtggtcagtgggctgcactctttatgagctctacgct
ggcaagatcctcttcccaggctcttcaaacaaccacatgatcaaactggccatggacgtc
aagggcaagatgcccaataagatgatccggaaaggcctgttcaaagaccaacactttgac
cagaacttgaacttcttgtacattgaagtggataaagtgacagagagggagaaggtgact
gtcatgagcaccatcaaccccacaaaggacctgctggcagacatgattggaggtcagagg
ctccccgaggagatgaggaagaaggtgatgcagctgaaggacctgctagatgggactctc
atgctggaccccgccaagcgcatcaccatcaaccaggccctccagcacccattcatccag
gagaagatctaa
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