Alosa sapidissima (American shad): 121688177
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Entry
121688177 CDS
T11137
Symbol
chmp5b
Name
(RefSeq) charged multivesicular body protein 5
KO
K12198
charged multivesicular body protein 5
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04144
Endocytosis
asad04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121688177 (chmp5b)
09143 Cell growth and death
04217 Necroptosis
121688177 (chmp5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121688177 (chmp5b)
Membrane trafficking [BR:
asad04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
121688177 (chmp5b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
NPV_P10
Prefoldin_2
DUF948
Big_3_3
DUF1319
Alpha-E
HrpB7
FliJ
GrpE
Histone_HNS_N
Motif
Other DBs
NCBI-GeneID:
121688177
NCBI-ProteinID:
XP_041923540
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All DBs
Position
17:16612869..16617982
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AA seq
220 aa
AA seq
DB search
MNRIFGRGKAKGPPPNLTDCIGGVDARAESVDKKIARLDAELAKYKDQMKKMRDGPSKNM
VKQKAMRVLKQKRMYEGQRDQLTQQSFNMEQANYTIQTLKDTKTTVDAMKIAAKDMKKAY
KNVKIDQIDDLQDQLEDMMEDANEVQEALSRSYGTPDIDEDDLEAELDALGDELLFDEDS
SYLDEASTAPSIPEGLPGDKSTNRDGVLVDEFGLPQIPAT
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaatttttggtcgaggaaaagctaaggggccacccccgaacttaacagattgc
ataggaggtgtggatgcacgggctgaatccgttgacaagaaaatagccaggttagatgca
gaactggcgaaatacaaggatcagatgaagaagatgcgagatggaccctcgaagaacatg
gtgaagcagaaagcaatgcgagtcctgaagcagaagagaatgtatgaggggcagagagat
cagttgacgcaacaatccttcaacatggaacaagccaactataccatccagaccctgaag
gacactaaaaccactgtggacgccatgaagatcgcagccaaagacatgaaaaaggcatac
aaaaatgtgaagattgatcagattgacgatctgcaagaccagctggaggacatgatggag
gatgctaatgaagtacaggaggccctgagccgaagctatggcactcccgacatagatgaa
gacgaccttgaggcggaactggatgcacttggtgatgaactgctctttgatgaggactcc
tcttaccttgacgaagcctccactgctccatccataccggagggtctaccaggagacaaa
tctaccaacagggatggtgttctggttgatgaatttggcttacctcagatccctgcaaca
taa
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