Alosa sapidissima (American shad): 121688216
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Entry
121688216 CDS
T11137
Symbol
zic1
Name
(RefSeq) zinc finger protein ZIC 1
KO
K09224
zinc finger protein ZIC 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121688216 (zic1)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
121688216 (zic1)
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Gene cluster
GFIT
Motif
Pfam:
zf_ZIC
zf-C2H2
zf-C2H2_15
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_8
zf-met
Zap1_zf1
zf-C2H2_16
Motif
Other DBs
NCBI-GeneID:
121688216
NCBI-ProteinID:
XP_041923600
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Position
17:complement(29468675..29471800)
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AA seq
442 aa
AA seq
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MLLDAGPQYPTIGVTTFGSSRHHSTGEVTDREVALGINPFADGMGAFKINHSSHDLGSGQ
TAFSSQAPGYAAAALGHHHHPTHVSSYSTAAFNSTRDFLFRNRGFGDATSAQHSLFASAA
GSFAGPHGHSDAAGHLLFSGLHEQAASHASSNVVNSQMRLGFSGDMYGRADQYGHVTSPR
SEHYASTQLHGYGPMNMNMAAHHGAGAFFRYMRQPIKQELICKWVEPEQLTNPKKSCNKT
FSTMHELVTHLTVEHVGGPEQSNHICFWEECAREGKPFKAKYKLVNHIRVHTGEKPFPCP
FPGCGKVFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYLCK
MCDKSYTHPSSLRKHMKVHESSTQGSQPSPAASSGYESSTPPTIVSPSTENQSSSSISPA
SSTVHHTTSHSTLSSNFNEWYV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgctcttggacgcaggaccgcagtatcctaccattggggtgactactttcggctcctcc
aggcatcactcaacaggcgaagtaacggacagagaggtagctttggggatcaatcccttc
gccgatggaatgggtgctttcaaaatcaaccacagctcgcatgatctcggctcggggcaa
acggcgttttcttcacaggcgcccggctacgcagcagctgctcttggacaccatcaccat
cccactcatgtcagctcctactccaccgccgctttcaactccacccgggactttctgttt
cggaatcggggcttcggagatgccactagtgcgcagcacagtctcttcgcttccgctgcg
ggaagtttcgctgggccacacggacattctgatgctgccggacacctgctcttctcggga
cttcacgagcaagcggcttcccacgcatcttcaaacgtagtgaacagtcaaatgcgccta
ggcttttcaggggacatgtatgggagagccgaccaatatggccatgtaacaagcccgagg
tctgagcactatgcctcgacccaactgcatgggtatggcccgatgaacatgaacatggct
gcccatcacggcgctggggccttcttccgttatatgaggcaacccatcaaacaagaactt
atctgcaagtgggtcgagccggagcagctgacgaatccgaaaaagtcatgtaacaaaact
ttcagcacgatgcacgagcttgtgacccatctcacggtggagcatgtcggagggccagag
cagtcgaatcatatttgtttttgggaagagtgcgcccgagaagggaaacctttcaaggcg
aaatacaaacttgtaaatcacatccgagtgcatactggagaaaagcccttcccatgtcca
ttccccggctgtggcaaggtgtttgcacgatcggaaaatcttaaaattcacaaaaggaca
cacactggtgagaaaccatttaagtgtgagttcgaaggctgcgacaggcgttttgcaaat
agcagcgaccgcaagaaacacatgcacgtccatacgtctgacaagccctatctctgcaaa
atgtgtgacaaatcgtacacacaccccagctccctccgaaaacacatgaaggttcacgaa
tcctccactcaaggttcacaaccatctccagcggccagttcagggtatgagtcttctacg
cctcccaccattgtatccccatccacagagaaccagagcagcagttccatatcgccagca
tcttcgacagtacatcacacgaccagtcacagcacgctgtcgtcaaattttaatgaatgg
tacgtgtaa
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