Alosa sapidissima (American shad): 121688281
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Entry
121688281 CDS
T11137
Name
(RefSeq) tetratricopeptide repeat protein 21B-like
KO
K24178
tetratricopeptide repeat protein 21A
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asad03037
]
121688281
Cilium and associated proteins [BR:
asad03037
]
Motile cilia and associated proteins
Sperm associated proteins
121688281
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_TT21_N
ARM_TT21_C
ARM_TT21_2nd
ARM_TT21
ARM_TT21_5th
TPR_19
ARM_TT21_4th
TPR_14
TPR_16
TPR_2
TPR_1
TPR_17
ANAPC3
TPR_11
TPR_6
CFAP70_TPR_C
TPR_12
TPR_8
Fis1_TPR_C
TPR_7
TPR_Psidin_N
TPR_CcmH_CycH
RMD1-3
TPR_Slam
TPR_NUP160_120_M
TPR_YpiA_C
DUF7017
CFAP70_mid_TPR
Motif
Other DBs
NCBI-GeneID:
121688281
NCBI-ProteinID:
XP_041923691
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All DBs
Position
17
Genome browser
AA seq
1318 aa
AA seq
DB search
MAEDHPVCLASVMYYFRDGQYRQAISSAVEYLKMYHHDPVLQLLKALGILMEGRTQESMR
ELQQLKDKSSVSLASMLALIFAHRKCETVDREAVSDLEALLRSSRKRAGEKALLYAAMTL
WLLGHCAKGRDYIDRAVKMSNSSPQALIMKGWMLLSSETDQQRSQAVHCFDSGVQDSIHV
FGLIGKVEFFLMKQNYSWAMDVVNQVIASFPSFTPALSLKMAVFMASQDWEHVREMCDRI
FEHDKWNLRARQMMVILALAKDGDLAQAKDHLQSLISALEMQEPSNPKLHADMVLPISRL
CVQSDAAVLQVLVSFLLRVHAKAAGDADVANELGHLLLIQGKPKEATKWFSTALKAEESS
LTALTGLVRCQLLSGEEVEAAQQLEFLTEIQQTIERSADVSFLRALSLNRNGGEQESVTS
LLKEAVELHLLQLRGVPLGPDYLYRLDPNFLFQVVLLHLSYIQTEVHAQGQPLPFGLKHC
VMILDVVLRAAPGILTCSYLTAFVKFLSGDCKVAQTYLSQCLEREPTLAPAHVLQARIHL
AARDYKQCLSSLECGVSHNFQVRELPGYHLLKARCQREMGDLEEAIRSLRLLMSLPGIRM
PIPGRQDTFTSSERASVFLELAHTLRLNGEEHEATKVMQDAILSFTDTPEESRVLVANVD
LALAKNLVDTAISMLRSVEPSQPNYIEAKEKMAAIYLDRKKNKNLYIACYRELCEVIPNA
HTSVLLGDAYMKIQEPEKAITVYLEATEKAPKDPTFARKIGQAYVKTHQYDKAVAYYEMA
LDNHMQDALCLELIELLIKMKQFDKAQLVLRKALSTEATSELATMLSYVGYLKVLARIQE
EINVSPEETLKKALSLQRKVLRRVSVEQPEQLVQQAAVASWLFCALARIRPHLEEAILCY
TEALHHTPADANISLEMAQLYLKHNKLDQCRDHCEAAVTSQPNHPDATMLLGDVLFRQAK
HEEAVKVYADLARHLPDNFRVMAKFVELLRRVGKLEDIVPFFTVCERFSCKAPYDAGYNY
CRGLYLWHRNQVTDALMHLNKSRQDSEWGEKALDLMVQICLNPDKETFAGQMFQPSTEDE
GSAPSDGPAESKGDEGTQVGLTTAQSLLKELCPRSKAGVQRGHLLFNLLRLHTKEEPLVQ
SAATAFSDMMAGKSDRESVSALLGLSQAFMLQNQAPRARNQLKRLSRVEWSEEYAEDLER
GQLLLTDMYIKSGKYDIATKLAKHCLIHNKSCWKALEYLGYIYESEHSYRDAAVYYAEAW
RYSYRVNPTIGYRLAFNYLKYKNYTEAIDVCHKVLEEHPDFPQIETDILNRAQVSLRP
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagatcacccagtatgcctagcttcagttatgtactacttccgagatgggcag
tatcgacaagccatcagttcagcagtagagtatctgaaaatgtatcaccacgacccagtg
cttcagctattaaaagctcttggcattttgatggaaggtcgaacccaagaatccatgcga
gagttgcagcagctaaaggacaagtccagtgtctctcttgcatccatgctggccctgata
tttgcacacagaaaatgtgaaacagttgatcgagaggctgtttctgacctggaggcgttg
ttgcgctccagtcgtaagagagcgggagagaaagcgctgctgtacgctgccatgaccttg
tggttgttgggtcactgtgctaaaggccgggactacatcgacagggccgtgaagatgagc
aacagttcaccacaggctttgatcatgaagggctggatgctgttgagctccgagacagac
cagcagaggtcccaggctgtgcactgcttcgatagcggggtgcaggactccattcatgtg
tttggacttattggcaaggtggagttctttctgatgaagcagaactactcgtgggccatg
gatgtggtgaaccaggtcatcgcctccttcccctccttcactccagctctctcgctcaag
atggccgtcttcatggccagccaggactgggagcacgtcagggagatgtgtgacagaatc
tttgaacatgataagtggaacttgagagcacgtcagatgatggtcattttggctttggct
aaagatggagacttggcgcaggcaaaggaccacctccagtccttgataagtgccctagag
atgcaggagcccagcaaccccaaactccatgcagacatggtcctgcctatcagcaggctg
tgtgtgcagagtgacgcggcagtgctgcaggtcctggtctccttcctgctgcgagtccac
gccaaggccgcgggagatgctgacgttgccaatgagctgggtcacctgctgttgatccag
ggcaaacccaaagaggctaccaagtggttctctacagccctcaaagcagaggagagcagc
ttaacggccctgaccggtctggtgcggtgccagttgctgagtggtgaagaggtggaggca
gcccagcagctggagttcctcactgagattcagcagacaatagaacgctctgcagacgtg
tcgttcctgcgagcgctctcattaaacaggaatggcggtgagcaggaaagtgtgaccagt
ctgctgaaggaagctgtggagctccacttgctccaactgaggggcgtccccctgggccca
gactacctgtacaggctcgaccccaacttcctcttccaagtggtgctgctgcacctctcc
tacatccagacggaggtccatgcccagggccagcctctgccctttggcctgaagcactgt
gtcatgatcttggacgtggttctgagggccgctccggggatactcacctgctcctacctc
acggccttcgtcaagttcctgtcaggtgactgtaaggtggcgcagacgtacctgagccag
tgtctggagcgggagcccactctggccccggcccacgtgctccaggcccgtatccacctg
gcggcgcgcgactacaagcagtgcctcagcagtctggagtgtggcgtctcacacaacttc
caggtgcgtgagctgccggggtaccacctgctgaaagcacgttgtcagcgtgagatgggg
gacttggaggaggccatccgctccctgcggctcctgatgagtctgcccggcatccggatg
cccatcccagggagacaggacaccttcaccagcagtgagagggcctctgtgttcctggag
cttgctcacacactccggctcaacggagaagagcacgaagccaccaaggtgatgcaggac
gccatccttagcttcactgacaccccggaggagagccgtgtgctcgtggccaatgtggac
ctggcgttggccaagaacctggtggacacagccatcagcatgctgcgtagcgtcgagccc
agtcagcccaactacatcgaggccaaagagaagatggcggccatctacctggacaggaag
aagaataaaaacctctacatcgcctgctacagggagctctgtgaagtgatacctaatgct
cacacgagtgttctcttaggtgacgcctacatgaaaatccaagagccagagaaggccatc
acagtctacctggaggcaacagaaaaagcccctaaagacccaacgtttgcccggaagatt
ggccaggcatatgtgaaaacccaccaatatgacaaggccgtggcctactacgagatggcg
ctggacaaccacatgcaggacgctctctgtctggagctcatcgagctgctcatcaagatg
aagcagtttgacaaagcgcagctcgtcctgcgcaaggccctaagcaccgaagccacgagt
gagttggccaccatgttgagttatgtggggtacctgaaggttttggcgcgaatccaagag
gaaataaatgtctctccagaggaaacattaaagaaggctctgtccctccagaggaaggtg
ttgcgccgtgtgtccgtggagcagccggagcagctggtgcagcaggcagccgtggcctcc
tggctcttctgtgccctggcccgcatcaggccacacctggaggaggccatcctgtgctat
acggaggccctgcaccacacacctgcagacgccaacatttcactggagatggctcagctg
tatctgaagcacaacaaactggaccagtgcagggaccactgtgaggcagcagtgacgtcc
cagcccaaccacccggatgccaccatgctcctgggagacgtgttgttccgccaggcgaag
catgaggaagctgtgaaggtgtatgcagacctggcccggcacctcccagataacttccgg
gtcatggccaagtttgtagagctcctgaggagagttgggaagctggaggacattgtgccg
tttttcacggtgtgtgagcgcttctcctgcaaggctccttatgacgctggctacaactac
tgcagagggctctacctgtggcacaggaaccaggtgaccgacgcactgatgcacctgaat
aagtcccggcaggactctgagtggggcgaaaaggccttggacctgatggtccagatctgc
ctgaacccagacaaggagacattcgccggacagatgttccagcccagcacagaggatgag
gggagtgcccccagcgacggcccagcagagagcaagggggacgaggggacccaggtgggc
ctgaccaccgcccagagcctgctgaaggagctgtgtccacgctccaaggccggcgtgcag
cgcggccacctgctcttcaacctgctgcgcctccacaccaaggaggagcctctcgtccag
agcgccgccactgccttcagcgacatgatggccggcaagtctgacagagagagcgtgtct
gccctgctggggctgagccaggccttcatgctgcagaaccaggctccgcgggctcggaac
cagctcaagcggctctcccgggtggagtggagcgaggagtacgcggaggacctggagcgt
ggccagctactgctgaccgacatgtacatcaagtccgggaagtacgacatcgccaccaag
ctggccaagcactgcctcatccacaacaagtcctgctggaaagcgctagagtaccttggc
tacatctatgagagtgagcactcatacagagatgctgctgtatactatgccgaggcctgg
aggtacagctatagagtcaaccccaccataggatatcggctggctttcaattacctcaag
tataaaaactacactgaggccatagacgtttgccacaaggttttggaggagcaccctgac
ttcccccagattgagacggatattctgaaccgggcccaggtgtctctgagaccgtaa
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