Alosa sapidissima (American shad): 121688378
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Entry
121688378 CDS
T11137
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121688378 (scrib)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_14
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_LRWD1
LRR_9
LRR_13
Motif
Other DBs
NCBI-GeneID:
121688378
NCBI-ProteinID:
XP_041923850
LinkDB
All DBs
Position
17:12277482..12362519
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AA seq
1871 aa
AA seq
DB search
MRSQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKALEIADFSGNPLSSLPDGFTQLR
GLAHLALNDVSLQTLPSDIGNLANLVTLELRDNLLKSLPTSLSFLVKLEQLDLGSNVLEV
LPDTLGALPNLRELWLDRNQLTSLPPELGNLRRLVCLDISQNRLEELPNELSGLLALTDL
LLSQNLLEVIPDSIGSLKQLSILKVDQNRLLQLTDSLGECENLTELMLTENLLQSLPRSL
GKLKKLTNLNVDRNRLGTVPPELGGCACLNVLSLRDNRLAKLPAELADATELHVLDVAGN
RLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDDEQTGEKVLTCYLLPQQPTPSLENLL
QNSVDESWTDSNLNRVSVIHFQEEAKPEEEDDEAAAERRQGLQRRATPHPSELKVMKKVI
EERRNEAYTAKPDGDLESPDSEEKRLSGVSNQSHDSQASNSTASATSHDERQGLNNQREA
LVDGHRHDQEDEELDEMEVEYIEPTVHFAEEPIIRGGDDDEDDDEDNDDGGSDDNAEPPP
PYPGQKQRLIRKDTPHYKKHFKITKLPKPEAVAALLLQGYNPDSLPHSPHEQNNAEEEEE
EEEEEERKDMRQREEEEDDEEQGVSASTPLLQRTPGPELENSRLLHVNSSLQPVKGVSFD
QVNNLLIEPARIEEEELTLTIHRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAA
RAGVKVGDKLLEVNDVLLQGAEHHTAVEALRSSGAAVTMTVLRERMVEPENAITTTPLRP
EDDYFPRERRASGVPFCMEPGSPAPSTDTFRLSTCLLRNDKGLGFSIAGGKGSTPYRTGD
TGIFISRIAEGGSASRDNVLKVGDRVISINGVDMTEARHDQAVALLTGTSPTIALLVERE
QGPHAGRGRAHSPPPPEPSDSPEQEEPNDEHANHLSRTMEDEYPIEEVILVKAGGPLGLS
IVGGSDHASHPFGVNEPGVFISKVIPHGLACQSGLRVGDRILEVNTTDLRHATHQEAVRA
LLSNKHEIRMLVRRDPSPPGMQEIVIMKQPGEKLGISIRGGARGHAGNPFDATDEGIFIS
KVSSTGAAARDGRLLVGMRILEVGNHSLLGMTHTEAVRVLRSTGDTLVLLVCDGFDPRNV
TGIESSPGVIANPFAGGIVRKNSMESISSIDRDLSPEEMDILQKEVEMARETSQWEREEM
EKVERMRLEREEATRQLEEEAENISAGPLKLDYKTLAALPTTSLQKVNRAPSTDAQRTDS
PIRDVSYSPSSQPPSVKQHSSPAQPAAGRETRFASIHFTSNATPKDNSSTKPGVIQPMSR
MRQTASPVSQDGHSSPNPFQHGPSPINSQTSPRAPSPDTIEEFPINIKQAYKAFAAVPHS
LAVLEPPQDKFGQRNNVHPVQPSPESDGGDDVFTDEVEVDGGSDSVFPRPSLASEDYATL
AAVPRLSRPTVEFKTPRPMGRNSPEQRSFRDRQKYFEIDVKQQTPDNKPKPRVSLVGEDD
LKKMKEEEAKRFDQCARDYLLDEEEEEEEDLAKQVAAMKASGKVLLDGVEYKVESVGGNN
SHAATPPRMCATPPSYNSTPPSYCGTSGPSSIDGRGDSQRNSMEETFRLDQRPNSMTGLV
PMYPGVESAAPIRTAKAERRHQDRLRMQSPELAIASDKELSPAEKRALEAEKRAMWRAAR
PYGLEEDVRQYEQDLAKRLYQSRVRASQASANTNPNPSSSSSSFQPRMKSLEQDALKAQM
VIAKSKENKKRSTLDQLVESPSPAPTPSPTPLDDISPRGVTSPGRLSLSEKKFDYRQFAA
IPSSKPVYDIESPDTADNMRYIDDGSSNPAVGADVEVSAVVGSSALEEMALYSNKRKLRQ
ARRSLETAVPT
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atgagatcccagcgactcccgccagaggtggcaaactttatgcagctggtcgagctggac
atctccagaaatgacattcctgagatccccgagagcattaagttctgcaaagcgctggag
atcgccgacttcagcggaaaccccctctccagtttgccagatggcttcacacaactccga
ggccttgcccacctcgcactcaacgacgtgtctctgcagactctacccagcgacatagga
aatctggccaacctggtgaccctggagctgagggacaatctgctgaagtctttgccaacg
tctctgtcctttcttgtaaaactggagcagctggatctgggcagcaatgtgctggaagtc
ctgccggacacactgggagccctcccgaacctgcgtgagctgtggttagacaggaaccag
ctgacctcattgccacctgagctgggaaacctgcgccgacttgtgtgcctggacatctcc
cagaaccgtctggaggaattgcccaatgagctcagcggcctgctggctctcacagacttg
ctgctctcccagaacctcctggaggtcatccccgacagcatcggctccttgaagcaactg
tccattctgaaagtggaccagaaccggcttttgcaactcacagactccctgggagagtgt
gagaacctgacggaactcatgctgaccgagaacctcctgcagtctctgccccgctcgctg
gggaagctcaagaaactgaccaacctgaacgtggaccggaaccggcttggcacggtgccc
cctgagctgggcggctgtgcctgtctgaacgtgctctcgctgcgggacaaccggctggcc
aagctgcccgctgagctcgctgacgccaccgagctgcacgtgctggacgtggctgggaac
agactgcagaacctgccatttgctctggctaacctgaacctgaaagccatgtggctggca
gagaaccagtcgcagcccatgctcaagttccagaccgaggatgatgagcagaccggagag
aaggtgctaacctgctacctcctaccccagcaacccacgcccagccttgagaacctacta
cagaacagtgtggatgagtcctggacagacagcaaccttaaccgcgtgtcggtcatccac
ttccaagaggaggccaagccagaggaagaggacgacgaagctgctgctgagagaaggcag
ggtctccagcgcagggcaactccccaccccagcgagctgaaggtgatgaagaaggtgatc
gaggagcgcagaaacgaggcctacaccgccaaaccagacggggacctggagtctcccgac
tcagaggagaagcgcctgagtggagtgtccaatcaaagccacgactctcaggcctccaac
agcactgcctctgcgacctcccatgatgagaggcagggcctcaacaaccagagggaggct
ctggtggacggccacagacacgaccaggaggacgaggaactagatgagatggaggtggag
tatattgagcccactgtgcactttgctgaggaacccatcatccgaggcggtgacgatgat
gaagacgatgacgaggacaatgacgatggcggtagcgacgacaacgccgagccgcctccc
ccataccctggccagaagcagcgcctgatccgcaaggacaccccacactacaaaaagcac
ttcaagatcaccaagctgcccaagcccgaggccgtggccgccctcctgctacagggctac
aaccccgatagcctcccccactccccgcacgagcagaacaatgcagaagaggaggaggag
gaggaggaagaggaggagcgaaaggacatgagacagagagaggaagaggaggatgatgag
gagcaaggggtgagcgcttctacgccgctgcttcagcggacgccgggcccagagctggag
aacagccggctgctgcacgtcaactcctccttgcagccggtcaagggggtgtcatttgat
caagtcaataatctgctgattgagcctgctcgaattgaggaggaagagttgaccctgacc
atccacaggcagacaggaggtctgggtatcagtattgccggtggaaagggctccacaccc
tataagggggatgatgagggcatcttcatctcgagagtgtcagaggaggggcctgctgca
cgcgcaggagttaaagtgggagacaaactcctagaggtgaatgatgtcctcctgcagggt
gctgagcaccacacagcagtggaggctctgcggagctcgggtgcggccgtcaccatgacg
gttctgcgggagcggatggtggaaccggagaacgccatcaccaccacgccgctgcggccc
gaagacgactacttcccgcgggagcggcgcgccagcggtgttccgttctgcatggagccc
ggctcgcccgcacccagcaccgacacctttcgcctgtccacatgcctgctgcgcaacgac
aagggtctgggcttcagcatcgctggaggaaagggctccacaccctaccggactggagac
acgggtattttcatctctcgtattgcagagggcggatcagcgtccagagacaacgtcctc
aaagtgggagacagggtcatctctatcaatggtgtagacatgacagaggccaggcatgac
caggcagtagcgttgcttaccggcacctcccccaccatcgccctgctggtggagcgcgag
cagggcccccacgccggccgcggccgagcccactcccccccgcccccagagccttccgac
tcccccgagcaggaagagcccaacgacgagcacgccaaccacctcagccgcaccatggag
gacgagtaccccatcgaggaagtgatattggtaaaagcaggtggaccgctaggactgagt
atcgtgggtggcagtgatcacgcaagtcacccgtttggcgtcaatgagccgggggtcttc
atctctaaggtgatcccccatgggctggcgtgtcagagtgggctgcgtgtgggcgatcgg
atcctggaggtgaacaccaccgacctgcggcacgctacacaccaggaggcggtgagagca
ctgctctccaacaagcacgagatccgcatgctggtgcgccgggacccctccccacctggc
atgcaggagatcgtgatcatgaagcagcctggtgagaagctgggcatcagcattcgagga
ggagccagaggccacgctggaaacccctttgacgccacagatgagggcatctttatctcc
aaggtgagctccacaggggcggcggcgcgtgacggacggctgctggtgggcatgcgtatc
ctggaggtgggcaaccacagcctgctgggcatgactcacacggaggcggtgcgggtgttg
cgctccaccggagacacgctggtgctgctggtgtgcgacggcttcgaccctcgcaacgtc
acaggcatcgagtcttcacctggggtcatcgccaacccgtttgcaggtgggattgtccgg
aaaaacagcatggagagcatttcatccatcgaccgagacctcagccctgaggagatggac
atcctgcagaaggaggtagagatggcaagagagacctcccagtgggagagggaggagatg
gagaaagtggagcgcatgcgtttggagcgcgaggaggccacacggcagctagaggaggag
gccgagaacatcagcgccggtcctctgaaactggactacaagacactggcagcactaccc
acaaccagcctgcagaaggtcaaccgggcaccctccacagacgcccagaggacagacagt
cctattcgtgacgtgtcctactcacccagctcccagcccccgtctgttaagcagcactcc
tccccagcccaaccggcagctggcagagagacccggtttgccagtatccatttcacctct
aatgccactcccaaggacaattcatctaccaagccgggtgtgatccagcccatgtctcgc
atgaggcagacggcctcgccagtcagtcaggatggccacagcagccccaaccccttccag
catggcccctcccccatcaactcccagacttctccacgcgccccttcccctgacacaatt
gaagagttccccatcaatatcaagcaggcctacaaggcctttgccgctgtgccccactct
ctggcagtgctggagccgcctcaggacaaatttggtcagcggaacaatgttcaccctgta
cagccatcccctgagtccgatgggggagatgatgtgttcacagatgaggtggaggtggac
gggggatcggactcagtcttcccccgcccctcccttgcctcggaggactacgcaactctg
gcagcagtgccacgtctttcgcggcccactgtggagtttaagacgcctaggcccatggga
aggaacagcccagagcagcgctccttcagggatcgacagaagtactttgagatcgacgtg
aagcagcagactccagacaacaagcccaagccccgtgtctccttggtgggggaggatgac
ttgaagaagatgaaggaggaggaagcaaagcggtttgaccagtgtgcacgggactacttg
cttgatgaggaagaggaagaggaggaagaccttgccaaacaagtggctgcaatgaaggcc
agtggaaaggtgctgctggatggcgtggagtacaaggttgagagtgtgggtgggaacaac
tcacacgctgccacgccccccaggatgtgtgccactccccctagctacaactccacaccg
ccaagctactgtggaacatccgggccttcatcaattgatggcagaggagactcccagaga
aactccatggaggagactttcagactggaccagaggcccaactccatgactggactcgtg
cccatgtaccctggtgttgagtctgccgcacccatccgcactgccaaggcggagcgcagg
caccaggatcgtctgcgcatgcagagccccgagctggccatcgcatcagacaaggaactg
tcgcccgcagagaagcgtgccctggaggccgagaagagagccatgtggagggcggccagg
ccttatggcctagaggaggatgtcaggcagtatgagcaggatctggccaagagactgtac
cagtccagagtgcgggcgtcgcaagccagtgccaacaccaaccccaacccttcctcctct
tcctcttccttccagcccaggatgaagtctctggagcaggatgccctaaaggcccagatg
gtcattgccaagtccaaggagaacaagaagcgcagcacactggaccagctggtcgaatcg
ccctcgccagccccgaccccctcccccacacctctggatgatatcagtcctcgaggtgtg
acatcaccaggcagactgtccctgtcagaaaagaagtttgactaccgacagtttgccgcc
attccttcttccaaacctgtttacgacatcgagtctcccgacactgctgacaacatgcgc
tacattgatgacggctccagcaacccagcagtgggtgctgatgtggaggtttctgctgtg
gtgggcagctctgctctggaggagatggctctctacagcaacaaacgcaaactccgccaa
gctcgtcgcagcctagagacagcagtgcccacataa
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