Alosa sapidissima (American shad): 121688573
Help
Entry
121688573 CDS
T11137
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121688573 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121688573 (nup58)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121688573 (nup58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
PSY3
FapA
Siah-Interact_N
NET2A_C
Nup49_C
Phage_int_SAM_2
PBC
Leptin
Motif
Other DBs
NCBI-GeneID:
121688573
NCBI-ProteinID:
XP_041924181
LinkDB
All DBs
Position
17:complement(32425307..32441663)
Genome browser
AA seq
600 aa
AA seq
DB search
MSGFSFGTTTLGAPNTGGGFSFGAATSAPAAPANTTGFSFGGLGGAASTPVAAAAATTTT
SASLFGGSGLLAQKPAGGFGFGTPAAGAAAAAPSTGLTLGAPAAPTAANTGFSFGKPAAS
ATPFSLTTTSSAPATGLTFGSGLTSTAPQTSLPGFSLNLGAAATSSAAPSTGLSLGSSLF
SSAVPTGLGQPTLGGGLTLGGGLTLGSLVSSAATTTAAAPSLGLGGVDFSTSSEKKNDKS
SGVSPQDSKALKDENLPPVICQDVDNFQKFVKEQKQVQEEISRMSSKAMLKVQDDIKNLK
QLLSVSASGLQRNALAIDKLKMETAQELKNADIALRTQKTPPGLQHENTAPSDYFRGLVE
QFEVQLQQYRQQIEELENHLTTQGSGSHITPQDLSLAMQRLYQTFVALAAQLQTVHENVK
ILKHQYLNYRRAFLEDSTDVFESKRAATKKYQSAPRVTTGPAPFSSVPNATAVAMAATLT
QQQQPAPGSQAALGAGFGVPFAPGMGSSGLGAAFGSGPGFGNVATGSSSFGFSSSKPSGG
SLSAGFGSSSTSGFNFSNPGINASAGLTFGVSNAPAAGFGTAAPLLQLKKPPAGNKRGKR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggttcagttttggaacgaccacgttgggggcccccaatactggaggagggttt
tcttttggagctgcaacaagcgcccctgcagcgccagcgaacacgactggtttttcattt
ggaggtcttgggggcgctgcttccaccccggttgctgctgctgctgccacaacaactacc
tccgcaagtttattcggaggtagtggcctgttagctcagaaaccagctggcggctttggc
tttggtacacctgccgcaggggctgctgcagctgcaccaagcactggcctcacactaggt
gctcctgctgcacccactgctgctaatacaggtttcagctttgggaagccggctgcctcc
gccacacctttctccctgacgaccacctcctctgccccagccactggcctcacctttggc
tctggcctcacgtccacggcgccgcagaccagcctgccggggttctcccttaacctcggc
gccgcggcaaccagctccgcggccccctccactggcctgtccctcggctccagcctcttc
tccagcgcagtgcccactggtttggggcagccaactctgggtggaggtttgactttgggt
ggaggtttgactttgggatctttggtgtcctctgctgccacgacaacagctgctgcgccc
agcctcggcctgggtggggtggacttcagcacctcctcggagaagaagaacgacaagtcc
tccggtgtcagtccacaagacagcaaggctcttaaagatgaaaacctacctccagtcatc
tgccaggacgtggacaacttccagaagtttgtgaaggagcagaagcaggtgcaggaagag
atcagtcgcatgtcgtccaaggccatgctgaaggtgcaggacgacatcaagaacctgaag
cagctgctctccgtcagcgccagcggcctgcagaggaacgcgctggccatcgacaagctc
aagatggagaccgcacaggagctgaagaatgctgacattgccttgagaactcaaaagacc
ccgccgggactgcagcatgagaacactgctccatcagattatttccgcggcctggtggag
cagtttgaggtccagctgcagcagtaccgccagcagatcgaggagctggagaaccacctg
accacccaggggagcggctcccacatcaccccgcaagatctttccttggcgatgcagaga
ctctatcagacgtttgtggccttagctgctcaactacagacagtgcatgagaatgtgaaa
atcttgaagcaccagtacctgaactaccggagggcgttcctggaggactccactgacgtg
tttgagtccaagcgtgccgccaccaagaagtatcagagtgccccgcgcgtcaccaccggc
cccgcaccgttcagcagcgtccccaatgccacggccgttgccatggcagccacactgacg
cagcaacagcagcctgctccagggtcacaggccgccctgggggctggctttggggttccc
ttcgccccaggcatgggctcttctggcctcggagcagcgtttggaagcgggcctgggttc
ggcaacgtggccacgggcagctcctcgtttgggttctcctccagcaagccttcaggtggc
agtttgagtgcaggttttggcagctccagcacgtcaggttttaacttcagcaaccctggt
atcaacgcctcagccgggctgacgtttggcgtgtccaacgctccggcggcagggttcggc
accgctgctcccctcctgcagctgaagaagccccccgcgggcaacaagcggggcaaaaga
taa
DBGET
integrated database retrieval system
