Alosa sapidissima (American shad): 121688626
Help
Entry
121688626 CDS
T11137
Symbol
chpf2
Name
(RefSeq) chondroitin sulfate glucuronyltransferase
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
asad01100
Metabolic pathways
Module
asad_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121688626 (chpf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
asad01003
]
121688626 (chpf2)
Enzymes [BR:
asad01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
121688626 (chpf2)
Glycosyltransferases [BR:
asad01003
]
Glycan extension
O-Glycan
121688626 (chpf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
121688626
NCBI-ProteinID:
XP_041924272
LinkDB
All DBs
Position
17:12511026..12522610
Genome browser
AA seq
767 aa
AA seq
DB search
MRLSSFLAVFRPALPLILGLSLGCSLSLLMVSWTQGDTEETCGDELGNGGLFAGGHLGES
QDNLAGGAGNEDFQPRIVPYHKDPNKPHKKVLRTRYIHTELGIRERLLVGILTSRATLNT
LGVAVNRTVAHHFHRTFFFTGLRSAKAPHGMSVVTHGDDRPVWLMYETVRHLHQHHGNDY
DWFYLAQDDTYTQAERVMELAGHLSAGQDLYMGRAEEFIGGDERARYCHGGYGYLLSRSL
LARLQTHLDSCRNDILSVRPDEWLGRCIIDYLGLSCVEVHQEMTYRYFELRKNADPERED
SPQFKNAFTVHPVSEPGLMYRLHKRFSQIELDWTYTQIQQLQAQISNLSELTPEGKAGTT
WPVGINPPFHPKTRFEVINWEYFTEDHIYSCADSAPKCELRGADRADVSAVLETAVERLN
ERYQPQLRFSKRRLLNGYRRFDPTRGMEYQLDLALEAYTQKGHSQVIAKRVGLLRPLSAV
EIIPMPYVTEATRVQVILPVTAREQDYVGNFLDAYVMNALDTRDNVLLAFLFVYDPFDAQ
RVSQTDVFAGAKAMIGEVEKRYADVKIPWISVKTEVPSQVKLMDIISKKHPVDTLFYLAS
VWTEVNADFLNRCRMNAISNWQVFFPIHFQEYSPALVYRDQQPSASSSSSLGSDTLHDGH
FDRHVFEEACFYNADYMAARTKMAADILDNDELLESMDVYDVFVRYSGLHVFRAVEPALV
QKYVRRTCNPRFSEDIYHRCMLSNLEGLASRSHLAMALFEQEQANST
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctctcatctttcctcgccgtattccggcctgccctccccctcatcctggggctt
tctttgggctgcagcctgagtctgctgatggtgtcatggactcagggggacacggaggag
acctgtggtgatgagcttgggaatggaggtttgtttgccggcggtcatttgggagaatct
caggataacctggcgggtggagctggaaacgaagacttccagccacgtattgtgccctat
cacaaggaccccaacaaaccacacaagaaagttctcaggacgcgctatatccacacggag
ctgggcatccgagagcgcctcctggtgggcatcctgacgtcccgcgccaccctgaacacg
ctgggcgtggcggtgaaccgcacagtggcgcaccacttccaccgcaccttcttcttcacg
ggcctgcgtagcgccaaggcgccgcacggcatgtcggtggtgacgcacggcgacgaccgg
cctgtgtggctcatgtacgagacggtgcgccacctgcaccagcaccacggcaacgactac
gactggttctacctggcgcaggacgacacgtacacgcaggctgagcgcgtcatggagctg
gcgggccacctgagcgccggccaggacctgtacatgggccgtgccgaggagttcatcggc
ggcgacgagcgcgcgcgctattgccatggtggctacggttacctgctctcacgcagcctg
ctggcccgcctgcagacgcacctggactcctgccgcaatgacatcctcagcgtcaggcct
gacgaatggctgggccgctgcatcatcgactatctgggtctgagctgcgtggaggtgcac
caggagatgacgtaccgttactttgagctccgtaagaacgccgaccccgagcgtgaggac
agcccacagttcaagaacgccttcaccgtgcacccggtgtccgagccaggcctgatgtac
cgcctgcacaagcgtttcagccagatcgagctggactggacctacactcagatccagcag
ctgcaggctcagatcagtaacctgagtgagctgacccccgagggcaaggctggcaccacg
tggcccgtgggcatcaacccgcccttccaccccaagacccgctttgaggtcatcaactgg
gagtacttcaccgaggaccacatctactcgtgcgccgacagcgcgcccaagtgcgagctg
cgcggtgccgaccgcgccgacgtgagcgccgtcctcgagacggccgtggagcgcctcaac
gagcgctaccagcctcagctgcgcttcagcaagcggcgactgctcaacggctaccgacgc
tttgaccccacgcggggcatggagtaccagctggacctggcgctcgaggcctacacgcag
aagggccacagccaggtgatcgccaagcgcgtgggcctcctgcgtccgctcagcgctgtg
gagatcatccccatgccctacgtcacggaggccacgcgcgtacaggtcatcctgccggtg
acagcgcgtgagcaggactacgtgggcaacttcctggacgcatacgtgatgaacgcgctg
gacacgcgcgacaacgtgctactcgccttcctgtttgtctacgacccgttcgatgcgcag
cgcgtcagccagacggacgtgttcgccggcgccaaggccatgataggcgaagtggagaag
cgttacgccgatgtcaagatcccctggatcagcgtcaagaccgaagtgccctcgcaggtc
aagctcatggacatcatctccaagaagcacccagtggacacgctcttctatctggccagc
gtgtggaccgaggtcaacgccgacttcctcaaccgctgccgcatgaacgccatcagcaac
tggcaggtcttcttccccatccactttcaggagtacagtccggcgctggtctaccgcgac
cagcagccctcggcctcctcctcctcgtcgctgggctcggacacgctccacgacggccac
ttcgaccggcacgtcttcgaggaggcctgcttctacaacgccgactacatggcggctcgc
accaagatggccgccgacatcctggacaacgacgagctgctggagagcatggacgtgtac
gacgtcttcgtgcgctactcgggcctgcacgtgttccgcgccgtggagccggcgctggtg
cagaagtacgtgcggcgcacgtgcaacccgcgcttcagcgaggacatctaccaccgctgc
atgctcagcaacctggaggggctggcctcgcgctcgcacctggccatggcgctgttcgag
caggagcaggccaacagcacctaa
DBGET
integrated database retrieval system
