Alosa sapidissima (American shad): 121688812
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Entry
121688812 CDS
T11137
Symbol
cadm1b
Name
(RefSeq) cell adhesion molecule 1b isoform X1
KO
K06781
cell adhesion molecule 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121688812 (cadm1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asad04515
]
121688812 (cadm1b)
Cell adhesion molecules [BR:
asad04515
]
Immunoglobulin superfamily
Nectin family
121688812 (cadm1b)
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
C2-set_2
V-set
C1-set
C2-set_3
Adhes-Ig_like
Mid2
FAS_meander
Motif
Other DBs
NCBI-GeneID:
121688812
NCBI-ProteinID:
XP_041924607
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Position
17:19813554..20027904
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AA seq
423 aa
AA seq
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MAISVSGSLSIPLAVLMFLAAFGLKGAAQIVPVQGQNLVTDNVSVVEGETATISCRVKNN
DDSVIQLLNPNRQTIYFRDVRPLKDSRFQLVNFSDNELRVSLSNVSLSDEGRYVCQLYTD
PPQEAYADITVLVPPGNPIIESREEVVSEGNETEISCTAMGSKPAASITWIKGDQELQGE
STVEETYDRMFTVTSRLTLTVSKEDDGMPVICVINHPAVKDFQAQKYLEVQYKPEVKIVV
GYPEGLTREGENLELTCKAKGKPQPHRITWFKVDDDVPSHAVITGSDLFIENLNKSYNGT
YRCVASNLVGEAFDDYILYVYDALTSTPTPSTTTIISDNSQDSRAGVGSPQKIDHAVIGG
VVAVVVFIMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHSNSDNKKE
YYI
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctcggttagcggatctctctctattcctctcgctgtattgatgtttttggca
gcgtttgggttgaaaggagcagctcagatcgtgccagtccaagggcagaacttggtgacg
gacaacgtgtcggtggtggagggggagacggccaccatcagctgcagagtgaagaacaac
gacgactccgtcattcagctgcttaaccccaacagacagaccatctacttcagagacgtc
agacctctgaaagacagtcgcttccagcttgttaacttctcagacaacgagctgcgcgtg
tctctgtccaacgtgtcgctgtcggacgagggccgctacgtatgccagctctacacagac
cccccacaggaggcctacgcagacatcactgtactggtccctccaggaaacccgatcata
gaatcccgcgaggaggtggtcagcgagggcaacgagacggagatcagctgtaccgccatg
ggcagcaaacccgccgcctccatcacttggataaagggtgaccaggagctgcaaggtgag
tcgacggtggaggagacgtacgaccgcatgttcaccgtcaccagccgcctcacactgacc
gtctccaaggaggacgacggcatgccagtcatctgcgtcatcaaccacccagccgtgaag
gacttccaggcccagaagtacctggaggtgcagtataaacctgaggtgaagattgtggtg
ggctaccccgaggggctaactagggagggggagaatctggagctgacctgcaaggccaaa
ggcaaacctcagccccaccgcattacctggtttaaggtggacgatgacgtgccctcgcac
gccgttatcaccggctctgacctcttcatcgagaacctcaacaaatcctacaacggcacg
taccgctgtgtggcctccaatctggtgggagaagccttcgacgactacatcctctatgtc
tacgatgctctcacttcaacccccacaccctccactactaccatcatctctgacaactcg
caagattcccgggctggggtgggatctccacagaagatcgaccacgccgtgattggaggt
gtggtggctgtggtggtcttcatcatgctctgcctcctcatcatcttgggacgctacttt
gccagacataaaggcacttatttcacacatgaagccaaaggcgcggatgacgcagcagac
gccgacacggccatcatcaacgctgagggcggccatagcaactccgacaacaagaaggag
tactacatctaa
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