Alosa sapidissima (American shad): 121688887
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Entry
121688887 CDS
T11137
Name
(RefSeq) highly reducing polyketide synthase 40-like
Organism
asad Alosa sapidissima (American shad)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
KAsynt_C_assoc
PS-DH
adh_short
PKS_DH_N
CurL-like_PKS_C
ACP_SdgA_C
PP-binding
Thiolase_N
ADH_N
RhiE-like_linker
GxGYxYP_N_2nd
Motif
Other DBs
NCBI-GeneID:
121688887
NCBI-ProteinID:
XP_041924742
LinkDB
All DBs
Position
17:11119632..11145419
Genome browser
AA seq
2094 aa
AA seq
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MDDIAVVGIGCNFPGGEGLDNLWKVLVEGRNCAVEIPDERFDCSQWYDPDENKPGKTRTK
RAALMNGFNEFDNKFFGITDAEADQMDPQHKLLLQCSYRALEDAGIPMEKASGTRTGVYI
GLMNRDYEIRLSSSSNTITHYFSTGTAMSVAANRISYTFNLTGPSFALDSACSSSLVALH
SACQGIRQGDCDMALCGGVSCIVEPNIFVALSKAKMISPDGTSKPFSNKADGYGRGEGCG
IVLLKPLKRALTDCDHIWGIISKTAVNQDGRTVTPITKPSMAQQEELLSRIYSTESDLTS
VQYIEAHGTGTPVGDPIEAGSISKVIAKARPAGSRQIYMGSVKGNIGHTESAAGVAGLIK
VLLMMKHETIVPSVFYTEDGSSIDAKALNVIIPTQPQKWIAPSTGRAAGINNFGFGGTNA
HVIIKEYNQPINSDREVQKSQNMFVLSAASEKSLTSMIADMAKQLTKETTADIQSLAYTS
ACKRSHVKHKYRKVFRTSSLTDLGIQLKSCLDKKIIPSKSDPRLVFVFCGNGVTYRGMCR
QLLKEEPVFREKIMAIETALRSYKSQSLIEALENDVEELVFSKPDTVQPLLFAVQVAIAS
LLKHWGVKPDAVLGHSVGEVAAAHCSGLLSLEDAVKVIHYRSVLQNKVTGGKMLVVSNMA
VTDVLQYLPSFSGKICLAAHNSPTSCTLSGDAESILALHRMLSKSANSKTLFLHVLDVPA
AYHSHMMDPILSEVESSIGSLEKNEMDAELYSTVSGKIASDHDFCTGSYWSMNIREHVEF
EKALISAANNKNAVFVEIGPRRALYRNIMETLGNDSTVLSSAQPEKDHETMLATFSKLFE
LGFSANWDEFYSGMQVVPTSLPRYQFDCVKKHITLSHAPKNTASGHPVLKQTQITHEFVC
DLSSQELSYLSEHKNNGVSIIPGALYIEIGLAAYMANAKPKAPLNTLQLSINFLSPFLLT
KRQPELKVTLEPAEHETLFKIHSSSTIFASGSIECKREKMVDERNILLDCISNRCTSVIK
SDELYRKLDMGGFQYGGVFKNKGNILWGEEFREAYSLVTVPEELLSQVHEFSIHPVILDY
LMQMTLITGCQGNVVRPSFPSAVGSFIVLEPLQKEMVIYIKATDLADDHFVVCGCLTDRE
GIVLAEVRDLVVKYVGSFSHVLEEYFFHNDVSIISEDVQSTKPQGNALVFSDHNAISLAI
KPYISNGSKYISLKYANTVLKQGPAALFAKVNISDVRKNFTDILFMWGNQDLSTQPVDDV
LTNMANCCEQLRQILLELRKMNYSNSVRVVTYRSSETTVDHISPGFVLSGMTRACAAEIS
EFTFQLIDIGSVSTEDIKALNRVLTSYPCSEYPELVVKDGQILQPEIVNTTMPVTVNQEK
KVCSSQAKAFTLQTADPFRMTSISAVPSDVEVGQIPDKNVEVQLGQICVHSSDYYSVSVS
DHNFGQSIYWNKHTNQNHKLLALDFSGIVTAVGKGVRKLKVGDHIAACYPVMASSKIVLP
DDVCYRTKKLPFLSDLPCVSYYVVVWRIIHSTLPKLKWYGKLGILSSVPDSGLVKALTLI
ANKSGWNAFVATELSGPLQDLNKFDALVLLPPFDKSLLVKACTISGVKNIVVVGDSKVST
IGSQNILREDNDVACIQTIEVSSILAKGSIRANQPQIYKWLRALHLDKIFLALPTITFQR
STTGSIDILPFDEPKSYFSVRTMPMVMLHESKGKHAVSDISLLPREHRLFNKNCVYIVTG
GLTGLGFETVRFIAERGGGYIVILSRRSPSSEMQLAIDAVKQQCGAVIVSLQCDIAIPEQ
VKRAILNIEESLTSCPIKGIFHSAVVLHDAVLGNLDKSLFEKVLKPKVNGALNLHHATKH
CKLDYFVCFSSIASFLGNASQTNYAAANSFLDTFCHYRRRLGLAAQSINWGALNLGLLLN
KDHLQKFLEAQGLMVMHGPEILQSLEQCLMLNKAQQVICKFNLKVMYHHGFSQNPSLSKR
LGTLVLGKLTDAEMSDMPADNKESFSSPNEFIRTILSETLGVEYDELNDEIFLSALGVDS
MLGMTLQNLIFQERGVNIPLVKLLDPNCNISILAAILMEHSQDDIEERNDDTPL
NT seq
6285 nt
NT seq
+upstream
nt +downstream
nt
atggatgacattgctgtggttgggattggatgcaattttccagggggtgaaggccttgac
aacttatggaaggttctggtggaaggtaggaattgcgcagtagagattccagatgagaga
tttgactgttcccagtggtatgatccagatgagaacaaacctggaaagacaaggaccaag
agggctgctctcatgaatgggtttaacgagtttgacaacaagttctttggcatcacggat
gctgaggctgaccagatggatcctcaacacaagttgctgctgcagtgttcctacagagcc
ctggaggatgctgggattcccatggagaaggccagtggcaccagaacaggggtctatata
ggtctcatgaacagggactatgagatccgtttaagtagcagcagcaacacaataacccac
tatttctccacgggtacggctatgagtgtggcagccaacaggatctcctacactttcaat
ctcactgggccttcatttgctctggacagtgcctgctcctcctccttagtagcccttcac
tctgcctgccaaggcatcagacaaggtgactgtgatatggctctgtgtggaggcgtcagc
tgcattgttgagccaaacatttttgttgctctcagcaaagccaagatgatctcacctgat
ggcaccagcaaacctttctccaataaagcagatggatatggcagaggggagggctgtggc
attgtccttttaaaacctctgaaaagggctttaacagactgtgatcacatatggggcatt
atcagcaaaacagctgtgaaccaagatggccgcactgttactccaatcaccaagccatcc
atggctcaacaggaggagcttctcagcagaatctactctacagagagtgacctgaccagt
gtccaatacattgaggctcatgggactggaacaccagtaggtgacccaatagaagcaggg
agcatctcaaaggtcattgccaaagccagaccagcaggatcaaggcagatttatatgggc
tcagttaaaggaaacatagggcacactgaatcagcagcaggggtggcaggactgattaag
gttctcctaatgatgaaacatgaaacaattgtgccctcagtgttctacacagaggatgga
tctagcattgatgctaaagcactcaatgtaatcatacctacccagccacaaaaatggata
gccccaagcactggaagggctgcaggtataaacaactttggttttggggggaccaatgcc
catgttatcatcaaagagtataatcaaccaatcaattcagatagagaggttcagaaatct
cagaacatgtttgtgttatcagcagcatcagaaaaatctcttaccagcatgattgctgat
atggctaaacagctaaccaaggagacaacagctgacatacaaagtcttgcatacacatca
gcgtgtaagagaagtcatgtaaaacacaaatacaggaaggtgttcagaacttcttctttg
acagatttgggaatacaacttaaatcttgtcttgacaaaaagataattccctccaaatca
gatcccagattagtgtttgttttctgtgggaacggtgtgacatacagaggcatgtgcaga
cagctgctcaaagaagagcctgttttcagagaaaagatcatggcaattgaaactgcctta
cgaagctacaaaagtcagagcttgatagaggcacttgagaatgacgttgaggaactcgtt
ttctcaaaacctgatactgttcagcctctcctgtttgctgttcaggttgccattgcttct
ctcctaaagcactggggtgttaaaccagatgctgttcttgggcattctgtaggagaggtt
gctgctgctcattgctctggtctgttgtcacttgaggatgctgtgaaggtcatccattac
cgcagtgtactgcagaacaaggtcactggtgggaagatgctggttgtcagtaacatggct
gtaacagatgtccttcaatacctgccttcattctcagggaagatttgtttggcagcccat
aatagtcctacatcttgcactctatcaggtgatgcagaatccattttggccctgcatcga
atgttaagcaaatcagcaaacagcaagactttgtttcttcatgtcttggatgtccctgct
gcataccacagccacatgatggatccaattctctcagaggtagagagcagcatagggtct
ttggagaaaaatgaaatggatgcagagttgtactcaactgtgtcaggcaaaatagctagc
gatcatgatttctgtactggctcatactggtccatgaacattcgtgaacatgttgaattt
gagaaggcactgatatcagcagctaacaataagaatgcagtgtttgtagagatcggtccc
aggcgagctttgtacagaaacatcatggagacacttgggaatgactctactgtcctgtct
tcagcacagcctgaaaaagatcatgagacaatgcttgccactttcagtaaactgtttgag
ttaggattcagtgcaaactgggatgaattctattctggcatgcaggtcgttccaacttcc
cttccgaggtatcagtttgactgtgttaagaaacacatcaccctttcacatgcaccaaag
aatacagcaagcggccaccctgtccttaaacagacacagataacccatgagtttgtttgt
gatttgtcatcccaagaactctcatatttgtcagaacacaaaaacaatggcgtatccatc
atcccaggggctttatatattgagattggcctggctgcttacatggcgaatgccaaacca
aaggctcctctcaacacactgcaactgagtatcaacttcttgagtccatttctgctgact
aagcgtcaacctgagctgaaggtgacacttgaaccagctgagcatgaaacactatttaag
attcattccagcagcacaatctttgcatcaggaagcatagaatgtaaacgagagaaaatg
gtggacgaaaggaacattttgttagattgcatatctaacagatgcacatctgttatcaaa
tctgatgagttgtacaggaaattagacatgggagggttccaatatggtggtgtcttcaag
aacaagggaaacattctttggggggaggaattcagggaggcatattctcttgtgactgtt
ccagaggagttacttagtcaagtacatgaattttccattcatccagttatcctggattac
ttaatgcaaatgacactcatcacaggttgccaagggaatgtagtcagaccaagttttcct
tcagctgttggtagtttcattgtgctggaacccctccagaaggaaatggtaatatatata
aaagccactgatctggcagatgatcactttgttgtgtgtggctgtctcacagacagagaa
ggaatagttcttgctgaggtgagggatttagtggtcaagtatgttgggagtttttctcat
gttcttgaggagtacttctttcacaatgatgtcagcatcatttcagaggatgtacaatca
acaaagcctcaaggcaatgcattggtcttttctgaccataatgccatttccttggccata
aaaccatatataagtaatggctcaaaatacatctccttaaagtatgcaaatacagtgtta
aaacagggaccggctgcattgtttgctaaggtaaacatctcagatgtgaggaaaaatttc
acagatattttgttcatgtggggcaatcaagacctctccactcagccagttgatgatgtc
ttgacaaacatggcaaattgttgtgaacaattgcgccaaatacttttagaactgaggaaa
atgaattactcaaactctgtcagagtagtgacttatcgatcttcagagaccacagtggac
catatcagtccagggtttgtgctttcaggcatgacaagagcatgtgcagctgaaatatct
gaatttacatttcagctgattgacatcggctctgtctcaactgaggacattaaagccctc
aatcgggtcctgacctcctacccctgcagcgaatacccagagttggtagtgaaagatggt
cagattctccaaccagaaattgtaaacacaacaatgcctgtcacggtaaatcaagagaag
aaggtttgcagttcacaagcaaaggctttcactttacagacagcagaccctttcagaatg
accagtatatctgccgttccctctgatgtggaagttggacaaataccagacaaaaatgtt
gaggttcagcttggtcaaatttgtgtccattcttcagattactattcagttagtgtctct
gaccacaactttggccaatcaatatactggaacaaacacacaaatcagaatcacaagctc
ctggcacttgacttcagtggcattgtgacagctgtggggaaaggtgtgaggaaactaaaa
gttggagaccacattgctgcatgttaccctgtaatggcctcctcaaaaattgtattacca
gacgatgtttgctacagaacaaagaaacttccatttttgagtgacctcccatgtgtttca
tactatgtagtagtctggaggataatccactcaactttacccaaactgaaatggtatggc
aagttgggcatcctctcctctgtccctgactcaggtttggtgaaagctctcactctgatt
gcaaataagtctggatggaatgcctttgttgcaactgagctgagtgggcctctgcaagat
ctgaacaaatttgatgcacttgtcttactgcctccatttgacaaatctctattagtcaaa
gcttgcaccatctctggtgtcaaaaatattgttgttgttggtgacagtaaggtttcaact
attggctcccaaaacattctcagagaagacaatgatgttgcttgcattcagaccattgag
gtctccagcattctggcaaaaggctcaatccgagcaaaccagccacagatttacaaatgg
ctgagggcactgcaccttgacaaaatatttttagctctcccaacaattacatttcagagg
agcacaactggaagcattgacatattgccctttgatgagccaaagtcctacttcagtgtc
agaactatgcccatggtgatgctacatgaaagcaaaggtaagcatgcagtctctgacatt
tcactgctaccaagagaacacaggctcttcaacaagaactgtgtgtacattgtgactgga
ggactcacaggacttggatttgagacagtgaggttcattgctgagagaggtggagggtac
attgtcattctctccaggaggagccccagctctgagatgcaactagcgattgatgccgtg
aagcagcagtgtggggcagtgattgtcagtttgcaatgtgacattgccatccctgaacaa
gtgaaaagggccatccttaacattgaggaaagtctcacctcttgccccataaaggggata
tttcacagcgcagttgtgcttcatgatgctgttttagggaaccttgacaaatccctcttt
gagaaggtcttgaagcccaaagtgaatggagcactgaatctccatcatgccacaaagcac
tgtaagcttgactattttgtgtgcttctcatcaattgcctcatttttaggcaatgcatcc
caaacaaactatgcagctgctaactcatttcttgacaccttctgtcattatagaaggcgt
ctcggacttgcagcgcagtccatcaactggggggccttgaaccttggccttctgttgaac
aaagaccatctgcaaaaatttctagaggcccaaggattgatggtgatgcatggtccagaa
atccttcagagcctagagcagtgtcttatgttgaacaaagctcagcaagtcatttgcaag
ttcaacttaaaagttatgtatcaccatgggttttcacaaaatccctctctttctaaacgg
ttgggcactttagttttaggtaaattgactgatgcagaaatgtctgatatgccggctgat
aacaaagaatcgttctcttccccaaatgagtttatcaggaccatactcagtgagaccttg
ggtgttgagtatgatgagctgaatgatgagatattcctctcagctctgggtgttgactcc
atgttgggcatgaccctgcagaatcttatcttccaggagagaggtgtaaacatccctctt
gtcaaattactggatcctaactgtaatatttcaatcttggcagcaatactaatggaacat
tcacaagatgatatagaagaaaggaatgatgacacaccattatag
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