Alosa sapidissima (American shad): 121688908
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Entry
121688908 CDS
T11137
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3
KO
K04953
cyclic nucleotide gated channel beta 3
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121688908
Ion channels [BR:
asad04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
121688908
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Motif
Pfam:
Ion_trans
cNMP_binding
Zip
Motif
Other DBs
NCBI-GeneID:
121688908
NCBI-ProteinID:
XP_041924756
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Position
17:4757696..4776208
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AA seq
751 aa
AA seq
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MFSKLKSALKGPVPPAPAPAPAPAPAPAPAPAPAPAPEPAKEDKPGEKPNEEKKDEKPAE
SAPVPVAAPAPAPAAAPGEDKPPGEGGEGQEDTPPAPKPIVINRYADDLLRDIVTRMQER
TRIYKEKVMDPYASSPERSPPVTPVYTKEGYKRKLEEDKRRQEEEEQKKKEAEEKKKRDA
EEKKKKDEEEKKKKEEEAQKKKEGEEQQKKDEAEQRKKDGIEDPKPKSSICPKISCSWLV
DPILAPIERRMDKILGTSLDPFTDRRYIAWLSVLTIAFNYNLWFIPARMAFPYHTPEAIP
IWFTFDLIADAIYLIDMIVFQPRLQFVKGGDVIYDQVLTKKYYRESKKFKDALLALAPFD
LLYIPFGFKSVFRANRLLRSETFDEFSDRLEGIMTKAYIWRVIRTIGYLLFILHLNACVY
YVASAYAGIGKSKWVYSGKGSAYLRCYYFAVRTLINIGGLPEPHTVFEISFQMTNFFVGV
FVFSSLIGQMRDVIGAATAGQTYFRNSMDNCVSYMVANNIPKVVQQRVRTWYNYTWDAQG
MLDESELLDKMPLVMKTAIAVDINLATFQKIDLFKGCDNQMLIDMLLRLKSIIYLPGDFV
VKKGDIGKEMYIIKSGAVQVVGGPDNSIIFVTLKAGCVFGEISLLQSSANGGNRRTANVK
AHGFANLFVLEKKDLFDILVHYPESQKVLARKGKQLMKAKGPAAAKAAEDKKKGLTLFGP
KPPTPKFLRAFGTGLNKQGILERMKAAANSS
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagctcaagagtgctttgaaggggcccgtgccccctgccccagccccagcc
ccagccccagccccagcccctgctccggctccggcccccgctccagcccctgaacccgca
aaggaggataagcctggcgagaaacctaatgaagagaagaaagatgagaaaccagcagag
tctgcccctgtcccggtggcagccccagctcctgccccagctgctgcacctggagaagac
aagccacctggggaggggggtgaggggcaggaagacaccccacctgcaccaaagcccata
gtcattaacagatatgcggatgatctgctgcgcgatattgtcacacggatgcaggagcga
acacgcatctacaaggagaaggttatggacccttatgcctcgtcccctgagagaagtcct
ccagtcacaccagtgtacacgaaggagggatacaaacgaaaactggaggaggacaaaagg
aggcaagaggaagaagagcagaagaagaaagaggcggaggaaaagaaaaagagagatgcg
gaggagaagaagaaaaaagacgaggaggagaagaaaaagaaagaagaagaagcacagaaa
aaaaaagagggagaagaacagcaaaagaaagatgaagcagaacagagaaagaaggacggg
atcgaggatcccaaacccaaatcgtccatctgtccaaagatctcatgctcgtggctggtg
gaccctattctggcgcccatcgagaggaggatggacaagatcctcggcacctccctggac
cctttcacagatcgccgctacattgcctggttgagtgtgctgaccatagcctttaattac
aacctttggtttattcccgcacgcatggccttcccttaccatacccctgaggccatcccc
atctggttcacgttcgacctcatcgcggacgccatctacctcatcgacatgatcgttttc
cagccacgcctgcagtttgtgaagggtggggacgtcatatatgaccaagttctaacaaag
aaatactacagggaatccaaaaaatttaaggatgcactgctggcccttgccccttttgac
ctgctctacatcccctttgggttcaagtcggtgtttagagccaaccgcctcctgcggtcc
gagacgttcgatgagttcagtgaccggctggaggggatcatgaccaaagcctacatctgg
agagtcatccgcaccattggctacctgctcttcatcctgcacctcaacgcctgtgtctac
tacgtggcctcagcctatgcgggcatagggaaatccaagtgggtgtacagtggaaagggc
agtgcgtacctacgttgttattattttgcagtgcgaacacttatcaatattggaggacta
cctgagccccacacggtctttgagatctcgtttcagatgacaaactttttcgttggtgtc
tttgtgttctcaagtttaattggacagatgagggatgtcatcggggcggccactgctggt
cagacctacttccgcaactccatggacaactgtgtgtcctatatggtggccaacaacatt
cccaaagtcgtgcagcagagagtgcgcacctggtacaactacacctgggacgcacagggc
atgctggatgagtcagagctgctggacaaaatgcccctagtcatgaaaacagccattgcc
gttgacatcaacctggccaccttccagaagatagacctctttaagggatgtgataaccag
atgcttattgacatgttactgcggctcaagtctattatctacctgccgggagactttgtg
gtgaagaagggagacatcggtaaggagatgtacatcataaaatcaggggctgtgcaggtg
gtaggaggtccagacaactcaatcatcttcgtcacactgaaggcaggctgtgtgtttggg
gagatcagtctgctgcagtcatcagccaatggaggcaaccgcagaaccgcaaacgttaag
gcccatggcttcgccaacctcttcgttctggagaagaaggaccttttcgacatcctagtc
cactacccagagtcccagaaagtgctggccaggaaagggaagcagctgatgaaggcgaaa
ggcccagcggctgccaaggccgccgaggacaagaagaagggcttgactctgttcggcccc
aaaccccccaccccaaagtttcttcgcgccttcggcaccggcctcaacaaacaaggaatc
ctcgagagaatgaaggctgctgctaattcatcataa
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