Alosa sapidissima (American shad): 121688909
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Entry
121688909 CDS
T11137
Symbol
cngb3.1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3
KO
K04953
cyclic nucleotide gated channel beta 3
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121688909 (cngb3.1)
Ion channels [BR:
asad04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
121688909 (cngb3.1)
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF6033
DUF6591
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
121688909
NCBI-ProteinID:
XP_041924758
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Position
17:4777354..4802023
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AA seq
726 aa
AA seq
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MFSKLTKIFRAPVAPTPAEPPAPAPAPAPAPPAKPVEHSCDGQNQRNLEVDFQRSKLNSP
APAPAPAPEPSKPEGAPAAEGEVAEADPEKPRPIVINRYADECLRDVVRRIRERTVIYKE
KVIDPYASSPEHSPPVTPVYRVCDWLKKQEADRIAKEEAEKKKKEDAEKKAAEKKEKEEK
EREKKALEKKEQEEKEALEPKKRPSISKICADFCDKLFAPIEDKMDTYLGNTIDPFTDRR
YLKWLTVVTLVYNYNIWLAPARLCFPYHTPWSIPFWIVFDILSDLINVADIVIFQQRLQF
VKGGDIIKDRVQTKVNYRASPRFRSDMLSIIPFDVLSLQFGFTSLFRFNRFLRIDSFNEF
SDRLESVMTKAYIWRVARTICYLLFLLHLNGCIYYVASDYLGLGSSKWTYDGEGSAYLRC
YYFATRTLINIGGLPEPHSVFEITFQMVNFFVGVFVFSSLIGQMRDVIGAATAGQTYFRA
SMDGCVAYMNTNHIPKVVQQRVRTWYNYTWDAQGMLDEGELLDRMPLVMKTAIAVDINLA
TFQKIDLFKGCDNQMLIDMLLRLKSIIYLPGDFVVKKGDIGKEMYIIKAGAVQVVGGPDN
SIVFVTLKAGCVFGEISLLQSSANGGNRRTANVKAHGFANLFVLEKKDLFDILVHYPESQ
KVLARKGRKLMKAKGPAAAKAEEDKKKAVTLFGPKPPTPKFLRAFGTGKGGFLEKLRAAA
AAEQQK
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaaactcacaaagatttttagggctcccgtggcccccacgccggctgagccc
ccagcaccggcccccgcacctgctcccgctccgccagctaagccagtagagcacagctgt
gatgggcagaaccaacgtaatctggaggttgactttcaaagatcaaaactgaactctcct
gctcctgctcctgctcctgctccagagccatcgaagcctgagggggcccctgccgctgaa
ggagaggtggccgaggcggacccagagaagccacggccaatcgtgataaaccgatatgca
gacgagtgtcttagggatgttgttcgccgcataagagaacgtacagtcatatacaaggaa
aaggtcattgacccctatgcctcttcgccagagcacagtccacctgtcacacctgtatac
cgggtctgcgactggctgaaaaagcaggaagcagacaggattgcgaaagaggaggcagag
aagaagaagaaggaggatgcagagaagaaagcagcagagaaaaaagagaaggaagagaag
gagagagagaaaaaggccctagagaagaaggagcaggaggagaaggaggcgctagagcca
aaaaagaggccttccatatcaaagatctgcgccgacttctgcgataaactatttgcgccc
attgaggacaaaatggacacatatttgggaaatacaatcgacccgtttacagatcgacgc
tatctgaaatggctcactgtggtgacgctcgtctataattacaacatctggttggctccg
gcacgcttgtgttttccataccacactccgtggtcaatacccttctggatcgtatttgat
atcttgtctgacctcattaacgttgccgatattgtaatttttcagcaacggcttcagttc
gtcaaaggtggcgatattattaaagaccgggtgcagactaaagtcaactacagagcatct
ccacgctttaggtcggacatgctgagtatcattccattcgacgtgctcagtctccagttt
ggatttacatctctgttccgattcaatcgctttttgaggatagattcttttaatgagttc
agcgatcgactagagagtgtaatgacgaaagcttacatatggagagtggctcgtactatt
tgctacctgttgttcttacttcatctcaacggctgcatctattacgtggcctcagactac
ctggggttgggatcgtccaagtggacctatgatggcgaaggcagcgcgtatctgcggtgc
tattacttcgccactcggacactgatcaacatcggtggtttgccggagccacattcagta
tttgaaatcactttccaaatggtgaacttctttgtgggtgtgtttgtcttctccagtttg
attggacagatgcgagatgtcattggtgctgccaccgctggtcagacctacttccgcgcc
tccatggatggctgtgtggcctatatgaacaccaaccacattcccaaagtcgtgcagcag
agagtgcgcacctggtacaactacacctgggacgcacagggcatgctggatgaaggggag
ttgttggatcggatgcctttggtcatgaaaacagccattgctgtggatatcaacctggcc
accttccagaagatagacctctttaagggatgtgataaccagatgcttattgacatgtta
ctgcggctcaagtccattatctacctaccgggagactttgtggtgaagaagggagacatc
ggtaaggagatgtacatcattaaagcaggggcagtgcaggtggtaggaggtccagacaac
tctattgtcttcgtaacactgaaagccggctgtgtgtttggggagatcagtctgctgcag
tcatcagcaaatggaggcaaccgcagaactgcaaacgttaaggcccatggcttcgccaac
ctctttgtgctggaaaagaaagatctctttgacatcttggttcactatccagagtcccag
aaagtgctggcaagaaagggcaggaaactgatgaaagccaagggcccagctgcggccaaa
gcagaggaggacaagaagaaggccgtgaccctgttcggacccaagccgcccaccccaaag
ttcctccgggcttttggcacaggaaaagggggttttctggagaaactcagggcagccgcc
gcagccgaacagcagaagtga
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