Alosa sapidissima (American shad): 121688998
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Entry
121688998 CDS
T11137
Symbol
ncam1b
Name
(RefSeq) neural cell adhesion molecule 1b isoform X1
KO
K06491
neural cell adhesion molecule
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
asad04514
Cell adhesion molecule (CAM) interaction
asad04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
121688998 (ncam1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121688998 (ncam1b)
04517 IgSF CAM signaling
121688998 (ncam1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121688998 (ncam1b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asad04515
]
121688998 (ncam1b)
04090 CD molecules [BR:
asad04090
]
121688998 (ncam1b)
00536 Glycosaminoglycan binding proteins [BR:
asad00536
]
121688998 (ncam1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
asad00537
]
121688998 (ncam1b)
04091 Lectins [BR:
asad04091
]
121688998 (ncam1b)
Membrane trafficking [BR:
asad04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
121688998 (ncam1b)
Cell adhesion molecules [BR:
asad04515
]
Immunoglobulin superfamily
NCAM1/2
121688998 (ncam1b)
CD molecules [BR:
asad04090
]
Proteins
121688998 (ncam1b)
Glycosaminoglycan binding proteins [BR:
asad00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
121688998 (ncam1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
asad00537
]
Others
121688998 (ncam1b)
Lectins [BR:
asad04091
]
I-type lectins (Siglecs)
121688998 (ncam1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
Ig_VEGFR-1-like_5th
fn3
V-set
VEGFR1-3_N_Ig-like
FN3_DSCAM-DSCAML_C
Ig_C17orf99
Pur_ac_phosph_N
C2-set_2
Fn3_ROS1
Ig_PDGFR_d4
PSI_induc_2
Motif
Other DBs
NCBI-GeneID:
121688998
NCBI-ProteinID:
XP_041924881
LinkDB
All DBs
Position
17
Genome browser
AA seq
1027 aa
AA seq
DB search
MIWTKDFVLVSLFIVTAGALQVDIMPAQGEISVGEGKFFLCEVVGGSKEIDWFSPSGEKI
EPNRPDITVTRSDEATSTLTIYNAKLDDAGTYKCMARRGNDEGEATVNVKIYQKITFKHV
PTPQEFNEGDDAIIVCDVVSSPPPHIIWKHKGTKIQMEKDVRFKVLTNNHLQIRGIKKTD
EGTYTCEARIMARGEIDLRPIRVVVNVLPTIRIRHVEVNTTGEAGHSAMLACDADGFPEP
IVTWTRSSVLLEEGEKYSFTDDGSEMTIREVRKLDEGEYTCIASNKAGQSEQELSLRVFV
KPKITFLENQTTTEMEEQITLTCDATGDPTPTITWSFGNRVFSEGEQEPPNWIYQASWTR
PEQHKSSDGNVVVRSDARVSSLTLKYAQYTDAGQYVCTARNAIGHDAQAMYLEVRYAPKL
LGSVTVYTWEGNPANISCEILAHPSDVSLYWLRDGIQLPSPNTTNIKIYNTPAATFLEVT
PESQNDFGSYNCTASNEIGTESKEFILVQAEVPSSPSIDVVEPYSSTALVEFQEPESAGG
VPVLKYRAEWRVEGIKDGKWAQRVYDAKEAGVSTITITGLKPETHYEVRMSAINGKGEGE
SSLPTVFKTEPVPEGEPNTPKLKGILQPQGNTFKVTWIKQDDGGSPITHYLVRYKPKKSS
EWKQEMRMPGGSEYALLNGLDWDTDYDVLVVAENIQGKSPPGNLSFRTSAEPAATPDSLG
DGSNLNTGVIVGILIVVFVLLLVAVDITCYFLNRCGLLMCIAVNFCGKSGPGSKGKDIEQ
GKAAYIKDDSNQPIVEMRTEEETTANHDAGGHTEPNETTPLTEPEQQADPAAAALDLPLS
VATNSDTFDTSQNSPTSESTTLTSAPPSESTPAPKPQAPAPPAPAPATPPPSSATPPAKV
RPLVELGGSAPSTPPIAPPRVKSRTSSASGTPPSATKRVAPATPPVQARAPGTNPPAGTE
PPPQEKSATDQPPRDSAAPPDPQSNQKSVSDEKSKLMAEDANVKTAPAPADPPTAPATQA
NSTESRA
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgatttggaccaaggatttcgtcttggtgtcgctttttattgtcactgcaggtgctttg
caggtggacatcatgcctgcccagggagagatcagtgtcggagagggcaaattcttcctc
tgtgaggttgttggaggttccaaggagatcgattggttttctccgtcgggggagaagatc
gagccaaaccgcccggacatcacggtgactcggagcgacgaggccacgtccactctcacc
atctacaacgccaagctggacgacgccggaacctacaagtgcatggctcgccgtggcaac
gacgagggagaggccacggtcaatgtcaagatctaccagaaaatcaccttcaaacatgtg
ccgacgccccaggagtttaatgagggtgatgacgccatcatcgtctgcgatgtggtcagc
tcaccgccacctcacatcatctggaagcacaaaggcaccaagattcagatggagaaggat
gtgcgctttaaggtcctgaccaacaaccaccttcagatccgcggcatcaagaagacggac
gagggcacctacacatgcgaggctcgcatcatggcacgtggagagatcgacctcaggccc
atcagagtcgtcgtcaacgtcctgcccaccatccggatcaggcatgtggaggtgaacacc
actggagaggcgggccattcggccatgctggcctgcgacgctgacggattccccgaaccc
atcgtcacctggaccaggagctccgtgctgctggaagaaggagagaagtacagcttcacc
gatgacggctccgagatgaccatccgagaagtgcgcaagcttgacgagggggagtacaca
tgcatcgcctctaacaaggccggccagagcgagcaggagctcagcctcagggtgtttgtg
aagcccaagatcacgttcctggagaaccagacgaccacggagatggaggagcagatcaca
ctcacctgcgacgccaccggagaccccacccccaccatcacctggagcttcggcaaccgt
gtcttctccgagggagagcaggagcctcctaactggatctatcaggcttcttggactcgg
ccagagcagcataagagctcggatgggaacgtggtggtgcggagtgatgcgcgggtttcc
tcactcacgctgaagtatgcccaatacactgacgccggccagtacgtgtgcaccgcacgc
aacgccatcggacacgacgcacaggccatgtacctggaagtcagatatgcccctaagctc
ctgggttctgtgaccgtgtacacgtgggagggtaaccccgccaacatcagctgtgagatt
ctagctcaccccagtgacgtgtcgctgtactggctacgagacggcattcagctgccctcc
cccaacaccaccaacatcaagatctacaacacacccgccgccaccttcttggaggtgacc
cctgaatctcagaatgactttgggagctacaactgcacagcctccaatgagatcggcaca
gagtccaaagagttcatcctcgtccaggctgaggtgccgtcgtctccatccatcgacgta
gtggagccgtactcgagcacggcgctggtggagttccaggagccagagtctgcgggcggc
gtgcccgttctcaagtaccgcgccgagtggagagtggagggcatcaaggacggcaagtgg
gcacagcgcgtatacgacgccaaagaagcaggcgtgagcactatcactatcactggtctg
aagccagaaacgcactacgaggtccggatgtctgccatcaatggcaagggcgagggggag
agcagtctgcccactgtctttaagacggagcctgtccctgaaggagagcccaacacccct
aagctgaaggggattctgcagccacagggaaacaccttcaaggtcacctggatcaaacag
gacgacggaggctcacccatcacacactacctggtcaggtacaaaccgaagaagtcgtcg
gagtggaagcaggagatgcgcatgcccggtggcagtgagtacgccttgctgaacgggctg
gactgggacaccgactacgacgtgctggtggtggcagagaacatacagggcaaatccccg
ccaggcaacctgtcgttcaggacttcagcagagcccgccgccacgccagattccctgggc
gacgggtcaaacctgaacacgggcgtgatcgtgggcatcctgattgtggtgtttgtgctg
ctgctggttgccgtggacatcacctgctacttcctgaaccgctgtggactgctcatgtgc
atcgcggtcaacttctgcggcaagagcggccctggcagtaagggcaaggacatcgagcag
ggcaaggccgcctacataaaagacgattctaatcagccaatcgtggagatgcggacagag
gaagagaccaccgccaaccacgacgcggggggtcatactgaacctaatgagaccacccct
ctcaccgagccagagcagcaggctgaccctgcggcggctgctctggacctgcccttgtct
gtggccactaactccgacacgtttgacaccagccagaacagccccaccagcgagagcacc
accctcacctccgcacccccctcagaatccacccccgccccgaaaccacaagcacccgct
ccacctgcccctgcccccgccaccccccctcccagcagtgccacccccccggctaaggta
cgccccctggtggagctgggcggcagtgccccgtccaccccccccatcgccccccctaga
gtgaagagcagaacctcctctgcctcaggcacaccccccagcgccacgaaacgggtcgcc
cccgccaccccccctgtccaggcacgcgctcccggcaccaaccctcccgctggcacagag
ccgcccccccaggagaaatcggcgactgaccaacccccccgtgactccgcagccccccct
gaccctcaatccaaccagaagagtgtgtcggacgagaagagcaagcttatggccgaggac
gccaacgtgaagacagcccctgctcccgccgacccccccactgcccccgccacgcaagcc
aacagcaccgagagccgagcatga
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