Alosa sapidissima (American shad): 121689312
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Entry
121689312 CDS
T11137
Name
(RefSeq) LOW QUALITY PROTEIN: dynactin subunit 1-like
KO
K04648
dynactin 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04814
Motor proteins
asad05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121689312
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121689312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121689312
03036 Chromosome and associated proteins [BR:
asad03036
]
121689312
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121689312
Membrane trafficking [BR:
asad04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121689312
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
121689312
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
121689312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Filament
Motif
Other DBs
NCBI-GeneID:
121689312
NCBI-ProteinID:
XP_041924935
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All DBs
Position
18:complement(20748522..20774041)
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AA seq
1263 aa
AA seq
DB search
MSMSRRHSYTPRLSSSVLGSMSSDGGGKPAKVGSRVEVIGKGERGTVAYVGATLFATGKW
VGVILDEARGKNDGTVQGKRYFTCEENHGIFVRQSQIQMLDEGGSSATSPETPDSGIAKL
PKKEGLPLTLELTXLDSRPASASLAGSGTLLGPSQAARRSSTLLENEPATPSQTALGAPV
VPLPFSSSLFLFPPPPLSSSLSPRQEEEALRGQVKDLEEKLETLKLKRQEDKAKLKELEK
HKIQLEQLQEWKSKMQEQQNELQKQLKEAKKEARDALEAKDRYMEEMADTADAIEMATLD
KEMAEERAESLQAEVEGLKEKVDELTMDLEILKHEIEEKGSDGAASSYHVKQLEEQNSRL
KDALVRMRDLSASEKQEHVKLQKQMEKKNTELDTLRTHKDKLVEEMKHAEATIDELKEQV
DAALGAEEMVETLTERNLDLEEKVRELRETVSDLEAINEMNDELQENARETELELREQLD
LAGARVREAHKRVEAAQETVADYQQTINKYRDLTTHLQEVNQELTNQQNATAEQLQQPPA
ELFDFKIKFAETKAYAKAIEMELRKMEVGQANRQVSMLTSFMPDSFLRHGGDHDCILVLL
LIPRLICKAELISKQAQEKFDVSGSSGERVGLRGSPGEQLSFASGLVYSLSLLQATLHKY
EQALSQCSVEVYKRIGTLYSEMSVHERSLDFLIDLLHKDQLDETVQVEPLTKAIKYYQQL
YSIHLTEQPEDCTTQLADHIKFTQSALDCMGVEVGRLRAFLQAGQDKADLSVLLKDLDTS
CGDIRQFCKKIRRRMPGTDAPGIPTALAFPQQVSETLADCRKNLTRVVAVLQEVAASGAQ
MVAPLAEQEGLPAVKLEDEAFKAVEQVYGAHGLNAPECLRQSCSAVIATMNKMATAMQEG
EYDSDKPQRPTPPVEARAAALRAELTDAEGLGLKLEDRETVIKELKKSLKIKGEELSEAS
VRLSLLEKKLDTSTKDADERVEKIQTRLDETLTLLKKKEKEFEETMDALQADIDQLESEK
AELKQRLGNQSRMTIEGLRPPPASGIASIVTGTSTSAVAASMVAGAGALQVVDSPLLRQQ
IDAQRLAIKHLKNDNNRLKAERMHAQLASLPPLTVPKMSGVPKEGVPPDAASGSLYRKTD
LLLSNLLKMSADVRVVDITGKTSVSPSAQLLEQTARLQSLSDALDKLKGEVAEHVVSKQQ
GARVPSDFATFPSSPFVKAKQESKSGTVLVGKVLIPCARGQERSHSLILSQQQLQQVHRL
LMT
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcaaggaggcactcgtacacccctaggctcagcagcagcgtcctcggcagc
atgagttcggacggaggaggcaagccggccaaggtgggctcgcgggtggaggtgattggc
aagggtgagcgcggcacggtggcatatgtgggtgccacgctcttcgccacgggcaagtgg
gtgggcgtcatcctggacgaagccaggggcaagaatgatggcaccgtgcagggcaagcgc
tacttcacctgtgaggagaaccacggcatttttgtgcggcagtcgcagattcaaatgctg
gatgagggtggaagctctgccacctccccagagacccctgactctggcattgccaagctg
cccaagaaagaaggtttaccacttactcttgagttaacttaactagactctcgccctgca
agtgcaagcctagctgggtctggtacactgcttggtccatcccaggctgctcggaggagc
tccactctgttggagaatgagccggccacgccttcccagactgcactgggagctccggtg
gtgcctctccctttctcttcctccctctttctcttcccccccccccccctctcttcatcc
ctctctccccgtcaggaggaggaggccctgcgtggccaggtgaaggacctggaggagaag
ctggagacgctgaagctgaagcgtcaggaggacaaggccaagctgaaggagctggagaag
cacaagatccagctggagcagctgcaggagtggaagagcaagatgcaggagcagcagaac
gagctgcagaagcagctcaaggaggccaagaaggaagcgcgtgatgccctggaggcgaaa
gaccgctacatggaggagatggcggacacggcagacgccatcgagatggccacgctggac
aaggagatggccgaggagagggccgagtccctgcaggcggaggtggagggcctcaaggag
aaggtggacgagctcaccatggacctggagatcctcaagcacgagatcgaggagaaaggc
tcggacggtgctgcgtccagttaccatgtcaagcaactggaggagcagaacagccggctg
aaggacgctctggttaggatgcgagacctgtctgcctctgagaagcaggagcacgtgaag
ctgcagaagcagatggagaagaagaacactgagctggacactctgcgcacacacaaggac
aagctggtggaggagatgaagcatgccgaggctactatagatgagctgaaggaacaggtg
gatgcagcgctgggagcagaggagatggtggagaccctgactgagaggaatttggacctt
gaggagaaggtcagagagctgagggagaccgtcagtgacctggaggccattaacgagatg
aacgacgagctgcaggagaacgctcgcgagacggagctggagctgcgggagcagctggac
ctggccggtgcccgcgtccgcgaggcccacaagagggtggaggccgcccaggagaccgtc
gccgactaccagcagaccatcaacaagtaccgcgacctcaccacgcacctgcaggaagtg
aatcaggagctgaccaatcagcagaacgccacagcagagcagctccagcagcctcctgct
gagctctttgacttcaagatcaagttcgccgagaccaaagcctacgccaaggccatcgag
atggagctgcggaagatggaggtgggccaggccaacaggcaggtgtccatgttgacctcc
ttcatgcccgactccttcctgcgtcacggcggcgaccacgactgcatcctggtgctgctg
ctcatcccacgcctcatctgcaaggcggagctgatcagtaagcaggcgcaggagaagttt
gatgtgagtgggagcagtggagagcgtgtgggcctcaggggctcccctggagagcagctc
agcttcgcctcgggcctggtctactccctcagtctgctgcaggccacgctgcacaaatac
gaacaggctttgagtcagtgcagcgtggaggtgtataagcgcattgggactctgtactct
gagatgagcgtacacgagcgctcgctggacttcctcatcgacctgctgcacaaggatcag
ctggacgagaccgtgcaggtcgagcccctcacaaaggccattaaatactaccagcaactg
tacagcatccacttgactgagcagccagaggactgcaccacccagctggctgatcacatc
aagtttacccagagtgcactggactgcatgggagtggaggtgggccggctgcgcgcgttc
ctgcaggcaggccaggacaaggcagatctgagcgtcctgctgaaggacctggacacgtcc
tgcggcgacatccgccagttctgcaagaagatccgccggaggatgcccggcacagacgcg
cccgggatacccaccgcactggccttccctcagcaggtgtcagagacgctggctgactgc
aggaagaacctgactcgggttgtggccgtgctgcaggaggtagcggcgtctggtgcccag
atggtggcgccactcgctgagcaggagggcctgcctgcggtcaaactggaggatgaagcc
ttcaaagccgttgagcaggtgtatggtgcccatggcttgaatgcccctgagtgcttgcgc
cagtcttgcagcgcagtcatcgccaccatgaacaagatggccaccgccatgcaggaggga
gagtacgactccgataagccccaacgccctactcccccagtggaggcccgcgctgctgca
ctcagggcagaactgaccgacgcagagggcctgggcctcaagctggaggaccgagagacc
gtcattaaggagctcaagaagagcctcaagatcaagggtgaggagttgagtgaggccagt
gtgcgcctgagtctgctggagaagaagctggacacgtccactaaagacgcagacgaacga
gtggagaagatccagacacgtctggatgagaccctcactctgctcaagaagaaggagaag
gagtttgaggagacaatggacgcccttcaggctgacatcgaccagctggagtccgagaag
gcagagttgaagcagcgccttggcaaccagtcacgcatgaccatcgaggggcttcgccca
ccccccgcttccggcatcgcttccatcgtcacgggaacctcaaccagcgccgtagcggcc
agtatggtggctggcgcaggagccctgcaggtggtggacagtccactcctcaggcaacag
atcgacgcccagaggctcgccatcaaacacctcaagaacgacaacaaccgcctcaaggcg
gagaggatgcacgcccagttggcctcgctgccccctctgaccgtcccaaagatgtcaggg
gtgcccaaggagggcgtgcccccggatgcagcctccggctccctctaccgcaagaccgac
ttgcttctcagcaacctgctaaagatgagcgccgatgtcagggtggtggacatcaccggc
aaaacctcagtcagtcccagtgcccagttgctggaacagacggctcggctgcagtcccta
agcgacgctctggacaaactcaagggtgaggtggcggagcatgtcgtatccaagcaacaa
ggggctcgggtgccctccgactttgccaccttcccctcttctcctttcgttaaggcgaag
caggagagtaagagtggcacggtgctggtggggaaggtgttgatcccgtgcgcccgcggt
caggaacgctcccacagtctcatcctatcacagcagcagctgcagcaagtgcaccgcctc
ctcatgacctaa
DBGET
integrated database retrieval system
