Alosa sapidissima (American shad): 121689619
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Entry
121689619 CDS
T11137
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C
KO
K20163
DENN domain-containing protein 4
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121689619 (dennd4c)
Membrane trafficking [BR:
asad04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121689619 (dennd4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
PPR
DUF2464
PPR_long
CA109-like
Motif
Other DBs
NCBI-GeneID:
121689619
NCBI-ProteinID:
XP_041925509
LinkDB
All DBs
Position
18:26349324..26424679
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AA seq
1979 aa
AA seq
DB search
MIEDKGHRVSDYFVVAGLTDRSAPLEQDLSEAKAGGPKAPICELAVINRSAGETVPEGFT
CIEVTPGGQPANLNHGSLKSPELFLCYKRGRSKPPLIDIGVLYEGKERLIQGCEIIQATP
FGRCANVNNSSATSQRIFITFRRDRPVQPQNSLSVTDICVIITSKGETPPHTFCKVDKNL
NCGMWGSSVFLCYKKSVSASNSIAYNAGLIFRYPEDDYESFPLSESVPLFCLPMGAKIEC
WAPNTPYPLPVFSTFVLTISSGEKVYGAAIQFYEAYPLERLSDRQKQQLGLVTAVEKKLI
TNRPVNTNKCICLLSRWPFFEAFRKFLLFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSPHDTLILSQPVCTPLPLSGADYRTLLMNLGAENCAIVLHFVLMESKILLHS
LRPAVLTGIAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYQSDEKRHLNWKNLPKKPCKNLLSSLCNLQNQLALVRRTAPEGSALDM
TPIEADFTWQKKMASLEMEIQESFLRFMATILKGYRSYLKPITQAPSDKATSADSLYDLQ
GFLKSRDRAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCIEKVSMPHTLTGTH
ALTHTRTHPSLSLSLSLSLSLSLPISPCLSLSYETFPALCLDLFDRPPELRPALSSRAAG
ASLSNSPALLAKRTKQEIKLAVKMARRHYSNPPLWARCLISHCYSMWFICLPASVRSAHS
KTHAMQQAFNVLLKLRTSEVEMLDEVCYRVVMQLCGLWGMPVMAVRVHMEMKKAGVQPNA
ITYGYYNKAVLESTWPSQNRSGLFMWTKVRNVVQGVAQFKQAMKGSSSPEEGALIPSIVS
VDGRGRSAEVDRLSHGSGDSSNEPNGDEHVLFSRGLSTDNHCSNTGGQSDQGYGSKDELH
QEVNSSVLPAPIQPINGPTHTGGDIAGSVDSAVAVTTPPSPADVAPPSIVKLSTGSFDGT
TAREISSGGASKLFKPRRKSEDIILPEDDVCLPAVVVTTDGASGPGSGPSDASGTGASSS
SSVSGATRAKAFAERSCSFSTESRAGMLSKKGSLELSMAAHMGADARILAHALTGVKTPT
STPPAYTHTPGGTATPTPGGGSACFAFPEQEGEEEEEPEEEEASADTPTPREEQEKEKEA
DKEEAEPDEMDGGEQAASEVTTPCMARSISTISSASTRVAERLDVEAGSDPLSLLASESE
DAASLQSQESQTGVPSTPKRQLAHEIELYMSLGSKASSTELVQTSQAAPDAPDADAEVSQ
QPLLHPSPPSSYSSGKQSLERRSSLPAAPPPRPPPPGSTGSTPKRSPAAVTRSKTFAVKS
RTMGQPQSPARSLASPSVSLSALVRSSQSASLGSVMNSISAIKMDSLLSGPKMDVLKSGM
KQAATVASKVWGAVASAYNYSDDEDEQGQQRDGFPARLDDQFLAEEGPGAEGHTPRGLIP
SLASNGLTHSSTSLGSSSGSSDTHHNTPMTPGRSMRGGDSEHSSSHHASSSSIYQNCSLE
VLMSSCSQCVKCECLVYDEQIMAGWTADDSNLNTTCPFCQSSFLPLLHVEFHDLRPPSGF
YLKPSESGDSLQGTQPITISEQKVGSTPNPSNSSDLMSFPESTEEGDEDEETASSRTAAQ
KTLVLEPAQSDPLGIVEKRGTSLTRSNSVGGPLQSLNASQRPNHGISTTSLPNSLHDVAD
SLGQKRPNPKPVSVPYLSPLVLRKELESLLENEGDQVIYTHKFLSQHPILFWNLLWYFRR
LDLQSNLPGLILTSEHCNNGVQLPQSSLSADSKQVYIQLLWDNTNLHQEPTEPLYMLWRS
FMERKGTLDPTDHQETRTLLNSIVRSIQTNDVYSPINLLLREVKRHPEVKRQRSIYREIL
FLSLVSLGRENIDVEAFDREYRQAFDELSAEQQKALSPMDRPPNKSVQWCLKTFGAPFI
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggacaagggccaccgcgtgagcgactactttgtggtggcgggcctgacagac
cggtccgcgcccctggagcaggacctgtctgaggccaaggctggcgggcccaaggcgccc
atctgcgagcttgctgtcatcaaccgctcggcaggcgagacggtgcctgagggcttcacc
tgcatcgaggtcacgcctggcggacagcccgccaacctcaaccacggcagcctcaagagc
cccgagctcttcctctgctataagaggggccgcagcaagcccccgctcatcgacatcggc
gtcctgtatgagggtaaggagcgcctgatccagggctgcgagatcatccaggcgacgccg
ttcggccgctgcgctaacgtgaacaacagctcggccacgtcacagcgcatcttcatcacg
ttccgccgcgaccggccagtccagccgcagaactcgctgtccgtcaccgacatctgcgtc
atcatcaccagcaagggcgagacgccgccacacaccttctgcaaggtggacaagaacctc
aactgcggcatgtggggatccagtgtttttctttgctacaagaagtcagtgtctgcctcc
aactccatcgcttacaatgccggcctgatctttcgctacccggaggacgactacgagtcg
ttcccgctgtccgagtccgtgcccctcttctgcctgcccatgggcgccaagatcgagtgc
tgggcgcccaacacgccatacccactgcccgtcttctccaccttcgttctcaccatctcg
tccggcgaaaaggtgtacggcgctgcgatccagttctacgaggcgtacccactggagcgg
ctgagtgaccgccagaagcagcagcttggtctggtgaccgccgtggagaagaagctcatc
accaaccggccggtcaacaccaacaagtgcatctgcctgctgtcccgctggcctttcttc
gaggccttccggaagtttctactcttcctctacaagctctccgtgtccggcccgcacccc
ctgcccatcgagaagcacatctcccacttcatgcacaacgtgtccttcccctcccctcag
agaccccggatactggtccagctttctccacatgacaccttaatcctgtctcagcctgtg
tgcactcctctgcctctgagtggggcggactaccggacgctgttgatgaatctgggggct
gagaactgcgccatcgtgctgcactttgtgctcatggagagcaagatcctgctgcactcc
ctcaggcctgccgtgctcacagggatcgcagaggccgtcgtagccatgatcttcccgttc
cagtggcagtgcccgtacatccccctgtgtcctctctccctggcgggcgtcctgaacgcc
ccctgtcccttcatcgtaggcgtggactcccgctactttgacctctacgaccctcccccg
gacgtggtgtgtgtggacctggacaccaacaccatctatcagtcggacgaaaaaagacac
ttgaactggaagaatctcccaaagaagccgtgcaagaacctcctcagctccctctgcaac
ctgcagaaccagctggcacttgtgcgtcgcacggctcctgagggctcggccttggacatg
acccccatcgaggcggacttcacctggcagaagaagatggcgtctctggagatggagatc
caggagtccttcctccgcttcatggccaccatcctcaagggctaccgcagctacctcaag
cccatcacccaggccccgtctgacaaggccacgtcagccgactccctctacgacctgcag
gggttcctgaagagtcgtgaccgtgcccaccagaagttctactctcagctgaccaagact
cagatcttcatccgcttcatcgaggagtgcaccttcgtcagcgacaaggacactggcctc
gccttcttcgatgattgcatcgagaaagtgagcatgccacacacgctcacaggcacacac
gctctcacacacacacgcacacacccctctctctctctctctctctctctctctctctct
ctctctctccccatctctccctgtctctctcttagttatgagacgttccctgccctgtgt
ctggacctgtttgaccgccctcctgagctgcgtccagctctcagcagtcgagccgcgggg
gccagtctgtccaatagccccgccctgctggccaagaggaccaaacaggagatcaaactg
gcggtgaagatggcgaggcgtcactatagcaaccccccgctgtgggcgcgctgtctgatc
agccactgctacagcatgtggttcatctgcctgcccgccagcgttcgctccgcccactcc
aagacccacgccatgcagcaggccttcaacgtgctgctcaaactcaggacctccgaggtg
gagatgctggacgaggtgtgctaccgtgtggtcatgcagctgtgtggtctgtggggaatg
cccgtcatggccgtcagagtgcacatggagatgaaaaaggctggtgtccaacccaacgcc
atcacctacggatattataacaaggcggttctggagagcacctggcccagtcagaaccgc
agtggtctgttcatgtggaccaaagtgcgcaacgtggtccaaggagtggctcagttcaag
caggccatgaaggggtcctccagccctgaagagggcgctctcatcccctcgattgtgtca
gtggacggcagggggcgctctgctgaggtggacagactgagtcatggcagtggcgacagc
tccaacgagcccaatggagacgagcatgtactcttctcacgcggactctccacagacaac
cactgcagcaacacagggggtcagtcagatcagggttacggctccaaagacgagctccac
caggaggtgaactcctctgtactgccagctcccatccagccaatcaatggccccacacac
actggtggggacatagctggttccgtggacagtgcggttgccgtgacaacaccacccagt
ccagcggacgtggcgccccctagcatcgtcaagctctccaccgggagcttcgacggcacc
acggcccgcgagatcagcagcggaggtgcaagcaagcttttcaagccacgccgcaaaagc
gaggacatcatcctgcccgaggacgacgtttgcctccctgccgtcgtcgtgacgacggac
ggcgcatccggcccaggcagcggtcccagcgatgcgtccggcaccggcgcgagcagcagc
agcagcgtttccggggcgacgcgtgcgaaggcgtttgcggagcgcagctgcagcttcagc
acggagagccgggcgggcatgctgagcaagaagggcagtctggagctcagcatggccgcc
cacatgggcgccgacgcccgcatcctcgcccacgcgctgaccggcgtcaagacgccgacg
tcaacgccgcccgcatacacacacacgcccggcgggacggccacgcccacaccaggcgga
gggtcggcgtgcttcgctttcccagagcaggagggagaggaagaggaggagcctgaggag
gaagaggcatcggcagacacgcccacacccagagaggagcaggaaaaggagaaggaggct
gacaaggaggaggcggagcctgatgagatggacggcggagagcaggccgcctcagaggtc
acgaccccgtgcatggcacggagcatcagcacgatctcgtcggcgtcgacgcgcgtggcc
gagcgcctggacgtggaggccggctcggaccctctgtccctgctggcgtcggagagcgag
gacgcggcgtcgctgcagagccaggagtctcagacgggggtgccctccacgcccaagcgg
cagctggcccacgagatcgagctctacatgagcctggggtccaaagcgtccagcacggag
ctcgtccagacctcccaggccgccccggacgcgccggacgccgacgccgaggtatcccag
cagcctctgcttcacccttcgcccccgtcctcctactcctcggggaagcagtcgctggag
cgtcggtccagccttccggccgcgccccctccgagaccgccgccgccgggcagtaccggg
agcacgccgaagcgcagtccggcggccgtgacgcgctccaagacgttcgcggtcaagtcg
cggacgatgggtcagccgcagagcccggcgcgctcgctcgcctcgccgtcggtgtcgctg
tccgcactcgtgcggtcctcgcagagcgcctcgctcggctcggtcatgaactccatctcg
gccatcaagatggactcactgctctcgggacccaagatggacgtcctcaagtccggcatg
aagcaggccgccaccgtggccagcaaggtgtggggagcagtggcctcggcgtacaactac
tccgacgacgaggatgaacagggccagcaacgtgacggtttcccggcccgtctggacgac
cagttcctggcagaggaggggccaggagcagaaggccacacccccagggggttgatcccc
agcctggcgtccaatgggctcacacacagctctaccagcctaggaagcagcagtgggagc
agcgacacacaccacaacacgcccatgactccaggacgctcgatgagaggcggagactca
gagcacagctcctcccatcatgccagctcctccagcatctaccagaactgctccttagag
gtattgatgtccagctgttcccagtgtgtgaagtgtgagtgtctggtgtacgacgagcag
atcatggcgggctggacagccgacgactccaacctcaacaccacctgccccttctgccag
agctccttcctaccactgctccacgtggagttccacgacctacgcccacccagcggcttc
tacctgaagccaagtgagtctggcgacagcctccaaggcactcagccaatcaccatctcc
gaacagaaggtcggctccacccccaaccccagcaactccagtgacctcatgagcttccca
gaatccaccgaggaaggagatgaggacgaggagaccgccagcagtcgaactgccgcacag
aagacgttggttctggagccggcgcagtcggaccctctgggcattgtggagaagcgtggc
acctctctgacccggagcaacagcgttggcggacccctgcagagcctgaatgccagccag
cggcccaatcacggcatctccaccaccagcctgcccaatagcctgcatgatgtggcggat
tccttggggcagaagcgtcccaatccgaagccagtgtcggttccgtacctgagtcctctg
gtgctgaggaaggagctggagtctctgctggagaatgagggggaccaggtgatctacact
cacaagttcctgagtcagcaccccatcctgttctggaaccttctgtggtatttccgccgt
ctggacctgcagagcaacctgcccggactcatcctcacgtccgagcactgcaacaacgga
gtacagctgccccagtcgtccctgtctgcggacagtaagcaggtgtacatccaactactg
tgggacaacaccaacctgcaccaggagcccacagaaccactctacatgctgtggaggagt
ttcatggagaggaaagggaccctggatcccactgaccatcaggagacgcgcacgctgctg
aacagcatagtccggagcatccagaccaacgatgtgtactcccccattaacctgctgctc
cgagaggtcaaacgacacccagaggtcaagaggcagaggagtatctacagagagatcctg
ttcctatccctggtgtctctgggcagagagaacattgacgtggaggcatttgatcgcgag
taccggcaggcgtttgatgagttgagtgcggagcagcagaaggccctgtcccccatggac
cgcccacccaacaagagtgtgcagtggtgcctcaagacgttcggcgctcccttcatctga
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