Alosa sapidissima (American shad): 121689631
Help
Entry
121689631 CDS
T11137
Symbol
trip6
Name
(RefSeq) thyroid receptor-interacting protein 6
KO
K12792
thyroid receptor-interacting protein 6
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121689631 (trip6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
DUF7128
DUF7576
TFIIA
Motif
Other DBs
NCBI-GeneID:
121689631
NCBI-ProteinID:
XP_041925538
LinkDB
All DBs
Position
18:14264816..14278790
Genome browser
AA seq
619 aa
AA seq
DB search
MSGPTWLPPRTLGSPERATPPMSHAGQSFYRAQMKVLADQRPKYGAYEQNGVTGGGGGGP
TRYIATGPTGGIMQHPEDPGSVAFRPLSPKSGDHYYPPSHGPNDERNTWNPHMAGYDHQG
RGPEKHHSNIDAEIDSLTCMLADLDSHPHSTSTQLYDNVPYNKHLSGDRYKPSGPPGGHP
QGRPSMGYPPHPHPHPQSQYHPAPPYASDHQASSYNSQLDYSYPSPSSTSSSSSSSAAAH
HKPYPQPVPASYTTASTPTGPRFSVQVKTAQPVTTYSQTGRQAEQAYTPPPPPRQHASRP
PAQDHRPPYQDHLPIQAQSQPHQHHQHHQQQQHPQHPQGWYSMPPPQAQEMHGSGGVPPG
VRASQGPQPPKKGPDASGTVPSPAYQPSKGAVPRPEEELDRLTKKLVYDMNHPPTEEYFG
RCARCGDNVLGDGSGCIAMEQVFHVECFTCITCHARLRGQPFYALDKKSYCEGCYISTLE
RCSKCSNPILDRILRAMGKAYHPRCFTCVVCNCCLDGVPFTVDATSQIHCIDDFHRKFAP
RCSVCGQPIMPEPGQEETVRIVALDRSFHVNCYKCEECGLLLSSEGEGRGCYPLDGHILC
KGCSARRIQDLSAKISTDC
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcccaacctggctgcctccgagaaccctaggtagcccagagagagccacgccc
cccatgtcacacgctggacaatcgttttaccgggcccagatgaaggtcttggctgaccag
aggcccaagtacggtgcctatgagcagaatggtgtcacagggggaggtggagggggaccc
accaggtacatcgccactggcccgacaggtggcatcatgcagcaccctgaagaccccggc
tctgtagctttccgcccgttgtctcctaaatctggggaccactactaccccccttcccac
ggacccaatgacgagcgcaacacatggaatcctcatatggcaggctatgaccatcagggg
cgagggccggagaagcaccactccaacatagacgctgagatcgactcactgacctgcatg
ctcgcagacctggacagccacccacacagcacaagcactcagctttatgataatgtgcct
tacaataagcacctctcaggggatcgctacaagccctcgggcccaccagggggtcacccc
cagggccgtccgtccatgggctacccccctcaccctcaccctcacccccagagccagtac
caccccgctcccccatacgccagcgaccaccaggcctcttcgtacaactcccagctggac
tactcctacccttccccttcctccacgtcctcctcctcgtcctcctcggccgccgctcac
cacaagccctacccgcagccggtgcccgcgtcctacaccacggcgtccacgccgaccggc
ccgcgcttcagcgtccaggtcaagacggcccagccggtcaccacctactcacagacgggc
cggcaggccgagcaggcgtacacgccgccaccgccgccgcgccagcacgcctcccgcccc
ccggcgcaggaccaccggccgccttaccaggaccacctgcccatccaggcccagtctcag
ccgcaccaacaccaccagcaccaccagcagcagcagcacccacagcacccgcagggctgg
tactccatgcccccgccgcaggcccaggagatgcacgggtcaggaggagtgccgccagga
gtccgagccagccagggaccccagccgcccaagaagggtcctgatgcctcagggacggta
ccgagtccagcctatcaacctagtaagggggctgtgccaaggcctgaagaagagttggat
cgtctcacaaagaaactggtttatgacatgaaccacccccctaccgaggaatactttggc
cggtgtgcgcggtgtggtgacaacgttcttggagacggaagcgggtgcattgctatggag
caggtgttccatgtggagtgcttcacctgcatcacctgtcacgcccgcctgcggggccag
cccttctacgcactggacaagaagagctactgcgagggctgctacataagcaccctcgag
cgctgctccaagtgttccaaccccattctggaccgcatcctacgggccatggggaaggcc
taccacccgcgctgtttcacctgcgtggtctgcaactgctgcctggacggggtgcccttc
accgtggacgccacctcccagatccactgcatcgacgacttccacaggaagttcgcccca
cgctgctcagtgtgcgggcagccaatcatgcctgagccaggtcaggaggagacggtgagg
atagttgccctggaccgaagttttcatgtcaactgttacaagtgtgaggaatgtggtctg
ctcctgtcctcagagggcgagggccgaggctgctaccccctggacggacacattctgtgt
aagggctgcagtgcccgccgcatccaggacctctccgccaaaatctccaccgactgctga
DBGET
integrated database retrieval system
