Alosa sapidissima (American shad): 121689709
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Entry
121689709 CDS
T11137
Symbol
rab39bb
Name
(RefSeq) RAB39B, member RAS oncogene family b
KO
K07925
Ras-related protein Rab-39B
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121689709 (rab39bb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121689709 (rab39bb)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
asad04031
]
121689709 (rab39bb)
Membrane trafficking [BR:
asad04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
121689709 (rab39bb)
GTP-binding proteins [BR:
asad04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
121689709 (rab39bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
AAA_22
TniB
VGCC_beta4Aa_N
Motif
Other DBs
NCBI-GeneID:
121689709
NCBI-ProteinID:
XP_041925705
LinkDB
All DBs
Position
18:complement(23168027..23174655)
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AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFLL
VGHKCDLEAQRQVSRQEAEKLAAAYGMRYVETSARDAINVERAFTELTRDIFELVKRGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatatggctgtaccagttccgactgattgtcatcggtgactccaccgtgggg
aagtcgtgcttgatccgacgctttaccgaggggcgtttcgcacaggtgtcagatcctacc
gtgggggtggacttcttctctcgactagttgaaatcgaacctggcaaacgcatcaaacta
cagatttgggacactgcgggccaggagcgcttcaggtccattactcgagcgtactaccgc
aactcggtgggtggcctcctgctgttcgacatcaccaaccgccgctcgttccagaacgtt
cacgagtggctggaggaggcgcgtagccacgtgcagccgcacagcatcgtcttcttgctc
gtgggccacaagtgcgacctggaggcccagcggcaggtcagccggcaggaggctgagaag
ctggcggccgcctacggcatgcgttacgtggagacgtcggcgcgcgacgccatcaatgtg
gagagggccttcaccgagctgacgcgcgacatcttcgagctggtcaagcgcggtgacatc
accatccaggagggctgggagggggtgaagagcggcttcgtgccaaacgtcgtgcactcc
tcggaggaagtcaccaaaagtgaccgccggtgcctgtgctga
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