Alosa sapidissima (American shad): 121689763
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Entry
121689763 CDS
T11137
Symbol
eif4a1a
Name
(RefSeq) eukaryotic translation initiation factor 4A1A
KO
K03257
translation initiation factor 4A
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121689763 (eif4a1a)
03012 Translation factors [BR:
asad03012
]
121689763 (eif4a1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asad04147
]
121689763 (eif4a1a)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121689763 (eif4a1a)
mRNA cycle factors
Stress granule specific factors
121689763 (eif4a1a)
Translation factors [BR:
asad03012
]
Eukaryotic type
Initiation factors
eIF-4
121689763 (eif4a1a)
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121689763 (eif4a1a)
Exosomal proteins of bladder cancer cells
121689763 (eif4a1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
121689763
NCBI-ProteinID:
XP_041925802
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All DBs
Position
18:complement(11883610..11890809)
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AA seq
404 aa
AA seq
DB search
MSAEDRPRDNGPEGMEPDGVIESNWKEVVDSFDDMHLHETLLRGIYAYGFEKPSAIQQRA
ILPCIKGYDVIAQAQSGTGKTATFAISILQQIDIELKATQAMVLAPTRELAQQIQKVILA
LGDYMGASCHACIGGTNVRNDVQKLQADVPHIVVGTPGRVFDMLNRRYLSAKYIKQFALD
EADEMLSRGFKDQIYEIFQKLPSDTQVILLSATMPQEVLEVTSKFMREPVRILVKKEELT
LEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIFVNTRRKVDWLTEKMHARDFTVSAL
HGDMEQKERDIIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGR
GGRFGRKGVAINMVTEDDKRALRDIETFYNTTVEEMPMNVADLI
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagaagatagacctagagacaatggccctgaaggcatggagccggatggtgtc
attgagagcaactggaaggaagtggtggacagctttgatgacatgcacttgcacgagact
cttctcaggggaatctatgcctatggttttgagaaaccctctgccattcaacagagggcc
atcctcccttgcatcaagggttacgacgtcattgcacaagctcagtccggcacgggcaag
acggcgacctttgccatttccatcctgcagcagatcgacattgagctgaaggccactcag
gccatggtgctggctcccacccgtgagcttgcacagcagattcagaaagtaatcctggct
cttggggactacatgggggcttcttgccatgcctgtattggaggcaccaacgtgcgcaat
gatgttcagaaacttcaggctgatgtaccccacatcgtagtgggaactcctggtcgtgta
tttgacatgcttaaccgcagatacctctcggccaagtacatcaagcagtttgccctggat
gaagctgatgagatgttgagtcgaggattcaaggaccagatctatgaaattttccagaag
ctgccttctgacacccaggtcatcctgctctcagccaccatgccccaggaggtgctggag
gtgaccagcaagttcatgcgtgaaccagtccgcattctggtcaagaaggaagagctgacc
ctggagggtatccggcagttctacatcaatgtggagaaagaggagtggaagcttgacacc
ctctgtgacctctacgagaccctgaccatcactcaggctgttatctttgtgaacacacgc
cgaaaggtggactggctgactgagaagatgcatgccagggacttcactgtctctgctctg
cacggtgacatggagcagaaggagagagatataatcatgaaggagttccgttctggctcc
agtagagttctgatcactactgatctgctggctcgaggcattgatgtacagcaagtgtct
ctggtcatcaactatgaccttcccaccaatagggagaactacatccacaggattggccga
ggtggccgttttggcaggaagggtgtggccatcaacatggtgaccgaggatgacaagcgc
gctctgcgagacattgaaaccttctacaacaccactgtggaggagatgcccatgaatgtg
gccgacttgatctag
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