Alosa sapidissima (American shad): 121689818 Help Entry 121689818         CDS       T11137                                  Name (RefSeq) collagen alpha-2(VI) chain-like   KO K06238   collagen type VI alpha Organism asad  Alosa sapidissima (American shad) Pathway asad04510   Focal adhesion asad04512   ECM-receptor interaction asad04518   Integrin signaling asad04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:asad00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     121689818    04518 Integrin signaling     121689818  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     121689818   09142 Cell motility    04820 Cytoskeleton in muscle cells     121689818  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:asad04147]     121689818    00536 Glycosaminoglycan binding proteins [BR:asad00536]     121689818 Exosome [BR:asad04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    121689818 Glycosaminoglycan binding proteins [BR:asad00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    121689818  Hyaluronan   Extracellular matrix or blood plasma proteins    121689818 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA Collagen VWA_2 Motif Other DBs NCBI-GeneID:  121689818 NCBI-ProteinID:  XP_041925977 LinkDB All DBs Position 2:11685079..11704814 Genome browser AA seq 1034 aa AA seqDB search MIVCQAVLVLGLFWVRTDAQERGPRPWPLPGEEPDPDPVLPDPSGQCCHQEIMCPINVYF VLDTSESVALLEQPPGSTVNSIKEFTKYFAVRLKDETFTNGVQLSWTMGGLHFSQNNKVF SKITNRDEFLRNVKTVDYFGKGSYIDCALNNMTEAIAQHPFPMKTVNFAVVVTDGYETGH PCGGIKAAAERARDQGNQLFAVAVSQSKLETGLREIASSPVEMFRDNFVAVDLPQTTNVN MQTIERIIMTMKNRAYQECFRPKCVERDGPLGPKGRRGPKGQKGVIGVHGLRGHKGQAGD PGLEGPIGPPGPKGETGPKGDKGDIGDQGGKGVAGLSGRNGTDGQKGKIGRIGAPGCKGD QGDKGIDGYPGDSGDPGPAGPVGVKGDPGHGGRSGPPGPPGDVGPKGERGVPGTQGFPGT KGPQGGPGGIGPKGEQGRTGNTGAKGIQGRVGPKGDKGEPGPEGVRGVPGQGGAKGAKGH PGLGGPRGPPGETGTPGTQGPAGDTGDEGPRGDVGPPGPRGDRGRNGFSYPGSRGRTGDR GEKGRKGPRGSRGDCGAKGDPGTKGENGDPGDPGLVGQPGIRGLSGDAGPPGDPGPEGDP GLSECDVMSYIRETCGCCDCEKQCGALDIVFVIDSSESVGLTNFTLEKHFVINTMNKLGS MATNPNSASGTRVGVVQYSHNGTFEAIRLNDPNINSLSALKKAIKELKWIAGGTWTPSAL KYAYDTIIRDGRREGARVTAVVITDGRYDPKDEPGLLRSLCQDPDVDVMAVGIGDMFNVP VQDETLVSITCDRPQRVRNMTKYTDLVADAFIKEVETVLCPDPVIICPDLPCQTDMAVAP CSDRPVDLVFLVDGSERIGQENFDRVQRFIERVARRLPMARDGSDAMGARVAVMQYGRAN QHQVASGLTHNLGVLTERMEGMRYLDASSDVTSAITHAVSNVLFSERVRQTRREAEVNFV FVTDGVTSTEGLKEVLGVMRKEQVVPSVVALGNEVDKEVVMQLALGDRNAVFEGPDYTHL SELNYFDRFIRWVC NT seq 3105 nt NT seq  +upstreamnt  +downstreamnt atgattgtatgccaggcggtcctggtgttgggcttgttctgggtcagaaccgacgcgcag gaacggggacctcgtccatggcccttaccaggtgaagaaccagacccggaccctgtcctt cctgatccatcgggccagtgctgtcatcaggaaatcatgtgtccgatcaacgtgtacttt gtcctggacacgtccgagtccgtggctctgctggagcagcccccaggcagcactgtgaat agcatcaaggagttcaccaagtactttgccgtgcgtctgaaggacgagaccttcaccaac ggggtccagctctcgtggaccatgggaggcctccacttctcccagaacaacaaggtcttc agcaagatcaccaaccgcgacgaattcctccgcaacgtcaagactgtcgattactttggc aagggctcgtacatcgactgtgccctcaacaacatgacggaggcgatcgcacagcacccg ttcccgatgaagacggtgaacttcgccgtggttgtgacggacggctacgagacgggacac ccgtgcggcggcatcaaggcggcggccgagcgggcgagggaccagggaaaccagctgttc gccgtggccgtgtcgcagagtaaattggagacgggactgcgagagatcgccagctcccca gtggaaatgttccgtgacaactttgtggcggttgacctgcctcagaccacaaatgtgaac atgcaaacaatcgaacggattattatgacaatgaaaaatcgtgcctatcaggagtgtttc aggcccaagtgtgtggaacgggatggccctctcggtccgaaaggtcgcagaggaccaaaa ggacaaaagggggttattggagtgcatggattgagaggtcataagggacaggcgggggat ccaggtcttgagggtcctattgggccgccaggtccaaagggtgaaactggaccaaaagga gacaaaggtgacattggagaccaaggtggaaagggcgttgctggactttcaggtcgcaat ggaacagatggccagaagggcaagatcggtaggattggcgccccagggtgcaaaggagat caaggagataagggaatagacggctatcctggagattctggtgaccctggacctgccgga cctgtgggagtgaagggggaccctggacacggaggcagatcaggccctcctgggccacca ggagatgttggaccaaaaggggagagaggagtgccaggcacacaaggctttccaggaacc aaagggccacaaggaggaccaggaggaattgggccaaagggagaacagggaagaacaggc aatactggagccaaaggcattcaaggaagagttggacccaaaggagataagggggagcct ggccctgaaggcgtgaggggagtgcctggacagggtggggccaaaggagcaaaggggcat ccaggtttgggaggccctagaggaccaccaggggaaacaggaactccaggcacccagggg cccgcaggggacactggagacgagggtcccaggggagatgttggccccccaggaccaagg ggtgaccgtggaagaaacgggttcagttatcctggctcgagaggacgaacaggcgaccgg ggtgagaaaggaagaaagggtccccggggtagcagaggggactgcggggcaaaaggagat cctgggaccaaaggagaaaatggtgatccgggcgatccgggactggtggggcaacctggg atcagaggactgtcgggagatgctggtcctcctggggaccctggcccggagggagaccct ggactgagcgaatgtgatgtcatgagctatatcagagagacgtgtggctgttgtgactgt gagaagcaatgtggcgctctggacattgtgtttgtgattgacagctcagagagcgtgggg ctcacaaacttcaccctggagaaacactttgtcatcaacaccatgaacaagctgggctcc atggcaacgaaccccaactcagcttcagggacacgagtcggagtggtgcagtacagccat aacggaaccttcgaggccatccgtctgaacgacccaaacatcaactcactatctgccctc aagaaggctataaaggagctgaagtggattgccggcgggacatggactccgtccgcactc aaatacgcctacgacaccatcatccgtgatggcagacgagagggggccagggtgactgcg gtggtcatcacagatggccgctacgatcctaaagacgagcccggtctgctccggtccctt tgccaggaccctgatgtagacgtcatggccgtagggatcggggacatgttcaacgtcccg gtgcaggacgagacgttggtcagcatcacctgtgaccggccgcagcgcgtgagaaacatg accaagtacacagacctagtggctgacgcctttatcaaggaggtcgagacggtgctttgc ccagacccagtcattatttgcccagatctgccttgccaaacagatatggccgtggcacct tgttctgaccggcctgtggatctcgtcttcctggtggacggttcggaacgcattggccag gagaacttcgaccgtgtgcagcgcttcatcgagagggtggcacgacgcctcccgatggct cgggacggcagtgacgccatgggagcccgcgtcgcggtcatgcagtacggccgcgccaac cagcaccaggtggcgtccggcctcacacacaacctcggcgtcctcaccgagcgtatggaa ggcatgcgctacctggacgcctcgtccgacgtcacctccgccatcacccacgccgtcagc aacgtgctgttctccgaacgtgttcggcagaccaggcgtgaggccgaggtcaacttcgtc ttcgtcacggacggcgttacatcgacagaggggctcaaggaggttcttggagtcatgcgg aaagagcaggtggtgccctcggttgtcgccttgggcaacgaggtggacaaggaggtggtc atgcagttggcactcggggatcgtaatgcagtgttcgaagggccagactacacacacctg tccgagctgaactatttcgatcggtttatccgctgggtgtgttaa

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