Alosa sapidissima (American shad): 121689913
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Entry
121689913 CDS
T11137
Symbol
cnga1b
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
121689913 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121689913 (cnga1b)
Ion channels [BR:
asad04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
121689913 (cnga1b)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
NPR3
Piezo_TM1-24
Sec62
DUF3043
MDM10
CDC45
PFF1_TM
Mat89Bb
Ndc1_Nup
Zip
DUF5427
Motif
Other DBs
NCBI-GeneID:
121689913
NCBI-ProteinID:
XP_041926081
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Position
18:796646..805075
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AA seq
651 aa
AA seq
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MSTRVTPQVTILVPPPGSALERIEEVSEDSQNITGQPVPTPGLFNVNNNNNNEEEEKEKK
KKEKKEKKEKKEKKKEKKEKKEKKLKEKEEKERKEKEEKEKKEKEEKEKKEKEKKEPPKE
IYVVDPAGNMYYNWLFVITVPVMYNWTIIIARACFEEMQHDYLTSWLILDYVADMVYLAD
MAFRTRTGYLEQGLLVKDEAKLRDRYKKSLQFKLDLISMIPTDIFYLVFGMNYPEIRMNK
LFRVGRMFEFFERTETRTNFPNVFRISNLVMYILIIIHWNACMYYSVSKWIGFGNDGFVY
PDPSDPEFARLVRKYAYSMYWSTLTLTTIGETPPPEKNSEYFFVVTDFLVGVLIFATIVG
NVGSMITNMNQARADFQARIDSIKQYMAFRHVSKDLERRVIKSFDYLWTNKKAVDEREVL
KYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVFSPGDYICKKGDIGR
EMYIIKEGKLAVVADDGIKQFVVLSDGSYFGEISILAIKGSKAGNRRTANIRSIGYSDLF
CLSKDDLMEALTEYPDAKAMLEEKGRQILLKDNLLDLELAAQGPDPKEMEEKVIHMGMSL
EVLQTRYARLLAEHEAAEGKLKKRVSRLERKMAVSAGVVFSTEMVEPEKKD
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaagggtgacgccacaggttacgatcctggtcccgcctccagggagtgccctg
gagcggatagaggaggtttccgaagactcccagaatatcacaggtcaaccagtacccact
ccaggactctttaacgtcaataataacaacaacaatgaagaagaagagaaggagaaaaag
aagaaagagaaaaaggagaagaaagaaaagaaggaaaaaaaaaaagagaaaaaagagaaa
aaggagaagaagctgaaggagaaagaagagaaagagaggaaggaaaaggaggagaaggag
aagaaggagaaagaggagaaggagaagaaggagaaagagaagaaagagccacccaaagag
atctatgtagtggacccagcaggaaacatgtactacaactggctctttgtcattacggtg
cctgtcatgtacaactggacaataataattgccagggcatgttttgaggagatgcagcat
gactacttgacatcctggctcatcttggactatgtggctgatatggtgtacctggcagac
atggcattccgtactcgcacaggttacctagagcaaggcttgctggtgaaagatgaggca
aagctgcgtgaccggtacaaaaagagtctccaattcaagctggacctgatctccatgatc
cccaccgacatcttctacttggtgttcggcatgaactaccccgagatccgcatgaacaag
ctgttccgcgtgggtcgcatgtttgagttctttgagcgcaccgagacgcgcaccaacttc
cccaacgtcttccgcatctccaacctcgtcatgtacatcctcatcatcatccactggaac
gcctgcatgtactactctgtctccaagtggatcggctttgggaacgacggcttcgtctac
ccggacccctccgaccctgagttcgcccggcttgtgcgcaaatatgcctacagcatgtac
tggtccacactgaccctcaccaccatcggcgagacgccccctcctgagaagaactccgag
tacttctttgtcgtcaccgacttcctggtgggcgtgctgattttcgctaccatcgtcggt
aacgtgggctccatgatcaccaacatgaaccaggctagggctgacttccaggcccgcatc
gactccatcaagcaatacatggctttccgccacgtctcgaaagacctggagcggcgtgtg
atcaagtcgttcgactacctgtggaccaacaagaaggctgtggacgagcgcgaggtgctc
aagtacctgcccgacaagctgagagccgagatagccatcaacgtccacctggacacgctc
aagaaggtgcgcatcttcgctgactgtgaggccggcttgctggtggagctggtgctgaag
ctgcagccccaggtgtttagccctggtgattacatctgcaagaagggcgatattggccgt
gagatgtacatcatcaaggaggggaagcttgcggtggtggctgatgacggcatcaaacaa
tttgtcgtgctgagcgacggtagctacttcggcgagatcagcatcttggccatcaagggc
agcaaggcgggcaaccgccggacagccaacattcgcagcattggctactcagacctcttc
tgcctgtccaaggacgacctgatggaggcgctcaccgagtaccccgacgccaaggccatg
ttggaggagaaagggcggcagatcctgctcaaggacaacctgctggacctggagctggct
gcccagggccccgaccccaaggagatggaggagaaggtcattcacatgggcatgagcttg
gaggtgctccagacacgctacgcccgcctgctggctgagcacgaggccgcagagggcaag
ctgaagaagcgcgtctcgcgcctggagaggaagatggccgtcagcgcgggggtggtcttc
tccaccgagatggtggagcccgagaagaaggactag
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