Alosa sapidissima (American shad): 121690029
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Entry
121690029 CDS
T11137
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein isoform X1
KO
K10890
fanconi anemia group C protein
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121690029 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asad03400
]
121690029 (fancc)
DNA repair and recombination proteins [BR:
asad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
121690029 (fancc)
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Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
PAE
Motif
Other DBs
NCBI-GeneID:
121690029
NCBI-ProteinID:
XP_041926274
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Position
18:8042762..8073807
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AA seq
589 aa
AA seq
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MASWEKPEPFSKTLVQFWMAKVSEWSEATSPSAQLDACRHQEKLRGFLQEVLGALRLARC
ASEALENLPFVGQLLGRLCSVPCVTADEESSSLLLQCLWTLFSPTPRSAIELKANDWIRK
TMCHLVAADEEGWSVMKHVGLPSKEYNVSTLKKMMCLLTEAVNGGCSSFRSPTERCLCDG
LHSLSLTCVPLVTRPEAAPLIGALLRRSVTCAHTQLSEEFVEAVCSGFLDKKLHLDVQTV
VALWCHNLSSLERAVLRLVSFVLSGPRIDLQTLDKQVNASLLPQACAQRCSVFLVVNEIF
RCTLLEMEESSVLRLLIQSFTRCFLRALAAQDPEDRLALKSFFPLVPVSLQMPMLTLPSE
VPQDVWLEHLMGISAQLQLASAEAEERGDNTSGSVFEVWFLLLQGGGWVDVAAQLLASAQ
THAASSSSSSSSESKSRALLWLLTFFYHPTNRGHQRIQQWECVQQVWGDLRGVCLSPTPP
PPRALDTVAESLLSRVSSRLALRLLLSLAVFSPVPGDAIALQLIRKMSEKKREEDEKEEE
EEAVSLRREAECLLAAAAEHRLNSDTLASARVQARLRTLEDTLWNALCV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatgggagaagccggagcctttctcgaagaccctggtccagttctggatggcc
aaagtgtctgaatggagtgaggcaacatcaccctcggcccagctagacgcctgtcgacac
caggagaagctgaggggcttcctgcaggaggtcctgggagcgctgcggttggcgagatgt
gcatcggaggcgctggagaacctgccctttgttggccagttactggggaggctctgttcg
gtcccatgtgttacggcggatgaggaaagcagcagccttctcttgcagtgcctgtggact
ctgtttagcccaaccccacggagcgccattgagctcaaggctaacgactggatacggaaa
acaatgtgccatttagttgcagcggacgaagaggggtggtctgttatgaaacatgtagga
ctaccttcaaaagagtacaatgtgagcactctcaaaaagatgatgtgccttctgactgag
gctgtcaacggaggctgcagcagtttcaggagtccaacagagaggtgcctctgtgatggc
cttcacagtctgtcgctgacctgtgtgcctctggtcacacgccctgaagcggctccgctg
attggtgctctcctgcggaggtctgtgacatgtgcacacacccagctaagcgaagagttt
gtggaggcagtttgctccggctttcttgataagaagctgcaccttgatgtccagacagtg
gtggccctctggtgtcacaacctgtccagcctggagagggcggtgttgaggcttgtgtct
tttgttctctcaggcccaagaatagacctgcagactctagacaagcaggtgaacgcttca
ctcctgcctcaggcctgcgcgcagcgttgttcagtgtttctagtcgtgaacgaaatcttc
aggtgcacgttgctggagatggaggagagctctgtcctccgcctgctgatccagtcgttc
acacgctgcttcctcagagcgctggcagcccaggacccagaggacagattggctctgaag
agcttcttccctctggtgcctgtaagcctacaaatgcccatgctcaccctaccgtcagag
gttcctcaggacgtgtggcttgagcacctgatgggcatcagcgcccagctccagcttgcc
agcgcagaggcagaggagcgaggcgacaacacaagtggctctgtgtttgaggtgtggttc
ctgctgctccagggcggaggctgggtggatgtggcggctcagttgctggcctctgctcag
acccacgccgcctcctcttcctcctcctcttcctctgagtccaagagccgggccctgctt
tggctccttacgttcttctaccaccccaccaacagagggcaccagaggatacaacagtgg
gagtgtgtgcagcaggtctggggtgacctgagaggtgtgtgtctgagtccaacgcctcct
cctcctcgtgcgctggacaccgtggccgagtctctcctctcccgcgtctcctccaggctg
gccctgcgtctcctcctcagcctcgccgtcttctcaccggtgccgggcgatgccatcgcc
ttgcagctcattcgaaagatgtctgagaagaagagggaggaggacgaaaaggaggaggag
gaggaggcggtgagtctgagacgggaggcagagtgtctcctggctgccgctgcggagcac
agactaaatagcgacaccttggcgagtgccagggttcaggcgaggttgaggacactcgag
gacaccctctggaatgcattgtgtgtgtga
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