Alosa sapidissima (American shad): 121690323
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Entry
121690323 CDS
T11137
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase delta-like
KO
K06777
receptor-type tyrosine-protein phosphatase delta [EC:
3.1.3.48
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121690323
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asad01009
]
121690323
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asad04515
]
121690323
Enzymes [BR:
asad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121690323
Protein phosphatases and associated proteins [BR:
asad01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121690323
Cell adhesion molecules [BR:
asad04515
]
Immunoglobulin superfamily
Type II RPTP family
121690323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
Interfer-bind
V-set
PTP-SAK
Tc-R-P
DSPc
fn3_2
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Kre9_KNH
Glyco_hydro_46
Motif
Other DBs
NCBI-GeneID:
121690323
NCBI-ProteinID:
XP_041926741
LinkDB
All DBs
Position
18:complement(21704625..21816388)
Genome browser
AA seq
1971 aa
AA seq
DB search
MINGLTCQGHAEAFQHQALAVFEDEMCCYSMMRVTLSINALAVHIQNKPGTPPKFLRTPN
DQTGVQGGVASFICQATGDPRPKIVWNKKGKRVSNQRFEVIEFDDGSGSVLRIQPLRTPR
DEAIYECVASNSVGETSASTRLTVLREDQLPAGFPTIDMGPQLKVVERTRTATMLCAASG
NPDPDITWFKDFLPVNTSSNNGRIKQLRSESFGGTPIRGALQIELSEESDQGKYECVATN
NDGTRYSAPANLYVRELREVRRVPPRFSIPPTDSEIMPGGSVNITCVAVGSPMPYVKWML
GSEDLTPEDDMPIGRNVLELTDVVQSANYTCVAMSTLGVIEAMAQITVKALPKPPGVPVV
TERTATSITLTWDSGNPEPVSYYIIQHKSKNSEDPYKEIDGVATTRYSVGGLSPYSDYEF
RVVAVNNIGRGPSSDAIEAKTAEQAPSTAPRQVRGRMLSGTTAIIHWDEPEEANGQIMGY
RVYYTSEPTHQVNQWEKQIVRASNFLTIQNLTPNKTYYIKVLAYTSVGDGPLSSDLQIIT
KTGVPSQPTDFKAEAKSETSVLLSWVAPSQNGQDNQIMGYELLYRKKDEKEEKRVSFEPT
ATYLLKDLKPFSTYTFQLAARSKHGVGAYTNEISAETPQTQPSAPPQDVKCSSQSSTNIM
VSWRPPPMELQNGIITKYAIQYGATEGEDLATRQISDIPPESTQYLLENLEKWTEYRVTV
TAHTDVGQGPESLPQLIRTEEDVPSGPPRKVEVEPVNSTSIKVMWRSPVSNRQHGQIRGY
QVHYVRMLNGEAMGQPIIKDILIDDAQWEYDDSTEHEMVLVDLLAETTYSVTVAAYTTKG
DGARSKPKLVTTMGAVPERPRLMVSATNMGTALLQWHPPPNTHGTLLGYRLRFGRKDVEP
LTVIEFPERENHYTTKEIHKGASYVFRLSARNKVGFGEETVKEISTSEDVPSGYPQSIAA
EAATATTIQVSWRPVLLAERNGAIARYALQYKDINSPQSPSELFIKAPESTVTLDGLRAD
TTYDIKMCAFTSKGPGPYSPSVQFRTQPVDQAVFAKNFHVKAATKTSVLLTWDIPDNYNA
AQPFTILYDNGQSVEVDGRLTQKLITNLQPETQYSFLLTNRGNSAGGLQHRVTAMTAPDI
LRTKPTLVGKTNSDGMVTVQLPTVQTAEKVRGYYIVVVPLKKRTGKFVRPWDSPDEMNLE
ELLNEINRTSRALRFRRQVESKPYIAAYFKDLPTEFTLGNGQSYGDFENKKLHNGQEYIF
FVLAVLDISENTMYSTSPYSGPCVSADIDPQPIIDEEEGLLWVVGPVLAVVFIICIVIAI
LLYKSKPDRKRAESEARKGSLPHSKELPSHHPTDPVELRRLNFQTPGSGVCGYPSNLHLS
SMANHPPIPILDLADHLERLKANDNLKFSQEYESIDPGQQFTWEHSNLEVNKPKNRYANV
IAYDHSRVLLSAIDGIPGSDYINANYIDGYRKQNAYIATQGSLPETFGDFWRMIWEQRSA
NIVMMTKLEERSRMPSYFFSKVKCDQYWPTRGTETYGLIQVTLLDTVELATYCVRTFALY
KNGSSEKREVRQFQFTAWPDHGVPEHPTPFLAFLRRVKACNPPDAGPMVVHCSAGVGRTG
CFIVIDAMLERIKHEKTVDIYGHVTLMRAQRNYMVQTEDQYVFIHDALLEAVTCGNTEVP
ARNLYTYIQKLTQIETGENVSGMELEFKRLANTKAHTSRFISANLPCNKFKNRLVNIMPY
ESTRVSLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVV
MLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVR
QFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVL
ERMRYEGVVDIFQTVKMLRTQRPAMVQTEDQYQFCYRAGLEYLGSFDHYAT
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atgattaacggactgacatgtcaaggtcatgcagaggcattccagcatcaggctctcgct
gtgtttgaggacgagatgtgttgctacagtatgatgagggtgacgctgtcaataaatgct
ctcgccgtccacatccaaaacaagcccgggacaccgccaaagtttttaagaacccccaat
gaccaaacgggagtccaaggcggcgtggcatcgttcatatgtcaggcgactggggatccc
cggcccaagatcgtatggaacaagaaggggaagagagtgagcaaccagagatttgaggtg
atagagtttgacgatggttcaggctcagttctgagaatccagcctttacgtacgccacgg
gacgaagccatatacgaatgtgtggcctccaacagtgttggagagacgagcgccagcaca
cggctgactgttttacgtgaggaccagctgcccgctgggttccccaccatagacatgggc
cctcagctcaaggtggtggagcggacgcgcaccgccaccatgctctgcgcggccagtggc
aaccccgacccagacatcacctggttcaaggacttcctgccggtcaacacgtccagcaac
aacggacgaatcaaacagctccgctcagaatcctttggtggtacaccaataagaggagcc
ctccagatcgagctgagcgaggagtcggaccaggggaagtacgagtgtgtggccaccaac
aacgatggcacccgctactccgccccggctaacttatacgtcagagagctgcgagaagtg
cgtcgggttccccctcgcttctccatccctccgacggacagcgaaataatgccgggcggc
agcgtcaacatcacgtgcgtggcggtgggctcacccatgccctacgtcaagtggatgctg
ggctccgaggacttgaccccagaggacgacatgcccattggccgcaacgtgctggagctc
actgacgtggtgcagtcggccaactacacctgcgtcgccatgtccacactgggcgtcatc
gaggccatggctcagatcactgtcaaagctctacccaagcctccaggggtccccgtggta
actgaacgcacggcgaccagcatcaccctcacctgggactctggcaacccagagcctgtc
tcctactacatcatccagcacaagtccaagaactctgaggacccttacaaggagattgac
ggcgtggccaccacccgctacagcgtcggcggcctcagcccatactccgactacgagttc
cgcgtggtggcggtcaacaacatcggccgcgggccgtccagcgacgccatcgaggccaag
acggcagagcaggcgcccagcacggcgccacggcaggtccgaggccgcatgcttagcggc
accacggccatcatccattgggacgagcccgaggaggccaacggtcagatcatgggctac
cgggtctactacaccagcgagcccacgcatcaggtcaaccagtgggagaagcagatagtc
cgggcctccaacttcctcaccatccaaaatctgacaccaaacaagacatactacatcaag
gtgctggcctacacgtcagtgggagacggaccactgtcctctgacctacagattatcacc
aagacaggagttccatcccagccgacggacttcaaggcggaggctaagtctgagacaagt
gtcctgctgtcttgggtagcgccctctcagaatggacaggacaatcaaattatgggatat
gagctgctgtacaggaagaaggatgagaaagaagagaagcgggtgagctttgagcccacg
gccacctacctgctgaaggacttgaagcccttcagcacctacacgttccagttagcggca
cgcagcaaacacggcgtgggagcctacaccaatgagatctcagctgagacgccccagaca
caaccctcagctccacctcaggatgtcaagtgctctagccagagttccaccaacattatg
gtaagttggcggccaccccccatggaacttcaaaacggaatcattaccaagtacgccatc
cagtacggcgccacggagggagaagacttggccacaaggcaaatctcggacatccccccg
gaatccacccagtacctcttggaaaacttggaaaaatggacagagtaccgcgtgaccgtg
accgcccacactgacgtagggcagggccccgaaagcttgccccaactcatccgaacagag
gaggatgtgcccagtggcccccctcgcaaagttgaggtggagcccgtcaactccacgtca
ataaaagtgatgtggcgctcaccagtgtccaacaggcagcacgggcagatccgcggatac
caggtgcactatgtcaggatgctaaatggggaggccatgggacagccaattatcaaggac
atcctgatagacgatgctcagtgggaatatgatgattccaccgaacatgagatggtcctt
gttgacctgctggctgagaccacatactccgtcaccgtagctgcctacaccactaagggc
gatggggcccgtagtaagcccaagctggtcaccaccatgggtgcagttcccgagcgcccg
cgccttatggtgagtgccaccaacatgggcacggcccttctccagtggcacccgccgccc
aacacgcatggcaccctcctcggctaccgcctgcgcttcggccgcaaggacgtggagccg
ctgaccgtcatcgagttccccgaacgcgagaaccattacaccaccaaggagatccacaag
ggcgcctcgtacgtcttccgcctgtccgcccgcaacaaggtgggcttcggggaggagacg
gtcaaggagatcagcacgtccgaggacgtgcccagcggctacccgcagtccatcgccgcc
gaggcggccaccgccaccaccatccaggtgagctggcggccagtcctgctggccgagcgc
aacggcgccatcgcgaggtacgcactgcagtacaaggacatcaacagcccgcagagcccg
tccgagctcttcatcaaggcgcccgagtccaccgtcacgctggacggcctgcgcgctgac
actacgtacgatatcaaaatgtgtgccttcaccagcaagggccctggcccgtatagcccc
agtgtccagttcagaacacagcccgtcgatcaagcagtgtttgcaaaaaatttccatgtg
aaagctgccacgaagacctcggtgctgctgacgtgggacattcccgacaactacaacgcc
gctcaaccgttcaccatcctctacgacaatggccagagcgtggaagtggacggccgtctc
acccagaagctgatcaccaacctccagccggagacccagtactccttcctgctgaccaac
cgtggcaacagcgcaggcgggctgcagcaccgcgtgacggccatgacggcgccggacatc
ctgcgcaccaagcccacgctggtgggcaagaccaactccgacggcatggtcaccgtgcag
ctgcccacggtgcagaccgccgagaaagtcaggggctactacatcgtggtggtgccgctg
aagaaacgcacagggaagtttgtgaggccttgggacagcccggatgagatgaacctagag
gagctgctgaatgagatcaaccggacgagccgagcgctccgtttccggcgtcaggttgag
tccaagccgtacatcgccgcctacttcaaggacctgcccacagagttcacactgggcaac
ggccagagctacggagacttcgagaacaagaagctgcacaacggacaggagtacatcttc
tttgtcttagccgtgctggacatctctgaaaacaccatgtactcgaccagcccgtactcg
ggaccctgtgtgtcggcggacatcgatccccagcccatcatcgacgaggaggagggcctg
ctgtgggtcgtgggtcccgtcctcgccgtggtcttcatcatctgcatcgtcatcgccatc
ctgctctataagagcaaaccagacaggaaacgtgccgagtcggaggccaggaaaggaagc
ctgccgcacagcaaggagttgccctcgcaccaccccactgaccccgtggagctgcgccgg
ctcaacttccagacgccaggttcaggcgtgtgcggttatcccagtaacctccatttgtca
agcatggctaatcatcctcccatccccatactggacctggctgaccatctggagagactc
aaagccaacgacaacctcaagttctcccaggagtacgagtccattgatcctggacagcag
ttcacctgggagcactccaacctggaagtgaacaagcccaagaacagatatgccaatgtc
atcgcctacgatcactccagagtcttactctcagcgatcgatggtataccaggcagtgat
tacatcaatgccaactacatcgacggctaccggaagcagaatgcctacatcgccacgcag
gggtcgctcccggagacgttcggagacttctggaggatgatctgggaacagcgcagtgcc
aacatcgtcatgatgaccaagctggaggagaggtccaggatgccttcatatttcttctcc
aaggtgaaatgcgaccagtactggccaaccagagggacggagacctatggccttatccaa
gtaactctgctggacacagtggagctggctacctactgcgtcaggaccttcgccctctat
aagaatggctcgagtgaaaagcgggaggtgcggcagttccagtttacagcctggcctgac
cacggagtgcccgagcaccccacaccgttcctggccttcctgcgcagggtgaaagcctgc
aatcctccagacgctggacccatggtggtacactgcagtgcgggcgttggccgtacgggc
tgcttcatcgtgatcgacgccatgctggagcgcatcaagcacgagaagacggtggacatc
tacgggcacgtgacgctgatgcgtgcccagcgcaactacatggtccagacggaggaccag
tacgtgttcatccacgacgcactgctggaggccgtcacctgcggcaacacggaggtgccc
gcccgcaacctctacacctacatccagaagctcacgcagatcgagacgggcgagaacgtc
tccggcatggagctcgagttcaagcgcttggccaacaccaaagcccacacctcccgattc
atcagtgccaatctgccctgcaacaagttcaagaaccgccttgtcaacatcatgccatac
gagtccacacgagtcagtctgcagcccatccgcggggtggagggctccgactacatcaac
gccagcttcatcgacggatacaggcaacagaaggcctacatcgccacgcaaggccctctg
gccgagaccaccgaggacttctggagaatgctgtgggagcacaactccaccatcgtggtc
atgctgaccaaactccgagagatgggacgggaaaaatgccatcagtattggccagcggag
aggtctgcccgctaccaatactttgtggtggaccctatggccgaatacaacatgcctcag
tacatcctgagggagttcaaagtcaccgacgccagggatggacagtcgcggacggtacgt
cagttccagttcaccgactggcccgaacagggagtgccaaaatcgggagagggcttcatc
gacttcatcggccaagtgcacaaaacgaaagagcagttcggccaagacggacccatctcg
gtccattgtagtgctggcgtgggcaggaccggagtcttcatcactctcagtatagtgttg
gagcggatgaggtacgagggcgtggtggacatcttccagacggtgaagatgctcaggacg
cagagacctgccatggtgcagacagaggatcagtatcagttctgctatcgagcaggcttg
gagtaccttgggagctttgatcactatgcaacgtaa
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integrated database retrieval system
