Alosa sapidissima (American shad): 121690339
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Entry
121690339 CDS
T11137
Symbol
gcnt4a
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4
KO
K09663
beta-1,6-N-acetylglucosaminyltransferase 4 [EC:2.4.1.-]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00512
Mucin type O-glycan biosynthesis
asad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
121690339 (gcnt4a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
asad01003
]
121690339 (gcnt4a)
Glycosyltransferases [BR:
asad01003
]
Glycan extension
O-Glycan
121690339 (gcnt4a)
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Paralog
GFIT
Motif
Pfam:
Branch
DUF7801
Motif
Other DBs
NCBI-GeneID:
121690339
NCBI-ProteinID:
XP_041926763
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Position
18:13485109..13488010
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AA seq
431 aa
AA seq
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MIRRRSVRKKLKKKCLIFSFSILIMCVLKLVHIKVVEKNTFYIEPYGITSVPISAQADKP
DIDCLAIYQLDPVEIGKSLEIRRKVIVDLEDESIIKLTADCPRYNEARGYNEITASVEER
QFPLAYSLVVHKNIPMVERILRAIYAPHNIYCIHYDQKSSKSFIAAVKSLVKCFPNVFIA
SQLESVQYAHVTRLKADLNCLSDLLHSSAQWKYVINLCGQDFPLKSNYELVSELKKLNGA
NMLETSRPSDLKKKRFQFQHELKDMPYEYQKIPVRTTHAKDSPPHGIEMFIGSAYFVLSR
DFVSYATGSQLALDFLAWSADTYSPDEHFWASLVRVPEAPGAIARSQPDVTDLMSKTRLV
KWSYLEGNLYPACTGTHLRSVCIYGAAELRWLLNYGHWFANKFDPKVDPVLIKCLEEKLE
EKRQNWAKLAS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgataagaagaaggtctgtccgaaagaagttgaaaaagaaatgcctcattttttctttc
tccatactaattatgtgtgtactgaagctcgtccacatcaaggtagtagaaaagaatacc
ttttacattgagccttatggaataacttcagtccccataagcgcccaggctgacaagcct
gacattgactgcttggccatatatcagctcgatccagtggaaattggcaaatctttagaa
ataaggcggaaagttatagtggacttggaggatgagagtattatcaagttaacagcagac
tgtccgaggtacaatgaggcaaggggttataatgagataactgcatcggtggaggagagg
cagtttcctcttgcctactccttagttgtacataagaacattccaatggtggagagaatc
ctgcgtgctatctatgcaccccataacatctactgtatccattatgatcagaagtcttcc
aaatccttcatcgctgcagtaaagagtcttgttaagtgctttccaaatgtattcattgct
agtcagttagagtccgtgcagtatgcccatgtgactaggctaaaggcagacctgaactgc
ctgtcagacctactccactcctcggcccagtggaagtacgtcatcaatctatgtggacaa
gatttcccattgaagtctaattatgagcttgtgtcagaattgaagaagcttaacggtgca
aacatgctggagacgagtcggcccagcgacctgaaaaagaagcgtttccagttccagcac
gagctgaaggacatgccttatgagtaccagaagatcccagtcagaaccacgcatgccaaa
gactcccctccccacggcatcgagatgtttatcggcagtgcatactttgtgctgtcccgg
gactttgtgagttacgccactggcagccagctggcactggacttcctggcgtggtcggca
gacacgtactccccggacgagcacttctgggcctcgctggtgagggtgcccgaggcgcca
ggtgccatcgccaggtcgcagcccgacgtgacggatctgatgagcaagacgcggctggtc
aagtggagctacctggaggggaacctgtatccggcatgcaccggcactcatttgcggagc
gtgtgcatctacggggccgccgagctacggtggctcctcaactacggacactggtttgcc
aacaagtttgaccccaaagtggaccccgtcctcatcaaatgtctagaggagaagcttgag
gaaaagcgacagaactgggcaaagttagcgtcttaa
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