KEGG   Alosa sapidissima (American shad): 121690393
Entry
121690393         CDS       T11137                                 
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2 isoform X1
  KO
K24734  NACHT domain- and WD repeat-containing protein
Organism
asad  Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:asad00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:asad04990]
    121690393
Domain-containing proteins not elsewhere classified [BR:asad04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   121690393
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_NWD2_C Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd EIF3I WDR55 WD40_WDHD1_1st Beta-prop_EML_2 WHD_NWD1 Beta-prop_WDR36-Utp21_2nd AAA_16 Beta-prop_WDR90_POC16_2nd Beta-prop_ACSF4 NPHP3_N Beta-prop_TEP1_2nd NACHT AAA_22 WD40_MABP1-WDR62_2nd PQQ_2 Tricorn_2nd Beta-prop_WDR19_1st NPHP3 AAA_28 AAA TniB
Other DBs
NCBI-GeneID: 121690393
NCBI-ProteinID: XP_041926853
LinkDB
Position
18:13878286..13933587
AA seq 1774 aa
MKRMNPRWKASPMWPSGVGSRQPNPRDSALRRAAISGNVLALPPFHVPTGRAVRVFICAN
PDDTEAERNALKEHVYPKLRDFCRENYGVEFQVVDLYWGVDPEEWDSPDLQRLRMKLLED
CLKTSAGPCFVGLVGEKYGSIRVPGEVESAEFEMILDAAVEAGLDTRLLEEWYCRDENAV
PPAYYLKPKAQMLKNYQNSVRDPDTSSYVCFPTCLPSGMESSSAAKSKNDKAWRGVSDEI
KKIFRTAVLQLQEKGTMKSVQAKKFLCSPLEDELDFALGKQTPAFLKKCVCYIRKIANFD
RHAKLPEMARYMDIITDADRVMRNQEAYERLLKVRDEFIPTVVAASNLRVYSSVTHCDMK
LGYSQEVESHYVEGLCKQFYEDMVDIIQATVQQNFDAETDPMYDELLQHLSLCKTFSSIY
EYKSEALDLVQEYLYPVKGSRMSPLVVYGGPCSGKTLLLAEVAKEAYSWLQKEMGPETDP
VVIVRFIGTTDFSTDLRTLLQSICEQIAINYRCLIHFLPQKIQEMRELLVNLLGESSFHR
PLVIVLDALEQLSDADEARKLWWLPAHLPRTVRIVVSTLPNKHGILQKLRSLVHDEFRYV
ELIQRDRKACSQTLKQQLLSVKRKVTSGQQIYVNEALAKCTLPMFVNLIYREVVNWRSHK
DVDDTSLSATVHDSIERLFFSVEDKLGSRFVFRALGYITMSKAGLTEMELEDILSLDNSV
LGDIMVSSNLKNPLRVSYDLIARLREELDGYLIERQVRNVTLMVWANRHLHLIALKLYLS
NEEDVHQMHSLLAEYFLGAWAGGRKKIFHCDNNHFAHFSHHNNPQQQQQQQQHHHHHPSQ
HGHDKGSADKYSYDRQTPEQPWVFQCNLLEPDIFFVNHRKMTELVYHLTRSGRTDDLMYG
VIMNFSWLYTMIKIGHFDKALTDIDLAYSYSQEKELKFLATTLRSIKVKVTRNPASLSAE
LQQRLLPVVTSLPKLRHLLLECDKDGPKYCSIVPLHSSMDVTYSPERLPLCSSYMQIVEI
IPTLAPSIVIVALEDGSVSTWDVESRQLLRQIDTARSVVLGIRLTTDEKYLVVATTKNTL
LIYDNHKSCLLSEVEVKCSKHLGVTGGVAFINGFTLSSQHALAWLEASKEVNVIDLVYGW
PLYQFHCWYEVTCVQCSPDGMYAFCGQYLNTTSIFHLGSGDKLATMTSEFSGGFVKSILV
LDTLNQMVMIDNEGSLSVWNTKEVTNPRLMEDYDCRGDDSEVVGIELSEDQRSILICKAR
SIEVLDTKVWKMVEKFKAKRTERFVAAVLSKNGQSIVASMENTSSIFVWRRDSGQCMASL
IEISGAIVKLIKSTHHNLLLSVASSGVLSVWDIDIITAMSNIDKTGKRILNLQLSGREDF
IYTMDGSESIHKWNFNTGFIEMVFKHEGLVENCVLTTSGDLMVTSDDKSSQYIWQTTTGE
NIFRINGQKITQLLITHNDQFVVSLCEQNASRVWRLATGHKVCNILVTLQHALITTANTF
LVGTTKNKLLAVSLWSGSVSKKFICDDGITIVNFKLIPDCPDYVVFITSTETVFIWSVAD
ESVCRRVQMPANFLKNLEDFQISPNGKLGIVSKGDENINVLDLHSGKLRLVHAAGIIWRQ
KLSRDGRYLVYICFRNCEEDDDAGVVSNLIVMRLADGKSIGTCSLYKTPTFLCLSQRALN
IIVGFEDGSIGTYTVVDRVDAALKIKIATSNSRQIVNNAAQKVRPKCSTHAFKTISDCIW
RESTEVFSRDSPINLSDSGEAETTTPTKKSELLQ
NT seq 5325 nt   +upstreamnt  +downstreamnt
atgaagcggatgaatccacgctggaaagcgtcccccatgtggccgtcaggagtggggagc
aggcaacccaatcctcgggattccgcgctccgcagggcggccatcagtggcaacgtcctt
gcgctcccacctttccacgtccccactggcagggctgtccgggtcttcatatgcgccaat
cccgatgacacggaagcggagcggaacgcgctgaaggaacatgtctaccccaagctgcgc
gacttctgccgggagaactatggcgtcgagttccaggtggtggatctgtattggggagtg
gaccctgaggagtgggacagccctgacctgcaacgtctacggatgaagcttctagaagac
tgcctgaagacctcggcagggccatgctttgttggtctggtgggggagaagtacggcagc
atccgcgtgccgggggaggtggagtcggccgagttcgagatgatcctggacgcggcggtg
gaggcgggcctggacacgcgtctcctggaggagtggtactgccgcgacgagaatgccgtg
ccgcccgcctactacctcaagcccaaagcccagatgctgaagaactaccagaactcagta
cgggacccagacacttcctcttacgtctgtttccccacctgtctgccctctgggatggag
tcgagcagcgcggccaagtccaagaacgacaaggcgtggcgcggcgtctcagacgagatc
aagaagatcttccgcacggctgtgctgcagctgcaggagaagggcaccatgaagagcgtc
caggccaagaagttcctctgctcacccctggaagacgagctggacttcgcactgggcaag
cagacgccggccttcctgaagaagtgtgtgtgctacatccgcaagatcgccaacttcgac
cggcacgctaagctgcctgagatggcccgctacatggacatcatcaccgacgccgaccgc
gtcatgcgtaaccaggaggcatacgagcggctgctcaaagtccgtgacgagttcattccc
acggtggtggcggcgtccaacctgcgcgtctactcttccgtcacacactgtgacatgaag
ctgggctactcacaagaggtggagagccactatgtggagggtttgtgcaagcagttctac
gaggacatggtggacatcatccaggccacggtgcagcagaacttcgacgctgagacggac
ccgatgtacgacgagctcctgcagcacctgtcgctctgcaagaccttctcgtccatctac
gagtacaagagcgaggcgctggacctggtgcaggagtacctctacccggtgaagggcagc
cgcatgagccccctggtggtgtatggggggccctgcagcggcaagacgctgctgctcgcc
gaagtggccaaggaggcatactcatggctgcagaaggagatgggtccagagacggacccg
gtggtcatcgttcgcttcatcggcaccaccgacttctccacggacctccgcaccctgctg
cagagtatctgcgagcagatcgccatcaactaccgttgcttgatccacttcctgccccag
aagatccaggagatgagggagctgctggtcaacctgctgggcgagtcgtccttccaccgg
ccacttgtcattgtcttggatgctttggagcagctctcggacgctgacgaggctcggaag
ttatggtggctgcccgcacacttgccccgcactgttcggatcgtagtgtccaccttgccc
aacaagcacggcattctccagaagctccgcagcctcgttcacgacgagttccggtatgtg
gagttaatccagcgtgatcgcaaagcctgcagccagacactcaagcagcagctcctcagt
gtcaagaggaaggtcacttcaggccagcaaatctacgtcaatgaggcgctggccaaatgc
acattgcccatgttcgtcaatctcatctaccgggaggtggtaaactggaggtcacacaaa
gacgtagacgacacatcgctaagtgccacagtgcacgacagcatcgagcggctcttcttt
tccgtggaggacaagcttggctctcgatttgtcttccgggcactgggctacatcaccatg
tccaaagctgggctgaccgagatggagctcgaagatatcctctccttggacaacagcgtc
ctgggggacatcatggtaagctccaacctcaagaacccactcagggtctcctatgacctc
attgcccgactgagggaggaactcgacggctacctgatcgaacggcaggtgcgcaatgtg
acgctaatggtgtgggccaacaggcacctgcacctgatcgcgctgaagctgtacctcagc
aacgaggaggacgtccaccagatgcacagcttgttggcggagtatttcctgggggcctgg
gccggaggccggaagaagattttccactgcgacaacaatcacttcgcccacttctcccat
cacaataacccacagcagcagcagcagcagcagcagcaccatcaccaccacccatcacag
cacggtcacgacaaaggcagtgccgacaagtactcttacgatcggcagactcccgagcag
ccctgggttttccagtgcaacctcttggagccagacatcttctttgtcaaccacaggaag
atgacagagttagtgtatcacttgactcgaagtgggcgcactgatgacctaatgtacggg
gtcatcatgaactttagctggctgtacaccatgatcaaaataggacattttgataaggcg
cttacagacattgacctagcctacagttactcgcaggaaaaagagctgaagtttttggcc
acgacgttgcgcagcattaaggtcaaggtgacgcgtaacccggcttccttgtccgccgaa
cttcagcagaggttgcttcctgtggtgacatccctccccaagctccgacacctcctgctg
gagtgtgacaaggacggccccaaatactgctccattgttcccctgcactcgtccatggat
gtcacctacagtcccgagaggctgcccctctgctccagctacatgcagattgtggaaatc
atcccgaccctggcccccagcatcgtcatcgtggccttggaggacggctctgtgagcacg
tgggacgtggagagcaggcagctcctccgacagatcgacacggcacgctccgtcgtgctc
ggcatacgcctcaccactgatgagaagtacctggtggtggcgaccaccaagaacaccctg
ctgatctacgataatcacaagtcctgtctgctctccgaggtggaggtcaagtgctccaag
catctcggcgtcactggaggggttgccttcatcaatgggtttacattatctagccagcat
gccctggcttggttggaggccagcaaagaggtgaatgttattgacttggtgtacggctgg
cctttgtaccagttccactgctggtatgaggtcacctgtgtgcagtgctctccagatggc
atgtatgctttctgtgggcaatacctcaacaccacgtccatcttccacctgggcagtggg
gacaagctggccaccatgacgtcagagttttcaggcggttttgttaagtccattttggtg
ctggacacccttaaccagatggtaatgattgacaatgaggggagtttgtcggtgtggaac
acaaaagaagtcacaaacccccgtctcatggaggactatgattgcaggggggatgatagt
gaagttgttgggatcgagctatctgaggaccaacgctccattctcatttgcaaagcaaga
agcatcgaagttctggataccaaagtctggaagatggtggagaagttcaaagccaagcgc
actgaacgatttgtggctgctgtcctctccaaaaatggccagagtattgttgcttccatg
gaaaacacttcatctatttttgtgtggcggagggacagtggccaatgtatggctagtcta
attgagatatctggagccattgtcaagttaatcaagtccacccatcataacctgctactg
tcggtagccagcagtggtgtgctgtcagtttgggacattgacattataacagccatgtct
aacatagacaagacagggaagcgcatattaaacctgcagctttcaggccgagaagacttt
atctacaccatggacggctcagagtccattcacaagtggaacttcaacacgggcttcatt
gagatggttttcaaacacgaaggccttgtggagaactgtgtccttaccacctctggtgac
cttatggtgacttctgatgacaagtccagccagtacatctggcaaaccaccacgggggag
aacatcttccgcatcaacgggcagaagataacccagcttcttatcacccacaacgaccag
tttgtggtctcgctgtgcgagcagaatgcctcacgtgtctggaggttggccactgggcac
aaggtgtgcaacatcctggtcaccctccagcacgctctcatcaccaccgccaacaccttc
ctggttggcactaccaaaaacaagcttcttgctgtcagcctgtggtcaggaagtgtctcc
aagaagttcatctgtgacgacgggattaccattgtcaacttcaagctcatccctgattgt
ccagactatgtggtcttcatcacatccactgagactgtgtttatctggagtgtagcagac
gagtctgtgtgccgtcgtgtccagatgccggccaacttcctgaagaacctggaggatttc
cagatctcgcccaatggcaagctagggatcgtgtccaagggcgacgagaacatcaacgtc
ttggacctccacagtgggaagctccgattggtacatgccgcaggcatcatatggcggcag
aagctctcgagggacggccggtacctcgtgtacatctgcttccgcaactgcgaggaagac
gacgatgcaggcgtggtgtccaacctgattgtcatgcgtctggctgacggcaagagcatc
ggcacatgctctctctacaagacgcccaccttcctgtgcctctcgcagcgggcgctcaac
atcatagtgggtttcgaagacggcagcatcggcacctacaccgtggtggaccgggtcgac
gccgccctcaagatcaaaatcgccacgtccaacagccggcagatcgtcaacaacgctgca
caaaaggtccggcccaagtgcagcacccatgccttcaagaccatctccgactgcatttgg
cgggagtccacagaggtcttctccagggatagccccatcaacctgtccgactcaggcgag
gccgagaccaccacaccaaccaagaagagtgagctgcttcagtga

DBGET integrated database retrieval system