Alosa sapidissima (American shad): 121691629
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Entry
121691629 CDS
T11137
Symbol
rreb1b
Name
(RefSeq) ras-responsive element-binding protein 1
KO
K20210
ras-responsive element-binding protein 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121691629 (rreb1b)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121691629 (rreb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_6
zf-H2C2_5
zf-met
zf-Di19
zf-C2H2_16
zf-C2H2_11
zf-C2H2_REST
zf_C2H2_ZNF292
Motif
Other DBs
NCBI-GeneID:
121691629
NCBI-ProteinID:
XP_041927120
LinkDB
All DBs
Position
1:complement(52021865..52053387)
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AA seq
1745 aa
AA seq
DB search
MNSSSTEQTTIGGGATAAMPTDMVQSDTTHEDLQGKANQENELQDDERAPRQGDVSAQEA
EEARGGEEGGDLTPINSMMNTVMNAGQINGGGVEPISTSTTPVKMPSKSPSANRTGRRNQ
EVKEDRATFICPLCDKSCGSQHQLTMHIRQHNTESGATDHSCSICGKALSSASSLDRHML
VHSGERPYKCSVCGQTFTTNGNMHRHMKIHDKDPSTVLNSNPPSPTKRRRLSVKRKPSVD
DDGELTDQSPNKKVMMEDQAGERGRGKREEELLHCPICFKTFICKYGLESHMETHPDTTL
RCNLCCITFRTHRGLLRHNSVIHKQLPTDPSGRPFIQSNPSVPLGFSDLAFIDFSCHKFP
QIAQVWCETNLRRCSSKFHRFVCEVCNKAFPLQESLDLHTDTHKSPTIATGGAQTPSDIT
GADKAGISAADEKQEEGEGEAVPKSLLPSEEERKAGFLEYLGLQHKSKVKPVPSEAEIQQ
AILDSIRVIRVEPAVTSLPQEASSSLSQSSALNLLSLQPLPRGFVLGPDSGLLVHPISGQ
AGVDVQQILKMATSVSSQMAKAAAAGHPQHQQGEGKHVQPLKPKPLVTPRSSVGTSTPPP
PPMSAQQASPGYISPSLPPPTGHLLRTPKQSSSSSSSSSNSSSSSSSPVNQGYSWENVQM
GSESAAATTTVPYDAAPGGVKREEAGGKEKSKVPAKTEYPCRFCTQVFSFPAGLQAHMRH
HLGASPYQCSICSYAAPDKATLIRHLRTHSGERPYVCRLCHYPFTVKANCERHLRKKHMK
NTRKEIEKNIEYVTSTSSGGGSGGPASTLDLLDPAVASTTACRYCGEDLNNYRALQIHLR
THNGCQRKPYECRQCGAAFLAKRNCIHHLLKCHPEVPEREIEDHITALAPVMATTTTTAA
LQSTQPLSSSNGTLVQSAKLDASPYSLVADQDQPLDFSNKSSSITIKREAAPSPQPLPYD
FSMEPIDLSIPKDPERKRMKREATDPVPLLCAVADIKKEMPSSSTHKALEDRPILQRTFE
ISPPQLLASALGSDQLKSTARLKPLLPKPCSVANPTELPPLASIAQIISSVSAAPGLLKA
GSPGIADSGRGLMGVDVLNSAFGLDSTLEDSLVTGSSKKKGKKQPAAEEMDDSGFGMAVG
LDLESSGEFPSVEKMLATTDANKFSPYLRPSPVEPALEEMERERQSTSEEEKEGNKDKQR
PRPQSKGKKNAYSNSVQKMTCPYCPRVFPWASSLQRHMLTHTGQKPYPCPQCDAFFSTKS
NCERHLLRKHGLTSRLLQSNGQRSKGRGEEGSQGSAESISDVEAGVHTDAGDAHPSSDGS
SSSAETHEPTQQEQPAAAEQNAQSGSDDADSRADELDSATVEDGDDTQSNTSLDVNLACK
LIDFKLSADGQEQPAAVASPGAARVEPESGSSDEFQHTCPTCKKSFRHAATLSRHLKSHL
QEALAEEVAKKKGRQQRPTPSSSPKAGEVDGGTPEKDVNGSSVETSGAEEDEREKDREEQ
SDEEEDSGSSESKGGDGENGASGKTDKRKKICNMCNKRFWSLQDLTRHMRSHTGERPFKC
QTCERTFTLKHSLVRHQRIHQKPQDSKGCDAEDEDEEMSEALLRDDLGSEEGEGFPCASG
SESESIPCSTNPATESEMESEKKESGDEHRDEKEGDDNQEEVKEEENEEEEVEKKKEELA
IGEKKKEEAGEAVVEETGVSTEEPLKESNANNSVSSEGQPGGASEPCPGQADDMAEAEKH
QEPIQ
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagctccactgaacagacgactatcggaggcggggccaccgctgccatgccg
acggacatggtccaatccgacacgacgcacgaggacctccaagggaaggccaaccaagag
aacgagttgcaagatgatgagagggcgccccggcagggtgatgtaagcgcccaggaggcg
gaggaggcgaggggaggagaggagggaggagacctgactcccatcaactccatgatgaac
acggtcatgaacgcggggcagatcaacgggggcggcgtggagcctatttccaccagcacc
acgcccgtcaagatgcccagcaagtccccctctgccaatcggacggggaggaggaatcag
gaggtcaaagaggatcgcgcgactttcatttgcccgctgtgtgacaagtcctgtggctcc
cagcaccagctcactatgcacatcagacagcacaacactgagagtggcgccactgaccac
tcgtgcagcatctgtgggaaggccctgagctcggccagctcgctggaccgccacatgctg
gttcacagtggcgagcggccctacaagtgctccgtctgtggacagaccttcaccaccaac
ggcaacatgcacagacacatgaaaattcacgacaaggacccaagcactgtcctcaactcc
aacccaccctccccaaccaagcgcagacgcctctctgtgaagaggaagcccagtgtggac
gatgatggagagttaactgaccagtcccccaataaaaaggtgatgatggaggatcaggcg
ggggaacgaggtcgaggcaaacgcgaggaggagctcttgcactgccccatctgcttcaag
accttcatttgtaaatatgggctcgagtcccacatggagactcatccagacactacactg
aggtgtaatctgtgctgcatcaccttccgcactcatcgaggccttctccgccataactcg
gtcatccataagcagctacccactgacccctcgggacgacccttcatccagagcaacccc
tcggtgcctctcggcttcagcgacttggctttcatcgacttctcctgccacaagtttcct
caaattgcccaggtttggtgtgaaacaaacctgcgcagatgctcgagcaagttccaccgg
tttgtgtgcgaggtctgcaacaaggccttccccctgcaggagtctttggatctgcacaca
gacacccacaaatcccccaccatcgccacaggtggggctcagacgcccagtgacatcacc
ggcgcagataaagccgggattagtgccgcagatgagaagcaggaggagggggagggggag
gccgtgccaaagagccttcttccctccgaggaggagcgcaaggccggcttcctagagtac
ctcggcctgcagcacaagtccaaggtcaagccggtgccgtcggaggctgagatccagcag
gccatcctggacagcatccgggtgatccgcgtggagcccgccgtgacgagcctacctcag
gaggccagcagcagcctgagccagagcagcgcgctcaacctgctctcgctgcagccgctg
ccccgcggcttcgtgctggggccggacagcgggctgctggtgcatcccatcagtggccag
gccggggtggacgtgcagcagatcctcaagatggccacgtccgtgtcgtcgcagatggcc
aaggcagcggcggccggacaccctcagcaccagcaaggcgaggggaaacacgtgcagccg
ctcaagcccaagccgctcgtgacgccgcgctccagtgtgggcacgtccaccccgccgcca
ccgcccatgagcgcccagcaggcctcgcccggctacatcagccccagcctgccgccgcca
acgggccacctccttcggacccccaagcaatcctcgtcttcctcctcctcctcctccaac
tcctcctcgtcctcctcctcccctgtcaaccagggctacagctgggagaacgtgcaaatg
ggctccgagagcgccgccgccaccaccaccgtgccttacgacgcggccccgggcggcgtc
aagcgcgaggaggcgggcggcaaggaaaagagcaaggtgccagccaagaccgagtacccg
tgccgcttctgcacgcaggtgttctccttccccgctgggctccaggcgcacatgcgccac
cacctgggggcctcgccctaccagtgcagcatctgcagctacgccgcgccggacaaggcc
acgctcatccgccacctgcgcacgcacagcggtgagcggccctacgtctgccgcctctgc
cactaccccttcaccgtcaaggccaactgcgagcggcacctgcgcaagaagcacatgaag
aacacacgcaaggagatcgagaagaacatcgagtacgtcacgtccacaagttcgggcggc
ggcagcggcggccccgcgtccacgctggacctcctggacccggcggtcgccagcaccacc
gcctgccgctactgcggcgaggacctcaacaactaccgggcgctccagatccacctgcgc
acgcacaacggctgccagcgcaaaccgtatgagtgccgccagtgcggagcagccttcctg
gccaagcgcaactgcatccaccacctgctcaagtgccaccctgaggtccccgagagggag
atcgaggatcacatcaccgctctggcgccagtgatggccaccactaccaccactgctgct
ctccagagcacccagcccttgtcatcttccaatggcacccttgtccagtctgctaaactc
gacgccagcccctactctctcgtcgctgaccaggaccagcctctagacttctccaacaag
tccagcagcatcaccattaaacgggaagcggcgccttcgccacagcccttgccgtatgac
ttttccatggagccgattgacctgtccatccccaaggacccagagaggaagaggatgaag
cgtgaggcgacggaccctgtgcccctcctgtgtgctgtggcggacatcaagaaggagatg
ccctcgtccagcacgcacaaagcgctggaggacaggcccatccttcagaggacttttgaa
atctctccaccacagctgctggcctcggctctcggtagcgaccagctcaagtccactgcg
aggctgaagccgctgctgcccaagccgtgttcggtggcaaaccccaccgagcttccccct
ctggcctctattgcgcagatcatctcctccgtgtccgctgccccagggttgctcaaagcg
ggcagccccggcatagccgacagcggcagagggctgatgggggtggacgtcctgaatagc
gcctttggcctggactccactctggaggactctctggtcacagggagctccaagaagaaa
ggcaagaagcagcctgccgcggaggagatggacgacagcggcttcggcatggccgtcggg
ctggacctggagtccagcggcgagttccccagcgtggagaagatgctagccaccacagac
gctaacaagttcagcccttacttgcgccctagccccgtggagccggcgctggaggagatg
gagagagagaggcagtccaccagcgaagaggagaaagaagggaataaagacaagcagagg
ccacgacctcagagcaaagggaagaagaatgcttactccaattcagtgcagaagatgacc
tgcccctactgcccacgggtgtttccatgggctagctcgttgcagaggcacatgttaaca
catacaggtcagaagccatatccatgccctcagtgtgatgcattcttctccaccaagtct
aattgtgagcgtcacttgctccgcaagcacggtttgaccagtcgcctgctccagagcaat
gggcagcgctccaaaggcagaggagaggaagggtcccaaggaagcgcagagagcatatct
gatgtggaggcaggagtgcacacagatgcaggagacgctcacccttcctctgatgggtcc
agcagcagtgccgagactcacgagcccacgcagcaggagcagccggccgcagcggagcag
aatgcccagagtgggtcagatgacgccgacagcagggcagacgaactggacagcgccaca
gtcgaggacggtgacgacacgcagagcaacacaagtctggatgtgaatctggcctgtaag
ctcattgacttcaagctgtcggccgacggtcaggagcagcccgctgcggtggcctctcct
ggcgcagcccgggtggagccggagagcggctcctcagatgagtttcagcatacctgcccc
acctgtaagaagagcttccgccacgcggccaccctcagccgccacctgaagtcccacctg
caggaggccctggccgaagaggttgccaagaagaagggccgccagcagaggccgaccccg
agctcctctcccaaagctggggaggtggacgggggcaccccggagaaggacgtgaacggc
agcagtgtggagacgtccggggccgaggaggacgagagagagaaggaccgagaggagcag
agtgatgaggaggaagacagcggctcctccgaatctaaggggggcgacggcgagaacgga
gcctcagggaagacggacaagaggaagaaaatctgcaacatgtgcaacaaacggttctgg
agccttcaggacctgactagacacatgcgctcacacacaggtgagaggccatttaaatgc
caaacatgtgagcggaccttcaccctaaagcacagcctagtgaggcatcagcgcatccac
cagaagccccaagacagcaagggctgtgacgccgaagacgaggatgaggagatgagcgag
gccctgctgagggacgacctgggctccgaggaaggagagggattcccctgcgcctcgggg
agcgagagcgagtccatcccctgcagcaccaaccctgctacggagagcgagatggagagc
gagaagaaggagtcaggggatgaacacagggatgagaaagaaggagacgacaaccaggaa
gaagtaaaagaggaggagaacgaggaagaggaggtggagaagaagaaggaggaattggcg
attggagagaagaagaaagaggaggcaggggaagcagttgtggaggagacgggggtgtcg
acagaggagcccttaaaagagtctaatgccaacaacagtgtttcctcagaaggccagcca
ggtggcgctagtgagccctgtccgggccaggctgatgacatggcagaggctgagaaacat
caggagcccattcagtga
DBGET
integrated database retrieval system
