KEGG   Alosa sapidissima (American shad): 121691725
Entry
121691725         CDS       T11137                                 
Symbol
stxbp5l
Name
(RefSeq) LOW QUALITY PROTEIN: syntaxin-binding protein 5-like
  KO
K08518  syntaxin-binding protein 5
Organism
asad  Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:asad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:asad04131]
    121691725 (stxbp5l)
Membrane trafficking [BR:asad04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    121691725 (stxbp5l)
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    121691725 (stxbp5l)
SSDB
Motif
Pfam: LLGL Beta-prop_THOC3 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR5 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Lgl_C PEP5_VPS11_N Synaptobrevin Beta-prop_EML Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 121691725
NCBI-ProteinID: XP_041927121
LinkDB
Position
2:39700236..39865378
AA seq 1185 aa
MKKFRKVLDGLTTSSPASTGGSPSCGSAAGTPTAAPTPREIDIPETLMSENFQICKTVRH
GFPYQPTAVAFDPVQKILAIGSRSGGVRILGQPGVDSFCQHESGATVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
VLSGYVIMWNKAIELATKTHPGPVVHLSDSPKDEGRLLIGFESGTIVMWDLKAKKADFRI
YYDEAIHSVSWHHEGKQFMCSHSDGSLSMWNLRNTAKPFQVTFPHGKSQKDVRKESCKPI
LKVEYKTCKNSEPFVIFSGGLSYDQAGRRPTLTIMHGKAITVLEMDHPIVEFLVLCDTPY
INEVQEPYAVVVLLEKDFIVVDLTQSNFPIFENPYPMDIHESPVTCTAYFSDCPPDVIPV
LYSIGAKHKKTGYSHKEWPLSGGTWTVGSQSYPEIIITGHADGTIKFWDATAMTLQMLYK
LKTSKVFEKPRVAEGSRAADLAEEDPYAVQMVNWCPQSRLLCVAGISANLILFRLSRHEA
NTNITALEVRLHCDMDDVISPSDTENNPSLTETSGHSPQPPPSPRPTTPDSGRDSIACLK
VKERVVRLPAGYQAELVVQLQWVDGEPPQPITSVDINSAYGLLALGNCNGLAVVDYLQKT
VLLCMSTLDLYGPADPFQRLTHSPRKNRQSTSDLCMRGLSNLYSDSKKRIRTSYQSLTEL
SDNQVSLDMERSKSPTSDHVNGHCPSPVSSQQAGVGGRGRMPGAPAGEGPRLARRGPGRP
PFRKAQSAACMEISLPVATHTEESRENSFSRSRSSSVSSIDRDTKEAVSALQFGESYGRK
GDALPTPCLWVGTSLGLVLLMPLSIPTDDQERMEDPVTVAPPVGTVLMLKGSVLRFAFLD
CGGAVMQTPYEVWRDPNASRRPPSGRGGASWSTSRRARRRRPARQGQLAVVCSERQAKVF
LMPSQACLYVHNITEASFVIRADIVSVSASICLACFLANGHVMTLSLPSLRPLXDVNYLP
LTDMRIARTFCFSHGGQALYLNSPTEIQRITYSQDMCDNLQEMLGELFIPIETPEAQNRG
FLKGFFGGSAQTFDREELFGEAAAGKASGSLAKHIPGQGGMEGMKVAASGVVGDLARARI
ALDERGQRLGELEDRTALMMTSAECFSKNAHALMLRCKDKKWYQW
NT seq 3558 nt   +upstreamnt  +downstreamnt
atgaagaagtttcgtaaggtgctggacggtttgaccacctcctctcctgcgagcactggc
ggatcgccctcgtgcggcagtgccgctgggacccccactgcagcaccgaccccgcgggag
atcgacatcccggagacgctcatgtcagaaaacttccagatttgtaagacggtgcgtcat
ggcttcccatatcagccaactgctgtggcctttgatccagtgcagaagattctggccatc
ggctcccgctctggaggagtgcgcattctgggtcagccaggagtggacagcttctgccaa
cacgagagtggagccaccgtgcttcagctgcagttcctcatcaatgagggggcgctggtc
accgcctgcgcagatgacaccctacacctgtggaaccttcgacagagacggccagccatc
ctgcactccctcaagttcaacagggagaggatcactttctgccacctgcccttccagagt
aagtggctgtacgtgggaacggagcgtggaaacacccacatcgtcaacatcgagtccttc
gtcctgtccggctacgtcatcatgtggaacaaggccatagagctagcaaccaaaacacat
cctggccctgtggtgcacctgagtgacagcccaaaagatgaggggaggctgctgattggc
tttgagagtgggaccattgtcatgtgggatctgaaggccaagaaagcagatttcagaatc
tattatgatgaggccatccactcggtgagttggcaccatgaggggaagcagttcatgtgc
agtcactcagacgggagcctcagcatgtggaacctgcgcaacacagccaagcccttccaa
gtcacatttccacacggtaagtcgcagaaggatgtcagaaaagagtcctgtaagcccatc
ctgaaggtggagtacaaaacctgtaaaaacagtgagccgtttgtcatcttttcgggtggt
ctgtcgtatgaccaggcaggccggaggccgacgttgaccatcatgcacggcaaagccatc
accgtgctggagatggaccaccccatcgtggagttcctggtgctgtgtgacacgccctac
atcaatgaagtacaagagccttacgcagtcgttgtcctgctggagaaggatttcatcgtt
gtagacctgacacagagcaatttccccatctttgagaacccctaccccatggacatccac
gagtccccggtcacctgcacggcctacttctccgactgcccgcctgatgtcatcccagta
ctctactccataggggccaaacacaagaagaccggctacagccacaaggagtggcctttg
agtgggggtacttggactgttggatcccagtcctaccctgaaatcatcatcacagggcat
gctgatggaactatcaagttttgggacgccacagccatgactctgcagatgttgtacaag
ctaaagacgtccaaggtgtttgagaagccccgcgtggcggagggttcgcgggcggccgat
ctggccgaggaagacccgtacgctgtccagatggtgaactggtgcccacagagccgcctg
ctctgtgtggcaggcatctccgccaacctcatcctcttccgcctcagccgtcacgaggcc
aacaccaacatcaccgctctggaggtgcgtctgcactgtgatatggatgatgtcatatcg
ccgtcggacactgagaacaatcccagtctcacggagaccagtggccactccccccaaccc
ccaccgagcccccggcccaccacacctgatagcggcagagacagcattgcctgcctcaag
gtgaaggagcgggtggtgcggctgcctgctgggtaccaggctgagctggtggttcagctg
cagtgggtggatggggagcctcctcagccaatcacaagcgtggacatcaactctgcctac
ggcctcctggctctagggaactgtaatgggctggcggtggtggactacctgcagaagacg
gtgctgctgtgtatgagcactctggacctgtacggaccagctgaccccttccagcgcctc
acacactccccacgcaagaacaggcagtccacctcagacctgtgcatgcgcggcctgtct
aacttgtattccgactcaaagaaacggatccgcacgtcctaccagagccttacggaactc
tccgataaccaagtgtctctggacatggagcgcagcaagtccccaacctcagatcatgtg
aatggtcactgcccgagccccgtgtcctcccagcaggccggtgtgggggggcggggccga
atgccgggtgcgccggcgggggaggggcctcggctggcccgcaggggccctggcagaccg
cccttccgaaaagcccagtccgccgcatgcatggagatctccctgcctgtcgctacgcac
accgaagagagcagggagaactcgttcagtcgctctcggagctccagcgtgtccagtatt
gaccgggacactaaggaggcggtcagtgcgctgcagttcggcgagtcgtatgggcgtaag
ggggacgcgctgcccacgccgtgcctctgggtcgggaccagcctgggcctggtgctgctc
atgcccctgtccatccccaccgacgaccaggagcgcatggaggaccccgtcactgtcgca
ccaccggtgggcacggtgttgatgctaaaaggttctgtgctgcgctttgccttcctggac
tgcgggggcgctgtgatgcagacaccgtacgaggtgtggcgcgaccccaacgcgtcccga
cgacccccgagcggccgcggcggcgcaagctggtcaacttctcgccgggctcgtcgcagg
aggccagcgcggcagggccagctggccgtggtgtgctcggagcggcaggccaaggtcttc
ctcatgccctcacaggcctgcctctacgtgcacaacatcaccgaggcctccttcgtcatc
cgcgccgacatcgtgtccgtctccgccagtatctgcctcgcctgcttcctcgccaacgga
cacgtcatgaccctcagtctgcccagcctgcggccgctgnctgacgtaaactacctgcct
ctgacggacatgcgcatcgccaggacgttctgcttcagtcacggagggcaggccctctac
ctgaactcccccaccgagatccagcgcatcacctacagccaggacatgtgcgacaacctg
caggagatgctgggggagctctttattcctatagagacacctgaggcccagaacagaggc
ttcctcaagggcttctttggaggcagcgcgcagaccttcgacagagaggagctctttggc
gaggcggcggcaggcaaggcgtcgggcagcctggcgaagcacatcccagggcaggggggc
atggagggcatgaaggtggcggccagcggggtggtcggggacctggcgcgcgcccgcatc
gctctggacgagaggggccagcggctgggcgagctggaagatcggaccgctctaatgatg
accagcgcagagtgcttctccaaaaacgcccacgcgctgatgctgaggtgtaaggacaag
aagtggtaccagtggtag

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