Alosa sapidissima (American shad): 121692557
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Entry
121692557 CDS
T11137
Symbol
gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04080
Neuroactive ligand-receptor interaction
asad04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121692557 (gabrb1)
04082 Neuroactive ligand signaling
121692557 (gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121692557 (gabrb1)
Ion channels [BR:
asad04040
]
Ligand-gated channels
GABA-A
121692557 (gabrb1)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
121692557
NCBI-ProteinID:
XP_041927147
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Position
19:complement(17889394..17928569)
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AA seq
478 aa
AA seq
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MWTTRDRWRTGILSLPVLVTMVLGAQSPSEPSNMSYVKVTVDKLLKGYDIRLRPDFGGPP
VDVVMSIDISSIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADQLWVPD
TYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWQGGQSVRGVEGIELPQFSIIDYQTLSKKAVFATGSYPRLSLSFKLKR
NIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIP
YVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKRKAENAAKSTNEKQQRMDANK
VQVDAHGNIHLANMDLRNEMTGVEMLGGLGGTNTMFSYDSASIQYRKPLTGRDLYGRPTP
SLERPIGPKKSRLRRRASQLKVKIPDLTDVNAIDKWSRVIFPITFTFFNLVYWLYYVH
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgactcgagaccgttggcgcacggggattctctctctcccggtgctagtcacc
atggttctgggcgcgcagagcccgagcgaacctagcaacatgtcatacgtcaaagtcacc
gtggataaactgctgaaaggctacgacatacgactgaggccagactttggaggtccccct
gttgacgtcgtcatgagcattgacatctccagcattgatatggtatcagaagtgaacatg
gactataccatcaccatgtacttccagcagtcgtggcgggacaagcgtttgtcctacaca
gggattcctctcaatctgacacttgacaaccgcgtcgctgaccagctctgggtgcctgac
acctacttcataaacgacaagaaatcctttgttcacggagtcactgtcaagaaccgcatg
atacgactgcacccagatggaactgttctctatggactcaggatcacgaccactgccgcc
tgtatgatggacctgcgcagatatcccctagatgaacagaactgcaccttggagatcgag
agctacggctacaccacggacgacatcgagttctactggcagggcggtcagtcggtgagg
ggcgtggagggcatagagctgcctcagttctccatcattgactaccaaaccctgtccaag
aaagctgtatttgccacaggttcgtacccccgtttgtctttgagttttaagctgaagagg
aacatcggctacttcatcctgcagacctacatgccctccaccctgatcaccatcctatcc
tgggtctccttctggatcaactacgacgcctccgctgctcgggtggctttagggatcact
actgtgctgaccatgaccaccatcaacacgcacttgcgcgagacgctgcccaagatcccc
tatgtgaaggccatcgacatctacctgatgggctgcttcgtgtttgtgttcctggccctg
ctggagtacgcgtttgtcaactatatcttcttcggccgtgggccccacctgcagaaaagg
aaggccgagaacgctgccaagagcaccaacgagaagcagcagcgcatggatgccaacaag
gtccaggtggacgctcacgggaacatccacctggccaacatggacctgcggaatgagatg
accggcgtggagatgctgggtggcctgggtggcaccaacaccatgttctcctacgacagc
gccagcatccagtaccgcaagccgctgacgggtcgcgacctgtacggccggcccacaccc
tcgctggagcggcccatcgggcccaagaagagccgcctgcgccgccgggcctcgcagctg
aaggtcaagatccccgacctgacggacgtcaacgccatcgacaagtggtcgcgtgtcatc
ttccccatcacctttaccttcttcaacctggtctactggctctactatgtgcactag
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