Alosa sapidissima (American shad): 121692564
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Entry
121692564 CDS
T11137
Name
(RefSeq) 5'-3' exonuclease PLD4
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00564
Glycerophospholipid metabolism
asad00565
Ether lipid metabolism
asad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
121692564
00565 Ether lipid metabolism
121692564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121692564
Enzymes [BR:
asad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
121692564
Membrane trafficking [BR:
asad04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
121692564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
DUF7436
Motif
Other DBs
NCBI-GeneID:
121692564
NCBI-ProteinID:
XP_041927158
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All DBs
Position
19:3014808..3019633
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AA seq
501 aa
AA seq
DB search
MSRAASDTLGSCSPYERFDDVYVPKQQCSFRVIYVALSVGCLVGFAALLCFSIIEKINSE
EQFTQRTEEVGNKTAIINEWQETSEQSRVELVEGIPLDLDYGPNATFGTPLYKTWKSLLS
MATKQVEVASFYWTLTGEDIFVNSSTDAPGRDILKAFKALPSRNVSVHVVASFTCVGKNS
TDLKELEESGVHVRRVNFRRLTNGVLHSKFWIIDRRHIYIGSPNMDWRSLTQVKELGVVI
YDSPRLAHDLIKIFDSYWMMGHKNASIPEPWPTTFDTSINHERPLLVNLSGVPSSVYIAA
SPPSFCPESRSRDLDAILSAINEAEHFVYVAVMDYYPTTQFTWPPRYWPTIDNVLREAAF
GRHVAVRLLASCGRDTNPAMLPFLRSLEAMRYLRHHISVEVKAFIVPVGNQSTIPYTRVN
HNKYMVTDKVAYIGTSNWSEEYFSTTAGVGLVISSEAHNQSSSARSFQQQLRAVFLRDWD
SPFAVPLNELHKYPDCRMFVA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagagctgcctcagacacacttggatcatgctccccctatgagaggtttgatgat
gtttatgtccccaaacaacagtgttcttttagggtgatctatgtagccctgtcagtgggt
tgtctggtggggtttgcagccttgctctgcttctctataattgaaaagatcaacagtgag
gaacaattcacccaaaggacagaagaggttggtaataaaacagccattataaatgagtgg
caggagacctctgagcagagtagggttgagcttgtagaaggcattccacttgatttggac
tacggcccaaatgccactttcggaactccgctctacaaaacatggaaaagcctactctcc
atggcaaccaaacaagtggaggtggcctccttctattggactcttactggtgaggacatt
ttcgtgaactcgtccaccgacgctcctggccgagatatactgaaggcttttaaagccctg
ccatcaagaaatgtgtctgttcatgttgtggccagttttacctgtgtgggaaaaaactca
actgatctaaaggaactggaggaaagtggtgtccatgtacggagagttaacttccggcgt
ctgaccaatggagtgctacacagtaaattctggattattgatagaaggcacatatatatt
ggaagtcccaacatggactggaggtcgctcacacaggttaaggaacttggagtggtcatc
tatgactccccccgactggcccacgacctcattaagattttcgactcctactggatgatg
ggccacaagaatgcctccatcccagagccctggccaacgacctttgatacctctatcaat
catgagcgccccctgctggtcaaccttagtggtgtccccagctcagtctacattgcagcc
tcccctccctccttctgcccagagtctcgctccagagacttggatgcaatcttgtcggcc
attaatgaggcagagcattttgtttatgtggcagtcatggactactaccccaccactcag
ttcacatggccaccaaggtactggccaacaattgacaatgtgttgagggaggcagcattt
ggacgtcacgtggctgtgcgtctcctggccagctgtggcagggacacaaacccagccatg
ctccccttccttcgctcactggaggccatgcgttacctgcggcatcacatcagtgtagaa
gtgaaagcctttattgtgcctgttgggaatcaatccactattccatacacaagagttaac
cacaacaagtacatggtgacagacaaggtggcatatattgggacatccaactggtcagaa
gagtacttcagcaccactgctggcgtggggttggtgatatcctccgaggcccataaccag
agctcctcagcgcgctccttccaacagcagctcagggccgtgttcctccgggactgggat
tccccgttcgctgtgcctctgaatgaactgcacaaataccctgattgcaggatgtttgta
gcctag
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