Alosa sapidissima (American shad): 121692685
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Entry
121692685 CDS
T11137
Symbol
sptb
Name
(RefSeq) spectrin beta chain, erythrocytic isoform X1
KO
K27409
spectrin beta, erythrocytic
Organism
asad
Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121692685 (sptb)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121692685 (sptb)
Intermediate filaments
Intermediate filament-binding proteins
121692685 (sptb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
121692685
NCBI-ProteinID:
XP_041927418
LinkDB
All DBs
Position
19:16553275..16592181
Genome browser
AA seq
2353 aa
AA seq
DB search
MTSTTDFDNVEIAQQYSRINTRFELFDEELDNDNSSARLFERSRIKALADEREAVQKKTF
TKWVNSILARVSCRISDLYLDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLREQRVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDIIVETGQADQRETYSAKDA
LLLWCQMKTAGYPNVNITNFTTSWKDGMAFNALIHKHRPDLVEYVKLQKSNPTHNLQHAF
NVAEQKLGVTKLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKALAVEGKRVGKVLDHAI
ETEKMIDKYDTLASDLLIWIEETIVVLNNRKLANSLSGVQQQLQAFNTYRTVEKPPKFQE
KGNLEVLLFTIQSRMRANNQRVYTPKEGKLVADINRAWERLECAEHERERVLRDELIRQE
KLEQMARRFDRKAAMRMTWIMENQRLVAQDNFGYDLPAVEAAKKKHDAIETDIAAYEERV
LALMAMSKELEDEHYHDAKRIDARKDNILRLWEYLQELLKARRGRLEKNLTLQRIFQEML
HIINWMDEMKARLLSPDFGKHLLEVDDLLQKHALLEADIAVQADRVHSANAAALKFANGD
SYKPCDPQVIRDRVQHLELCYQELCALAAQRKARLGQSRRLWNFFWETAELESWIREKEH
IFSSLDYGKDLTSVLVLRAKHGAFEDELAARRGHLQEVMDEGQDMVTAKHFGAPQVQARM
DDVRRQWRQLEELSAFRARNLGDTQRFFQLQGDADDFRAWLQDATRQATSDDVGHDEYTT
QRLAKRHRDLRDEAAKNAATLDGLQKQAAALPEELRNTPDIQTRLSDVRDLYMELLSLLE
LRQKKLDDTMALYTIFSETDACELWMGQKETWLVGLETPEKLEDLEVVQNRLAILASEMD
NMQARVDDVNKAAKQLEDSRHPRTKEVKECQTRLNKRWAAFKAMVEDKKHKVDLALSLHN
YGLDCSETETWIKDKTRVIESTQDLGNDLAAVMTIQRKLFGMERDLAAIQDKLDSLRGEA
ERLARDHPESADRIRERQASLDKAWDTLKRTLKDREDSLGEVSKLQTFLQDMDDFQAWLF
KTQKAIASEEMPGNLPEAEELLSLHDAVRADMDGHEEDYHQVRDMGAAVTQGQEDDPQYQ
QLEQRLKGLDKGWDELHKMWDSRKNFLDQGLGFQQFMRDAKQVDAVLNNQEYTLAHLDRA
DTMDGAEKALKKHEDFVSTMDANEEKIISTLDSGQRLVDSRNLYAPKVKDKMDSIQDRYN
KNRRKAIEVSGKLKDNRDLQHFLQNTQDLTLWINEKMLTAQDTSYDEARNLHSKWQKHQA
FMAELASNKDWLNKIDQEGHELMQSKPEFEPIVTERLAQLHELWDKLESTTQDKARLLFD
ANRSELYDQSLDDMKKWLGELQNELQGDDEVKDLASANRQLKKHQLTENQVRDRGRELEE
LQEAVQKHAPLREDRPEMEAEQQALQREFQKVLTPLAQRRGKLEAAKAVHQFYRDAADEI
LWVEERLPLAMSQEHGNNLQSVQLLMKKNQTLQREIEGHQPRVDEVLERGQRMAAAAEGG
PEAQRIREHAKELEGAWAHLQDEMAKRRQRLDGSNEAQQYFNDAEEAEAWIGEQELYMIA
DEKAKDEQSAMVMLKRHLILKQAVDDYADSMRKLADRAHKMMAEDHPDGEAILRRQGQVD
KQYAGLKELAEDRRKKLDHTYHHFLLSREVEDLMQWIAERDVIASSQEMGQDLDHVSILR
DKFRDFARETGTMGQDRVDSVNQIIDQLIEGGHTEAAALAEWKDNVNESWADLLELIDTR
AQLLTASYDLLKYFYDGKELVAQIQEKQNNIPEDVGEDFSKAESFHRMHAAFERDISTLG
KQVQQFQETAARLHAQYAGDQATAIQATEKEVMEAWKGLLDACDGRRAQLVDTADKFRFF
TMVRDLMAWMESIIQQIETQEKPRDVSSVELLMKYHQGIRAEMETRVPKFTECADLGRAL
LARNHRDSAEIKEKLMQMMEKKKEMMLKWDDRWDWLRLLLEVCQFARDASVAEAWLVAQE
PYVASRDLGLTVDEVEKLLKRHEAFEKSTAAWEERFSALERLTTLELLEIRKQQQEMQQY
MTDEDKDTSRREDTGFVEDSSQLYTIEEQSMSASAAVEPTSGHTEGTVGDSTVPIVSEMH
ESASIELDPSVSSQVASREPEKAQTLPAEPPRTQAVILEGTLTRKHELEPAGKKASNRSW
NNLYCVLKPGQLSFYKDAKSFGHGVTYHGEDPMLLSNASCEILSNYKKKKQVFKLRLGDG
SEYLFQCKDEDELQKWTQSVGTATLSLVEEEAPGPSGSTRARSLPPPSSSTIPEASSAKK
DKEKRFSLFTKKK
NT seq
7062 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaccacggacttcgacaacgttgagatcgcacaacagtacagccgcatcaac
acacgcttcgaactgtttgacgaggagctcgacaatgacaacagctcagcccgtctcttc
gagcgctcccgcatcaaagccctcgcagatgaacgtgaggcagtgcagaagaagaccttc
actaagtgggtgaactccatcttggccagggtgtcctgccgaatctcagacctctacttg
gacctcagggatggacgcatgctcatcaaactactggaggtcctctcgggagaacgactg
cccaagcccaccaagggccggatgcgtatccactgtctggagaatgtggacaaggcactc
cagttcctccgagagcagcgggttcacctggagaacatgggctcacacgacatcgtcgac
ggcaaccaccgtctcatcctgggcctcatctggaccatcatcctccgcttccagatccag
gacatcatcgtggagacgggccaggccgaccagagagagacgtactcggccaaggacgcg
ctgctcctgtggtgccagatgaagacggctgggtacccgaatgtgaatatcaccaacttc
accaccagctggaaggatggtatggccttcaatgccctcattcacaagcacaggccagac
ctggtggaatatgtgaagctgcagaagtccaaccccacacacaacctccagcatgccttc
aatgtagccgagcagaagctgggtgtcaccaaactcctggaccccgaagatgtgttcaca
gagaatccggatgagaagtccatcatcacgtatgttgtggccttctaccactacttctcc
aagatgaaggctctggctgtggagggaaagagagtcggaaaggtcctggatcacgctatt
gaaacagagaagatgatagacaagtatgacaccctggcttcagacctgctgatctggatc
gaggagaccatcgtcgtcctgaacaaccgcaagttggccaactccctgagtggcgtccag
cagcagctgcaggcctttaacacctaccgcaccgtggagaaaccacccaagttccaggag
aagggcaacctggaggtccttctcttcaccatccagagtcgcatgagggcaaacaaccag
cgcgtgtacactcccaaagaaggcaaactggtggctgatatcaacagggcgtgggagcgt
ctggagtgtgcggagcatgagcgggagcgggtcctgagggacgagctgatcagacaggag
aagctggagcagatggcccgccgcttcgacaggaaggccgccatgaggatgacctggatc
atggagaaccagaggctggtggcgcaggacaactttggctacgacctgcccgccgtggag
gccgccaagaaaaaacacgacgcgatcgagaccgacatcgccgcctacgaggagcgcgtg
ctggccctgatggccatgtccaaggagctggaggacgagcactaccacgacgccaagcgc
atcgacgcgcgcaaggacaacatcctgcggctgtgggagtacctgcaggagctactaaaa
gccaggagagggcgcctggagaagaacctcaccctgcagaggatcttccaggagatgctc
cacatcatcaactggatggatgagatgaaggcacggctgctgtctccggactttgggaag
cacctgctggaggtggacgatctgctgcagaagcacgctctgctggaggcggacatcgcc
gtgcaggccgacagggtgcactcagccaacgcagctgcgctcaagttcgccaacggggac
agctacaagccatgtgacccccaggtgatccgagaccgtgtgcagcacctggagctctgc
taccaggagctctgtgccctggctgcccagcgcaaggcccgcctgggacagtcgcgtcgc
ctctggaacttcttttgggagacggccgagctggagagctggatccgcgagaaggagcac
atcttctcctcgctggactacggcaaggacctgaccagcgtgctggtgctgcgcgccaag
cacggcgccttcgaggacgaactggccgcccgccgcggccacctgcaggaagtgatggac
gagggccaggatatggtgacggccaagcacttcggggcgccccaggtgcaggcgcgcatg
gacgatgtgcggcggcagtggcgtcagctggaggagctgtcggcgttccgcgcgcgcaac
ctcggcgacacgcaacgcttcttccagctgcagggcgatgctgacgacttccgcgcctgg
ctccaggacgccacgcggcaggccacctccgacgacgtgggccacgacgagtacaccacg
cagcgtctggccaagcggcaccgcgacctccgcgacgaggccgccaagaacgccgccacg
ctcgacgggctccagaagcaggcggcggcgctgcccgaggagctgcgcaacacgcccgac
atccagacgcgcctgagcgacgtgcgggacctgtacatggagctactctcgctgctggag
ctgcggcagaagaagctggacgacaccatggcgctctacaccatcttcagcgagacggac
gcttgcgagctctggatgggccagaaggagacgtggctggtgggcctggagacgcccgag
aagctggaggacctggaggtggtgcagaacagactggctatcctggcctcagaaatggac
aacatgcaggcacgggtggacgatgtcaacaaagcagccaagcagctagaggacagcaga
catccccgcaccaaggaggttaaggaatgtcagacaagactcaataagaggtgggcggcc
ttcaaggccatggtggaggacaagaagcacaaggtggacctggccctcagcctgcacaac
tacggcctggactgcagcgagacggagacgtggatcaaggacaagacgcgcgtcatcgag
tccacgcaggacctgggcaacgacctcgccgccgtcatgaccatccagcgcaagctcttc
ggcatggagcgcgacctggccgccatccaggacaagctggactcgctgcgtggcgaggcc
gagcggctagcccgagaccaccccgagagcgccgaccgcatccgggagcgccaggcgtca
ctggacaaggcctgggacacgctgaaacgcacgttaaaggaccgcgaggactcgctgggc
gaggtcagcaagctgcagaccttcctgcaggacatggacgacttccaggcgtggctcttc
aagacgcagaaggccatcgcgtccgaggagatgcccggcaacctgcccgaggccgaggag
ctgctgagcctccacgacgctgtgcgcgccgacatggacggacacgaggaggactaccac
caggtgagggacatgggtgcggccgtcacccagggccaggaggatgacccgcagtaccag
cagctggagcagaggctcaagggcctggacaaaggctgggacgagctacacaagatgtgg
gacagccgcaagaatttcctggaccagggtctcggcttccagcagttcatgagggacgcc
aagcaagtggacgctgtcctgaacaatcaggagtacaccttggcccatcttgaccgggca
gacaccatggacggagcagagaaggccctgaagaagcatgaggactttgtgagcaccatg
gacgccaacgaagagaaaatcattagcacactggacagtggacagagactagtagacagc
aggaacctctatgcaccaaaggtgaaagacaagatggactccatccaggacagatacaat
aaaaatcgaaggaaggcgatagaggtttcaggcaaattgaaagacaaccgggaccttcaa
cacttccttcagaatactcaggatctcacattgtggataaatgagaagatgctcaccgcc
caggacacgtcgtatgatgaggccaggaacctccacagcaagtggcagaagcaccaggct
ttcatggctgagttggcctccaacaaagactggctcaataagattgaccaggagggccac
gagctgatgcagtccaagccggagttcgagcccattgtgacagagcgtctggcccagctc
cacgagctgtgggacaagctggagtccaccacgcaggacaaggcccggctgctgttcgac
gccaaccgctccgagctgtacgaccagagcctggacgacatgaagaagtggctgggcgag
ctgcagaacgagctccagggagacgacgaggtcaaggacctggccagtgccaacaggcaa
ctcaagaagcatcagctgacggagaaccaggtgcgggaccgcggccgcgagctggaggag
ctccaggaggccgtgcagaagcacgccccgctcagggaggaccggcccgagatggaggcc
gagcagcaggccctgcagagggagttccagaaggttctcacccccctcgcccagcgccgc
ggcaagctggaggccgccaaggccgtgcaccagttctacagggacgctgcggatgagatc
ctatgggtggaagagaggttaccgctggcgatgtctcaagagcatggcaacaatctccag
tctgtccagctcctcatgaagaagaaccagaccctgcagagggagatcgagggccaccag
ccgcgagtggacgaggttttggagcgcggccagcgcatggcggcggcggccgagggtggt
ccagaggcgcagcggatccgtgagcacgccaaggagctggagggggcgtgggcgcacctg
caggacgagatggccaagcgccgccagcggctggacggctctaacgaggcgcagcagtac
ttcaacgatgctgaagaggccgaggcctggatcggagagcaggagctgtacatgatcgca
gacgagaaggccaaggatgagcagagtgccatggtgatgctgaagaggcacctcatcctc
aagcaggccgtggatgactacgccgactccatgcggaagctagcagaccgtgcccacaag
atgatggcagaggatcatccagatggtgaggcgatcctccgtagacagggtcaggtggac
aaacaatacgctggactgaaggagctggccgaggaccgcaggaagaagctggaccatact
tatcatcacttcctgctcagccgcgaggtggaggacctgatgcagtggatcgccgagcgc
gatgtcatcgcctcctcgcaggaaatgggacaggacctcgaccacgtctctatcctgcgg
gataagttcagggactttgctcgggagacaggtaccatgggtcaggaccgcgtggactcg
gtcaaccagatcatcgaccagctgatcgagggcggacacacggaggccgccgcgctggcc
gagtggaaggacaatgtcaacgagagctgggctgacctgctggaactcattgacactcgg
gcgcagctcctcacggcctcctacgacctgctcaagtacttttacgatggtaaggagctg
gtggctcagatccaggagaagcagaacaatattcctgaggatgtgggagaggacttcagc
aaggccgagtccttccaccgcatgcatgctgccttcgagagggacatcagtacactgggc
aaacaggtccagcagttccaggagaccgccgctaggctgcacgcccagtatgcaggcgac
caggccacagccatccaggccacggagaaggaggtgatggaggcctggaagggcctgctg
gacgcctgtgacggccggcgcgcccaactggtggacacggcagacaagttccgcttcttc
accatggtcagggacctgatggcctggatggagagcatcatccagcagatcgagacccag
gagaagcccagggatgtgtcctctgtagagctcctgatgaagtaccaccagggtatccgt
gccgaaatggaaactcgggtgccaaagttcacagaatgtgccgaccttggccgggcgctg
ttagctcgcaaccaccgtgactcagctgagatcaaagagaagctaatgcagatgatggag
aagaagaaagagatgatgctcaagtgggacgaccgatgggattggctcagattattgttg
gaggtgtgccagtttgcacgtgacgcgtcggtggcggaggcctggctggtggcccaggag
ccttacgtggccagcagggacctgggcctcaccgtggacgaggtggagaagctgctcaag
aggcacgaggccttcgagaagtccactgctgcctgggaggagcgcttctcagctctggag
cgtctcaccacgcttgaattgttggaaattaggaagcagcaacaggagatgcaacagtac
atgacagatgaagataaagataccagcaggagagaagacacaggatttgtggaggattcc
tcccagctttatacaatagaagagcagtcaatgtctgcctcagctgcagtggagccaacc
tcaggtcacacagagggcaccgtgggcgactccaccgtgcccatcgtctcggagatgcac
gagagcgcctccatcgagctggacccatccgtgtccagccaggtcgctagcagagagccc
gagaaggcccagacgctaccggcagaaccgccccgaacacaggccgtcatcttagagggc
accttgacacgcaagcacgagctggagccagcgggcaagaaggcttccaacaggtcctgg
aacaacctgtactgtgtgctgaagccaggacagctttctttctacaaagatgccaagagc
tttggtcatggtgtcacataccacggtgaagaccccatgctgctcagcaacgcttcctgt
gagattctgagcaactacaagaagaagaagcaggtcttcaagctacggctgggagatggc
agtgagtatctgttccagtgtaaagatgaggatgagctccagaaatggacccagtctgtg
gggacagccaccctgtccctggtggaggaggaggcccctgggccctcagggtccaccagg
gcccgcagcctgccccctccctcctcatccaccatccccgaggcctcctccgccaagaag
gacaaggagaagaggttcagtctcttcaccaagaagaagtga
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integrated database retrieval system
