Alosa sapidissima (American shad): 121692866
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Entry
121692866 CDS
T11137
Symbol
actn1
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04510
Focal adhesion
asad04517
IgSF CAM signaling
asad04518
Integrin signaling
asad04519
Cadherin signaling
asad04520
Adherens junction
asad04530
Tight junction
asad04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121692866 (actn1)
04518 Integrin signaling
121692866 (actn1)
04519 Cadherin signaling
121692866 (actn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121692866 (actn1)
04520 Adherens junction
121692866 (actn1)
04530 Tight junction
121692866 (actn1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
121692866 (actn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121692866 (actn1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121692866 (actn1)
04147 Exosome [BR:
asad04147
]
121692866 (actn1)
Membrane trafficking [BR:
asad04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121692866 (actn1)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121692866 (actn1)
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121692866 (actn1)
Exosomal proteins of colorectal cancer cells
121692866 (actn1)
Exosomal proteins of bladder cancer cells
121692866 (actn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
121692866
NCBI-ProteinID:
XP_041927782
LinkDB
All DBs
Position
19:19281649..19325003
Genome browser
AA seq
891 aa
AA seq
DB search
MDHYDADENNYMAPEDDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRD
GLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNAK
MTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCA
LIHRHRPELIDYGKLRKDDPMTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTY
VSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRA
PENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMV
SDIANAWGSLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHEAWTDGKEEMLQHRD
YETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQRICD
QWDALGALTQKRSEALQRTEKLLETIDQLYLEFAKRAAPFNNWMEGAMEDLQDTFIVHTI
EEIQGLSTAHEQFKATLPEADKERQAILGIHNEIAKIVQTYHVNMAGTNPYTTINPQEIN
TKWDKVRQLVPQRDQALIEEHARQQNNERLRRQFANQANVIGPWIQTKMEEIGRISIEMH
GTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLL
TTIARTINEIENQILTRDAKGISQEQLSEFRASFNHFDRDHSGTLGAEEFKACLISLGFD
IANDPQGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKVLAGDKN
YILADELRRELPPDQAEYCIARMAPYTGPDAVPGALDYMSFSTALYGESDL
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggatcattatgacgccgatgaaaataattacatggcaccagaagacgactgggatcgc
gatctccttctggatcctgcatgggagaaacagcagcggaagacattcacagcatggtgt
aactcccacttgaggaaagcaggaactcagattgagaatattgaggaggacttcagagat
ggactcaaactcatgctgcttcttgaggtcatctcaggagagcgcttggccaagcccgag
agagggaagatgagggtccacaagatctccaacgtgaacaaagcgcttgacttcatcgcc
agtaaaggagtcaaactcgtctctattggagcagaggaaatcgtggatggcaacgccaag
atgaccctgggaatgatctggaccatcatcctccgcttcgctatccaggatatctctgtg
gaagagacttcagccaaagaaggactgctgttgtggtgtcagagaaagactgccccctac
aagaatgtcaacatccagaactttcacatcagctggaaagatggattgggattctgcgcc
ctcattcacagacatcgtccagaactcattgactatggaaaacttcgcaaagatgaccca
atgaccaatctgaacacagcatttgacgtagctgagaagtacctggacattcccaaaatg
ttggacgcagaagacatcgttggtacagcccgccctgacgagaaggccatcatgacctac
gtctctagcttctaccacgccttctctggcgcccagaaggcggagacggcggccaaccgc
atttgcaaagtgctggctgtcaatcaggagaatgagcagctgatggaggactacgaaaag
cttgccagcgatctgctggagtggatccgccgcaccatcccgtggctggagaaccgggcg
ccggagaacaccatgcaggccatgcagcagaagctggaggacttccgcgactaccggcgc
ctgcacaagccgcccaaggtgcaggagaagtgccagctggagatcaacttcaacacgctg
cagaccaagctgcgcctcagcaaccggcccgctttcatgccctccgagggcaagatggtg
tcggacattgccaatgcatggggatccctggagggtgctgagaagggctatgaggagtgg
ctgctgaatgagatccgcaggctggagagactcgaccacctcgctgagaagttccgccag
aaagccgccatccacgaggcctggaccgatggcaaggaggagatgctgcagcatcgggac
tatgagacagccacgctctcggagatcaaggccctgctgaagaagcacgaagcgttcgag
agcgacctggccgcacatcaggaccgcgtggagcagatcgcagccatcgcccaggagctc
aatgagttagactactacgactctccaagtgtgaacgcacgctgccaaaggatctgtgat
cagtgggacgctcttggagcactgacccagaaacgtagtgaagctctacagcggactgag
aaactgctggagaccattgatcagttgtatctcgagtttgccaaacgtgccgcccccttc
aacaactggatggagggagctatggaggacttgcaggacaccttcattgtgcataccatc
gaggagatacagggcttaagcacagctcatgagcagtttaaggcgaccctccctgaggcg
gacaaggagagacaggccatcctgggcatccacaatgagattgctaagattgtgcagacc
taccacgtcaacatggccggcaccaacccttacaccaccattaaccctcaggagatcaac
accaagtgggacaaggtcaggcagctggtccctcagagagaccaggccctgattgaggag
cacgcccgccaacagaataacgagcgactcagacggcagtttgccaaccaggctaacgtc
atcggaccctggatccagaccaagatggaggagattggccgtatctccattgagatgcat
ggcaccctggaggatcagctgaaccacctgcgtcagtatgagaagagcatcgtcaactac
aagccaaagattgaccagctggagggagaccaccagctcattcaggaagccctcatcttc
gacaacaaacacaccaactacaccatggagcacatccgtgtgggctgggagcagcttctc
accaccatcgcacgcaccatcaatgagatcgagaaccagatcctcaccagagatgccaaa
ggcataagccaggaacagctaagcgagttcagagcctccttcaaccactttgatagggat
cactcgggcactcttggggctgaggagttcaaggcctgcctgatcagcctcggcttcgat
atcgccaacgacccacagggagaggcagagtttgcccgcatcatgagcatcgtggacccc
aacaggttgggagtggtcactttccaggccttcatcgacttcatgtcccgtgagaccgct
gacacagacactgccgaccaggtcatggcctccttcaaagtactggccggggacaagaac
tacatcctggcggacgagcttcgccgtgagctgccccctgaccaggccgagtactgcatt
gcccgcatggcgccctacactggccccgatgctgtgcctggtgcactcgactacatgtcc
ttctccaccgccctctacggagagagtgacctttga
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