KEGG   Alosa sapidissima (American shad): 121692867
Entry
121692867         CDS       T11137                                 
Symbol
dcaf5
Name
(RefSeq) DDB1- and CUL4-associated factor 5
  KO
K11800  DDB1- and CUL4-associated factor 5
Organism
asad  Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:asad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:asad04121]
    121692867 (dcaf5)
Ubiquitin system [BR:asad04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     121692867 (dcaf5)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_EIPR1 Beta-prop_EML_2 EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_WDR41 WD40_RFWD3
Other DBs
NCBI-GeneID: 121692867
NCBI-ProteinID: XP_041927787
LinkDB
Position
19:19258963..19275191
AA seq 880 aa
MKEVMGCGMRSSVGFLSRRKITGHTFMKEEFQRRRLGGCTSLYKKDLLGHFGCVNAIEFS
NNGGEWLVSGGDDRRVLLWHMEKAIHSRAKPLKLKGEHLSNIFCLAFDSTNRKVFSGGND
EQVILHDVERGETLNVFLHDDAVYGLSVSPVNDNVFASSADDGRVLIWDTREPPHGEPFC
LASYTSAFHSVMFNPAEPRLLATANSKEGVGLWDIRKPRSSLLRYGGSLSLQSAMSVRFN
STGTQLLALRRRLPPVLYELHSRLPSFQFDNQGYFNSCTMKSCCFAGDRDQYILSGSDDF
NLYMWKIPKDPEAGGPGRVVNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKVIKVWSP
YQQPDSIGDLEGRVEDKSRSLYTHEEYISLVLNSGSGLSHDYVSQSIQEDPRMMAFFDSL
VRREIEGWSSDSDSDLSEGAILQLHARGRRSTRSTNSATAVVTAAVTAATAAVGEVGGMR
SLPSAGILGVANDDDGGHSSSSENASLLVAQLSDDEEEEEEEEEEEVEEEQEQADLDGEV
LPRRRRGAVRRRRSAFMLDLANDDSDSSSFWFNPVPRPRSPSPPLDRTVLFSELRTPSAS
DSSSSSSSSTWSPTSSSSEGQHQHQQQQQQQQQPPQQPPHEEEDEEEHQQRRRSDTRQRN
AARRRRRSRMHLPSRDADDRPATAQDLYPTHDPCSYPKITIDDPSSSSSSSGETGCADAE
ARPRSRRSLRHRGDSPTRSPGNRPETRFGGRVSSRSPSPTDSELRCMMLAGVKDDKKREN
ESGRRERAGKEGFATSRVDLLASEDPTRNSEDPHQNLPGISGTAEELADDPTDSKTQEGS
ATLRVTKRTRRGSQLDPEGSSLGPAEGSDEGAPSEKKLKT
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgaaggaggtaatgggttgtggcatgagatcgtcggtggggttcctgtcccgaagaaaa
atcaccgggcacacttttatgaaggaagaattccagcgacgtagactgggtggttgcacc
agcctatacaaaaaagacctgctgggccattttggatgcgtgaacgctatagagttctcc
aacaatggaggagagtggcttgtgtccggtggggatgaccgcagggtgctgctgtggcac
atggagaaggccatccactctcgcgccaagccactcaagctgaagggagagcacctgtcc
aacatcttttgtctggcattcgacagcaccaacaggaaggtgttctctggagggaatgat
gagcaggtgatccttcatgatgttgagaggggcgagactctcaacgtgttcctccatgat
gacgcagtgtacggcctgtccgtcagccctgtaaacgacaacgtattcgccagctccgcc
gatgatggtcgagtcctcatttgggacactcgagagcctccacatggagaacccttctgt
ttggcgagttacacctcggcgttccacagcgtgatgttcaacccggcggaacctcggctg
ctggccaccgccaactctaaagagggagtgggcctttgggacatccgcaagccacgcagt
tccctgttgcggtacggcgggagtctgtcgttgcagagcgccatgagcgtgcgcttcaac
agcacgggcactcagctgctggcactgcgcaggcgtctgccccccgtgctctacgagctg
cactcgcgcctgcccagcttccagttcgacaaccagggctactttaactcctgcaccatg
aagagctgctgcttcgcaggcgacagagaccagtacatcttgtctggatctgatgacttc
aacctttacatgtggaaaatcccgaaagaccctgaagcaggaggtccaggtcgtgtggtg
aacggggccttcatggttctgaagggtcatcgctccatcgtcaaccaggtccgcttcaac
cctcacacctacatgatctgctcctccggggtggagaaagtcatcaaggtgtggagtccg
taccagcaacccgacagcattggagacttggagggccgtgtggaggacaagtcccggagc
ctgtacacccacgaggagtacatcagcctggtgctgaacagcggcagcggcctgtcgcac
gactacgtcagccagtccatccaggaggacccgcgcatgatggccttcttcgactcgctg
gtgcgccgcgagatcgagggctggagctccgactcggacagcgacctgagcgagggcgcc
atcctgcagctgcacgctagggggcgccgttccacgcgctccaccaactcggcgacggcg
gtggtgaccgctgcggtgacggccgccacggctgctgttggagaggtcggcgggatgcgc
tcgcttccctcggcgggtatccttggggtcgccaatgatgatgacggcggtcacagcagt
agctcggagaatgcgtcactgctggtcgcccagttgtcagatgatgaggaggaagaggag
gaggaggaggaggaggaagtggaggaggagcaggagcaggcggacctggacggtgaggtt
ctcccgaggaggcggcggggtgctgtccgccggcgccgctcggccttcatgctggacctg
gccaacgacgactcggactcgagcagcttctggttcaacccggtgccgcggccacgctcg
cccagcccgccgctggaccgcaccgtcctcttcagcgagctgcgcacgccctcggcatcg
gactcttcctcctcgtcctcctcctccacctggagcccgacgtcctccagcagcgagggc
cagcatcagcatcagcagcagcagcagcagcagcagcagccaccacagcagccgccgcat
gaggaggaggacgaagaagagcatcagcagaggcgtcgctcggacacgcgtcagcgcaac
gcggctcgccggaggcgccgcagccgcatgcacctgcccagccgcgacgcggacgaccgg
ccggccaccgcgcaggacctctaccccacgcacgacccctgcagctaccccaagatcacc
attgacgatcccagctcctcttcctcgtcctcgggggagacgggatgcgccgacgcagag
gcgaggccgcggagccgcagaagcctccgtcaccgtggagacagccccacccggtcgcct
ggtaaccgtccggagactaggttcggaggacgagtgtcgtccagaagcccctcccctaca
gacagcgaactacggtgtatgatgctagcgggagtgaaggatgacaagaaacgagagaac
gagagcggaaggagagagagagcgggcaaggagggctttgctacatctcgtgtggacttg
ttggcctcggaagatcccacaaggaattccgaggatccccatcagaatctccctggaatt
tctggtacagcagaagagctagccgatgacccaacagactctaagacgcaggaaggaagc
gcaacattgagggtgaccaaacggactcgccgggggtcacaacttgaccccgagggatcg
tcactagggccagcagaggggtcagacgaaggggcgccctcagagaagaagctgaagact
tga

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