Alosa sapidissima (American shad): 121693050
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Entry
121693050 CDS
T11137
Symbol
pole2
Name
(RefSeq) DNA polymerase epsilon subunit 2
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03030
DNA replication
asad03410
Base excision repair
asad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121693050 (pole2)
03410 Base excision repair
121693050 (pole2)
03420 Nucleotide excision repair
121693050 (pole2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asad03032
]
121693050 (pole2)
03400 DNA repair and recombination proteins [BR:
asad03400
]
121693050 (pole2)
Enzymes [BR:
asad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121693050 (pole2)
DNA replication proteins [BR:
asad03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
121693050 (pole2)
DNA repair and recombination proteins [BR:
asad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
121693050 (pole2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Dpoe2NT
AAA_lid_PRS2_C
PUF_NOP9
BOF
Motif
Other DBs
NCBI-GeneID:
121693050
NCBI-ProteinID:
XP_041928136
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All DBs
Position
19:21336978..21343941
Genome browser
AA seq
527 aa
AA seq
DB search
MDVRKVKTKVSSGFKMRGLMLRPEASKYLLEVLESVSETDLNDVIERILDAVEKQPLSSS
MIELSVVETAVQDCSQSCDETIDNVFNIIGAFDVPRYIYSSERKKFVPLSMTTHPSPSLC
GVARDKAELFRERYTILQQRTHRHELFTPPVIGSAPEEGRNKFQLKTVEALLGSTSKLGE
VIVLGMVTQLKEGKYYLEDPSGTVQLDISKAQFHSGLYTESCFVLAEGWYEDSVFHVNAF
GFPPTEPSSTTRAYYGNMNFFGGPSTTSVKTSAKLKQLEEENEDAMFVIVSDLWLDNVEV
LEKIHTMFSGYSAMPPTCFIFCGNFSSAPYGRNQIKSLKESLKALADVICEYPNIHNSSR
FVFVPGPEDPGPSAILPRPPLAEHITEEFRQRVPFSVFTTNPCRIQYCSQEIVVIREDLV
NKMCRNCVRLPSGNLDIPNHFVKTILCQGHLSPLPLYVSPVYWSYDYALRVYPVPDVVVF
ADKYDPFNITNTDCLCINPGSFPRSGFTFKVYYPSNRTAEDSKLQGL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggatgtacggaaagtgaagaccaaagtttcttcggggttcaagatgcggggattaatg
ctgcgaccggaagccagcaagtatttattggaagtattggaatctgtgagtgagactgat
ctgaatgatgtcattgaacgcatactggatgctgtggaaaaacagccattatcttctagc
atgattgaactgtctgtcgtggagacagctgtgcaagactgcagtcagtcatgtgatgaa
actatagataatgttttcaacatcattggagccttcgatgttccaagatatatttacagt
tcagagaggaagaaatttgtacctctcagcatgaccacacatccatcacccagcctctgt
ggcgtggccagggacaaagctgagcttttcagggaacgctataccatcctacagcagcgc
actcacaggcatgaacttttcactcctcctgtgattggctcagctcctgaggagggcaga
aataagttccagctgaaaacggtggaagcactcttgggaagcacgtctaagctgggagaa
gtcattgtcttgggcatggtaacacaactgaaagagggcaaatattatcttgaagatcca
agtggcacagtacagctggacatatcgaaggcacagttccacagtggtctttacacagag
tcctgcttcgttcttgctgaaggatggtatgaggattcagttttccatgtaaatgctttt
ggatttccaccgactgaaccctcctccacaacaagagcttattatggaaacatgaacttt
tttggaggcccctccaccacctcagtcaaaacctctgccaagctgaaacaactggaggaa
gagaatgaagatgccatgtttgtcattgtgtctgacctgtggttggacaatgtagaggtc
ctggagaagattcacactatgttttcaggatattcagctatgcctcccacctgcttcatc
ttctgtggcaacttctcctctgcaccatatggaagaaaccaaatcaaatcactgaaagaa
tcattgaaagctcttgctgatgtgatctgtgaatatccaaacatccataacagtagtcgc
tttgtgtttgtccctgggcctgaagaccctggtcccagtgcaatcctgcctaggcctcca
ctggcggaacacatcacagaggagttcagacagcgagtgccgttctcagtgttcaccacc
aatccatgcagaatccagtactgtagccaggagatcgtagtgatcagagaagacttggta
aacaaaatgtgcaggaattgcgtgcgcctgccaagtggcaatctggatatcccaaaccat
tttgtgaagaccatcttgtgccaaggtcatctgagtcctttgccgttgtatgtcagccca
gtatactggtcgtatgactatgcgctgcgggtttaccctgttccagatgtcgttgtcttt
gctgacaaatatgaccccttcaacatcaccaacacagactgtctctgtattaatccggga
tcgtttcccagaagtggcttcacatttaaggtgtactacccctctaatcgaacagctgag
gacagcaaacttcaaggactgtag
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