Alosa sapidissima (American shad): 121693160
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Entry
121693160 CDS
T11137
Symbol
dctn1b
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04814
Motor proteins
asad05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121693160 (dctn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121693160 (dctn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121693160 (dctn1b)
03036 Chromosome and associated proteins [BR:
asad03036
]
121693160 (dctn1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121693160 (dctn1b)
Membrane trafficking [BR:
asad04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121693160 (dctn1b)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
121693160 (dctn1b)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
121693160 (dctn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
ATG17_like
Baculo_PEP_C
DUF7259
CGDB
Motif
Other DBs
NCBI-GeneID:
121693160
NCBI-ProteinID:
XP_041928324
LinkDB
All DBs
Position
19:complement(22507020..22541092)
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AA seq
1274 aa
AA seq
DB search
MSQTKRYTYSRTTSSGSSRMSSDGGGRPVKVGSMVEVIGKGHRGTVAYIGTTLFASGKWV
GVILDEPKGKNDGTVQGKRYFTCQENHGIFVRQSQIQLVDDGENTTSPETPEPATSKVPK
RDILDNSKSAKLRGAKPKKTPAPRKTTARRPKTTRPVGKMGSGSASAAEMSSSEPSTPAQ
TPLAAPVLPSPVGTLPSPGAPPIPAPSKGGITMATQEEEALRGQVKDLEEKLETLKLKRQ
EDKAKLKELEKHKIQLEQLQEWKSKMQEQQNELQKQLKEAKKEAKDALEAKERYMEEMSD
TADAIEMATLDKEMAEERAESLQLEVDSLKERVDELSMDLEILKHEIEEKGSDGAASSYH
VKQLEEQNARLKEALVRMRDLSASEKQEHVKLQRQTEKLNVDLDGLRGQRDKLTQELRGS
EKTVDELKEQVDAALGAEEMVEMLTERNLDLEEKVRELRETVSDLEAINEMNDELQENAR
ETELDLREQVDLATTKVREAEKRVEAAQETVADYQQTIQKYRELTAQLQEVNRDLMSQQE
AEQQQPAPADMFDFKIKFAETKAHAKAIEMELRQVEVTQANRHVSLLMAFMPESFLRHGG
DHDSLLVLLLIPRLICKAELVSKQAREKFDLTESSIEGVGMRGGPGEQRSFAAGLVYSLS
LLQATLHKYEQALNQCSVEVYKKIGVLYAELSAHERSLDFLIDLLHRDQLDETVNVEPLT
KAIKYYQHLYSIHLADQTEDCTMQLADHIKFTQSALDCMAVEVARLRAFLHPGQDEAGLT
VLLKDLETSCSDVRQFCKKIRRRMPGTDAHGIPSALSFGPQVSETLSECRKQLTWVVAVL
QEVAAAGAQLIGPLSEQEGLSAIKVEDMAFKAAEQIFGSQGINPHECLRQSCSVVIATMN
KMATAMQEGEYDAEKPQTGTPPVAIRAAALRAEFTDAEGRGLKLEDRETVIKELKKSLKI
KGEELSEASVRLSLLEKKLDSSSKDADERVEKIQTQLDETLAVLKKKEKEFEETMDALQA
DIDQLESEKAELKQRINSQSKMTIEGLRGSPNSGIASIVTGITGEEQKEAGVVYSPGVCP
GVGMQVVDSPLLMQQIAAQRLSIKHLKNENNRLKAERMRAQLAALPPLCVPRLPARGGSE
VQSGALYRKTQQLLETLLQMSANVRVVDITGKSPVSPGAQLLEQTARLQSLSETLDRLKD
EVAEHVVTQKPGARVSSDFATFPCTSFVKAKEERRGETVLVGRVMVPCTRGQETVHRLVL
SQPELHRVHRLLLT
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaccaaaagatacacgtatagcaggaccaccagtagtggcagcagtaggatg
agttcagatggtggtggtcgtccggtgaaggtgggctcgatggtggaggtgatcgggaag
ggtcaccgaggcaccgtagcctacatcggcaccacgctcttcgcctcgggcaagtgggtt
ggggtgatcctggacgagcccaagggcaagaacgacggcactgtgcagggcaagcgctac
ttcacgtgccaggaaaaccatggcatatttgtacgacaatcacagattcagttggtggat
gatggagagaacactacttcacctgagacccctgaacctgctacatctaaagtgccaaaa
agagacatattggacaactcgaagtcggctaaactgcgaggagccaaacccaagaagact
cctgccccccgtaagactacggccagacggcctaagaccactcgtccggtgggaaagatg
ggctcaggctctgcctctgcggcggagatgagcagcagtgagcctagcactccagctcaa
acgccattggctgcccctgttctcccctctcctgtggggacactcccctcgcctggagct
ccacccatccccgctcccagcaagggtggaatcaccatggcaacacaggaggaggaggcc
ctgcgtggccaggtgaaggacctggaggagaagctggagacgctgaagctgaagcgtcag
gaggacaaggccaagctgaaggagctggagaagcacaagatccagctggagcagctgcag
gagtggaagagcaagatgcaggagcagcagaacgagctgcagaagcagctcaaggaggcc
aagaaggaagccaaagatgctctcgaggctaaggagcgctacatggaggagatgtcagac
acagcagacgccatcgagatggccaccctggacaaggagatggccgaggagagggccgag
tcccttcagctggaggtggactcactcaaggagagggtggatgagctgagtatggacctg
gagatccttaagcacgagatcgaggagaaaggttcagatggagctgcctccagttatcac
gtcaaacagttagaggagcagaatgcaagactaaaagaggcactggtcaggatgcgtgac
ctgtcggcctcggagaagcaggagcacgttaagctgcagcggcagacggagaagctgaac
gtggacctggacgggctgcgcggccagagagacaaactcacacaggagctccgcggctca
gagaaaaccgtcgacgagctgaaggagcaggtggatgctgctttgggtgcagaggagatg
gttgagatgttgactgagaggaatcttgacctggaagagaaagtgagagagctgagagag
accgtcagtgacctggaagccattaatgagatgaacgacgagctccaggagaatgcccgg
gagacggagctggacctgcgggagcaggtggacctggcgaccaccaaggtccgcgaggcg
gagaaacgcgtggaggcggcgcaggagaccgtggccgactaccagcagaccatccagaag
taccgcgagctcaccgctcaactgcaggaagtgaaccgtgatttgatgagccagcaggag
gcggagcagcagcagcctgcacctgcagacatgttcgacttcaagatcaaatttgctgaa
accaaagcccacgctaaggccatagagatggagctgcggcaggtggaggtgacacaggct
aaccggcacgtgtctctgctcatggccttcatgcccgagtccttcctgcggcacggtgga
gaccacgactccctgctggtgctgctgctcatccccaggctcatctgcaaggctgagcta
gtgagtaagcaggcgcgggagaagtttgacctgacggagagcagcatagagggggtgggc
atgagaggaggtcctggggaacagaggagcttcgccgccggactcgtctactccctcagc
ctgctgcaggccaccctgcacaaatacgaacaagctctgaatcagtgcagtgtggaggtg
tataagaagattggagtgctgtacgctgagctgagtgcccacgagcgctcgctggacttc
ctcattgacctcctgcacagagaccagcttgatgagacggtcaacgtagagcccctcacc
aaagccatcaagtactaccagcatctgtatagtatacatctggcagaccagacagaggac
tgcactatgcaactggcagaccacattaagtttacccagagtgcattagactgcatggct
gtggaggtggcacggttgcgggccttcctgcatcctggacaggatgaggcagggcttact
gtcttgctgaaggacctggagacttcgtgttcggatgtgaggcagttctgcaagaagatt
cgccgccgcatgccaggcacagatgcccacggcatcccatcagccctcagctttggccca
caggtgtcagagacactgtctgagtgcaggaagcagttgacctgggtggtggccgtgcta
caggaagtagcagcagcaggcgcacagctgattggtccccttagcgaacaggaagggctc
tccgctatcaaagtggaggatatggccttcaaagcagcagagcagatctttggaagtcag
ggaataaacccacatgagtgtctgcgccagtcatgcagcgttgttatagcaaccatgaac
aaaatggccacggccatgcaggagggagagtacgatgctgagaaaccacagactgggaca
ccacccgtagctatacgtgctgccgctctgagggcggagtttactgatgctgagggccgt
ggcctgaagctggaggacagagagacggtcattaaggagctgaagaaatcactcaagatc
aagggagaggaactgagcgaggcgagtgttcgtcttagtttgctggagaagaagctggac
agctcgtctaaagacgcggacgagcgtgtggagaagatccagactcaactggacgagaca
ctcgctgtgctgaaaaagaaagagaaggagtttgaagagaccatggatgctctgcaggct
gacattgaccagctggagtcagaaaaggcggagctaaaacagcgcatcaacagccaatca
aagatgaccattgaggggttgagaggaagtcccaactctggcatcgcctctattgtcact
ggcatcacaggagaggaacagaaagaggctggagttgtctattccccgggtgtgtgtcca
ggcgttggaatgcaggtggttgactctcctctgctgatgcagcagatcgccgctcagaga
ctcagtattaagcatctaaagaatgagaacaacagactcaaggcggagaggatgcgtgcc
cagcttgcggcgctgccccccctgtgtgtgccccgtctgccagcgcgggggggcagtgag
gtccagtcaggggcgctctaccgcaagacccagcagctgctggagacactgctgcagatg
agcgccaacgtcagggtggtggacatcaccggcaagtcaccagtaagcccaggtgcccag
ttgttagagcagacagccagactacagtccttgagtgaaactctagaccgtctgaaggat
gaggtagctgagcatgtggtgactcagaagcctggggcgcgtgtctcatctgactttgcc
actttcccttgcacctccttcgtgaaggctaaggaggagaggagaggtgagactgttctg
gttggtcgagtgatggttccgtgtacccgaggccaggagacagtgcaccgccttgtccta
tcacagcctgagttacacagagttcaccgcctacttctgacttag
DBGET
integrated database retrieval system
