Alosa sapidissima (American shad): 121693192
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Entry
121693192 CDS
T11137
Symbol
si:dkey-33c12.3
Name
(RefSeq) alpha-internexin
KO
K04572
neurofilament light polypeptide
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asad01009
]
121693192 (si:dkey-33c12.3)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121693192 (si:dkey-33c12.3)
Protein phosphatases and associated proteins [BR:
asad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121693192 (si:dkey-33c12.3)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
121693192 (si:dkey-33c12.3)
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Gene cluster
GFIT
Motif
Pfam:
Filament
ATG17_like
Filament_head
Golgin_A5
BLOC1_2
Snapin_Pallidin
HMMR_N
Baculo_PEP_C
DUF1664
TPR_MLP1_2
Phage_GP20
Fib_alpha
AAA_13
Motif
Other DBs
NCBI-GeneID:
121693192
NCBI-ProteinID:
XP_041928408
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Position
19:22653018..22657730
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AA seq
400 aa
AA seq
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MSYDLFLPPSLSRRLRDDSSPRVSSSSSRLHRPSHSSFSSALQRRGAPRCERSVPPERCD
LVQASVLSGELRDTRSQEREQLVDLNNRFACYIERVRELEQHNRALLGQLEALRRGLGDP
SRVPRLYEEEARALRAQVEEEALEKSRVEAQRERAREELARLRERWEEEAERRARAEETL
RRAREEAGRAALGNCDAEASLVSLVMEAGFLKKVFAEEEAGLRAELQALAAGRDAVRAPV
GGADLSGALREIRGQYERLASRNTAAAEEWFRGKMAAAAEVVQRNEEAVRSVRAETAEYR
QQLQARSAELEVLRSAIDSLNSQLAELEDEQGKEVAKYQGRIIDLERDIGDAKEEMSRYL
REYQDLLNVKMALDIEIAAYRKLLEGEEIRLTFSALPALA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgacctgtttcttcctccttctctttcccggcgcttgagggacgactcctcg
cctcgcgtctcctcctcctcctcccggctccaccggccctcacactcctccttctcctct
gcgctccagaggagaggggccccgcgctgcgagcggagtgtgccaccggaacgctgcgac
ctggtacaggccagcgttctgagcggcgagctccgggacacgcggtcccaggagcgcgag
cagctggtggacctcaacaaccgattcgcctgctacatcgagcgtgtgcgggagttggag
cagcacaaccgggccctcctaggccaactggaggccctgcggcgcggccttggcgacccc
tcacgtgtgccacggctgtacgaggaggaggcgcgggcactgcgggcccaggtggaggag
gaggccctggagaagtcgcgcgtggaggcgcagagggagcgcgcacgggaagagctggcg
aggctccgggagcgctgggaggaggaggccgagaggagagcccgggctgaggagacactc
cggagggcccgcgaggaggccggcagggctgcactgggcaactgtgatgcagaggccagc
ctggtctccctggtgatggaggcggggttcttgaagaaggtgttcgccgaggaggaggcc
gggctgagggccgagctgcaggcgctggcggccgggcgggacgcggtccgggcgccagtg
ggtggcgccgacctctccggggcgctgcgggagatccggggccagtacgagcgcctggcc
agccggaacacggcagcggccgaggagtggttccgggggaagatggcggcggcggcggag
gtggtgcagcggaacgaggaggcggtgcgctcggtgcgggccgagaccgcagagtaccgg
cagcagctgcaggcacgctcagctgaactggaggtgctgcgcagcgccatcgactccctc
aactcgcaactcgccgagctggaggatgagcagggcaaggaggtcgccaagtaccagggg
aggataatagatttggagcgagacattggtgatgcgaaagaggagatgtcacggtacctg
cgggaataccaggacctcctgaatgtgaagatggctctggacatcgagattgctgcatac
aggaaactactggaaggagaggagattcgactgaccttctctgcccttccggctcttgct
taa
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