Alosa sapidissima (American shad): 121693331
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Entry
121693331 CDS
T11137
Symbol
srp54
Name
(RefSeq) signal recognition particle 54 kDa protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03060
Protein export
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
121693331 (srp54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
asad02044
]
121693331 (srp54)
Enzymes [BR:
asad01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
121693331 (srp54)
Secretion system [BR:
asad02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
121693331 (srp54)
Eukaryotic Sec-SRP protein
121693331 (srp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
nSTAND3
DUF2209
AAA_33
NPHP3_N
AAA_17
ResIII
AAA
AAA_22
nSTAND_NTPase5
AAA_30
AAA_19
MeaB
APS_kinase
MobB
Zeta_toxin
PduV-EutP
MMR_HSR1
nSTAND_NTPase7
6PF2K
AAA_16
ATP_bind_1
Thymidylate_kin
AAA_18
Torsin
Motif
Other DBs
NCBI-GeneID:
121693331
NCBI-ProteinID:
XP_041928623
LinkDB
All DBs
Position
19:19998732..20005252
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AA seq
504 aa
AA seq
DB search
MVLADLGRKITSALRSLSNATIINEEVLNAMLKDVCAALLEADVNIRLVKTLRENVKAAI
DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK
VENFEIIIVDTSGRHKQEDSLFEEMLQVANAVQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDLEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKQPNRIQRVARGAGVATRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtgttggccgacttgggcagaaagataacctcggcgctgaggtctcttagcaatgcc
accataatcaacgaggaggttctaaatgctatgttaaaagatgtatgtgctgctttactg
gaagctgatgtaaacatcaggctagttaagacgctcagagaaaatgtcaaagctgccatc
gacctggaggaaatggcctctggtttgaacaagagacgaatgattcagcatgccgttttt
aaagagcttgttaagcttgtggatcctggagtcaaggcctggacaccaacaaagggaaaa
aacaacgtcatcatgtttgtaggccttcagggcagtgggaaaactacaacatgttcaaag
ctggcatattactaccaaagaaaaggatggaaaacatgtctgatctgtgccgacacattc
agagcaggtgcctttgaccagttgaagcagaatgctacaaaagccagaattcctttctat
gggagctacacagagatggatccagttgtcatagctgctgagggtgtcgagaaattcaag
gttgagaactttgaaatcatcattgtagacacaagcggccgacataaacaggaggactct
ctctttgaggagatgttgcaagtcgccaatgctgtgcaaccggataatattgtgtacgtg
atggatgcctccatcggtcaggcttgcgaggcccaagccaaagctttcaaagataaggta
gatgtggcatctgtgattgtgacaaagttggacggtcatgccaaaggaggtggtgcgctt
agtgctgtggcagctacgaagagtcccatcattttcattggaactggagagcatattgat
gacttggaacctttcaaaacgcaaccttttatcagtaaacttttgggtatgggagacatt
gagggtttgatagacaaagtgaatgagctgaagctggatgacaatgaagagctcattgac
aaacttaaacacggtcagtttacccttagagacatgtatgaacagttccagaacatcatg
aagatgggtccctttggacagattatgggcatgattccaggatttggaactgatttcatg
agcaaaggtaatgagcaagagtccatggccaggttaaagaagctgatgaccatcatggac
agcatgaatgaccaagagctggacaacaaagatggtgccaagcttttcagcaaacagccc
aacagaattcagagggttgcccgtggtgcaggtgtagccaccagagatgttcaggagctg
ctcacccaatacactaagtttgcccagatggtgaaaaagatgggtggcatcaaaggcttg
ttcaaaggtggtgatatgtccaagaatgtcaacccatcacagatggcaaagttgaaccaa
cagatggccaagatgatggatcccagagttctgcaccacatgggtggtatggcaggattg
cagtccatgatgcggcagtttcagcaaggtgcggctggcaacatgaaaggaatgatggga
ttcaacaacatgtga
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