Alosa sapidissima (American shad): 121693397
Help
Entry
121693397 CDS
T11137
Name
(RefSeq) left-right determination factor 2-like
KO
K04668
left-right determination factor
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121693397
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
asad04052
]
121693397
Cytokines and neuropeptides [BR:
asad04052
]
Cytokines
Transforming growth factors (RSTK binding)
121693397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
CBM96
Motif
Other DBs
NCBI-GeneID:
121693397
NCBI-ProteinID:
XP_041928726
LinkDB
All DBs
Position
19:25638373..25639894
Genome browser
AA seq
351 aa
AA seq
DB search
MFLFLASLLSYTVGFTEEDMRDAMLQKLGLTELPRIQKRDLENVVVPAHIKNKYLSMLKL
HNKRRRRSVPSLAGILRGVHGSADISGEVMYSDTTRQRLSFGMDSRIPENSEVTMAELKL
YKTSRKMPILQKKSNRPIKNARVSIYWVETLANAKNRTSLVDSRLVPIHESGWISFDVTQ
AVQYWSKTERKTPLHLEVWIEGERPGTHAAEMARTVRFATEDPSSASTSKPELVLFTLDL
EEFGSRGDCKSGKGNGMCCREEHFINFREMSLTQYWIIEPVGYQAFRCAGGCKQPKRSYA
YGQRTCAVVESAPLPIMYLVKRGNHTEIEVAEFPNMIVEKCGCTMDNGSMA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgttcctcgcctctctcttgtcctacactgtgggttttacagaagaagacatg
agagatgccatgctgcagaaactcggcctcacggaactcccaaggatccagaagagggat
ttggagaatgttgttgttccggctcacatcaagaacaagtacctctccatgcttaagctc
cacaacaaacgcaggcgtcggtctgttcccagcctggctgggattctgcgtggcgttcat
ggaagcgcagacatttctggagaggtcatgtactcggacacgacacgacagcgcctttcc
tttggcatggacagcagaattccagagaacagtgaggtcaccatggccgaactgaaactg
tacaaaacgtcgcgcaaaatgcccattctgcagaagaagagcaacagaccaatcaaaaac
gcccgtgtgagcatctactgggttgaaactctggcgaatgccaaaaacaggacttcactt
gtagactcaaggttggtaccaattcacgagtctggatggataagctttgatgtgacgcaa
gcagttcagtactggtctaaaactgagcgtaaaactccattgcacctggaagtgtggatc
gaaggtgaaaggcctggcacccacgctgcagagatggcgcggactgtgcgctttgctact
gaagatccctccagcgccagcactagcaaaccagaactagtcctgttcaccctggacttg
gaagaatttgggtctagaggagactgcaaatctggcaaaggaaacggcatgtgctgcaga
gaggagcacttcatcaacttccgagagatgagcttgacgcagtactggatcattgaaccc
gtcgggtaccaggccttccgatgcgccgggggatgcaagcagcccaagcgcagttatgca
tacggacagcggacgtgcgcggtcgtggaaagcgcgccactgcccatcatgtaccttgtg
aagagaggaaaccatacagaaatcgaggtggccgaatttccgaacatgatcgtggagaaa
tgcggatgcaccatggacaatggctctatggcatag
DBGET
integrated database retrieval system
