Alosa sapidissima (American shad): 121693455
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Entry
121693455 CDS
T11137
Symbol
zeb1a
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121693455 (zeb1a)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
121693455 (zeb1a)
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121693455
NCBI-ProteinID:
XP_041928807
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Position
19:complement(29691939..29719447)
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AA seq
1223 aa
AA seq
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MAEGPRCKRRKQANPRRNGVSNLSNAETGSDSDDEDRLHIAEDDALSSIPPSPGGTNGTA
NGLVTVKQECCSGEEDDGEGEELIQRGETPSNDENGSPDSFSQLLTCPYCSRGYKRHTSL
KEHVKLRHEKNDDNYSCTQCSYTFSQKAQLERHMSAHKHGRDQRVLSQSGGSRKFKCSEC
SKAFKYKHHLKEHLRIHSGEKPYECSNCKKRFSHSGSYSSHISSKKCVPPSVTPTNGLQR
PIGAAKPNQTTPPKPQPPPPTRLLLREKVEVGPTQEQRPIKQLKTEPAEVESKPVVTVTG
GVAPPPSQQGVVQTLVLPTMGLVQPISINLSDLQSALKLAVDRGGAVVRQVLAGGAANGM
GATKVIGQGPGGPRTQTLLVQNPQNPQLLSAISLPMLEHDGTTKIIINYGATHASMAPAP
AQTGTAQTAQTGTGQTSSGAPGQTLVQTGPVQTSTGQTGPVKTGTSQVGTGPTVPAKPSP
TPVSASVPSAAPSGPAQSGAAKPASVTVVPLSQSSATGTQAQAQAAPLQIRPSQSGLVQL
SLVQTSPGQGPVVRPTLAQLAPALTGPAKLLLAQTTGTRTATRLVRIIPAPVPAPQGPLQ
NAAKPKPPEPEPQGDSTASEPQNNNTTEPQNPALVVQVKVEPGEPEGDEPADGQKQAEEE
EEEEEEEGTSAQCPLCDDGFPDPLRELQSCLRDDGPAGSGGVSLRSLLALLKAYSAASSP
SEEQLSGAASEARLPLPVVRRWFSRMRTAGQDTHTHAHTHTRSRSRTRSADTLATHITHI
THKRAHAHTTHTDSTREKHTANTPTMLTSAPTADPQAISLASPSQDPPPCSEPQDCGPTL
SSSPGLSATRAPLPSPAAPASPLDLSAAGLLIVKTELDSEGESQAEPLDLSLPRSALLQA
NANANASASMQQEPLNLSRIKKEEEPATVLSPSNHDNNNNNRVTTLAVATTAAAPVATTT
TTIYLSPQTVAPLNIALATRLVAIAEPRAVPCLPSGVVTAAANQKRTILIPQLTYTYTPS
NTHNTVILNGDQEDRADSASGVSVGEEPNDTDSTPSPKKRRVQAGQYACDLCDKIFQKSS
SLLRHKYEHTGKRPHECAVCRKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQ
HMNHRYSYCHRDASSQPLTHTGTLAEARGSEEEEDEDEEEGEAISLDDIRVVRVGEEDGS
EGWGEEEEGEMEGEEDGEVEEGE
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggacccaggtgcaaacggcgaaagcaagcgaatccgcggcggaacggtgtg
agtaacttgagtaatgcagagactggctcagactcggatgatgaggaccggctccatatt
gcggaggatgacgccctgtccagcatccctccatctcctgggggcaccaatggcaccgcc
aacggcctagtcaccgtgaaacaggagtgctgctctggagaagaagatgacggagagggg
gaggagctaatccaaagaggagagacacccagcaatgacgagaatggatctccagactcg
ttctcccagctgctcacatgcccgtactgttcccgtggttacaagcgtcacacctcgctg
aaggagcatgtgaaactccgtcacgagaagaacgatgataactacagctgcacacaatgt
tcctacaccttcagtcagaaagcacagcttgaacgtcatatgagtgctcacaaacacggc
agagaccagcgtgtgttaagccagtcaggtggaagcaggaagtttaagtgttccgagtgt
tccaaggcctttaagtacaagcatcacctcaaggagcatctacgcatccacagcggagaa
aagccctatgagtgctctaactgtaagaagcgcttctcccactctggctcttactcctcc
cacatcagcagtaagaaatgcgtcccgccctccgtaacccccaccaacggcctccaacgg
ccaataggagctgccaaacccaaccagaccacaccccctaaaccccagcccccgccccca
acccgtctgcttctcagggagaaggtagaggtgggaccgacgcaggaacagcggccaatc
aaacagctcaaaacagaaccagccgaggtggagagcaaacccgttgtcacggtgacgggg
ggcgtggcccctcccccttctcaacagggcgtggtccagactttggtcctgcccaccatg
ggactggttcagccaatcagcatcaacctgagcgacctgcagagcgcgctgaagctggcg
gtggacagagggggcgccgtggtgaggcaggtgctcgcgggcggcgccgctaatggcatg
ggcgccacaaaggtcataggtcaggggcctggggggccgcgcacacagacgcttctggtg
cagaacccccagaatcctcagctgctgtcggccatctcactgcccatgttggagcatgac
ggcaccaccaagatcatcatcaactacggcgccactcacgccagcatggcaccggcccca
gcgcagacgggcacagcccaaactgctcagactggcacgggtcaaacaagctctggagca
ccgggtcagactttagttcaaactggtccagtgcaaaccagcacgggccaaactggtcca
gttaagactggcacaagtcaagtgggcacaggtccgactgtgcccgctaagccgagccca
actccagtcagtgccagcgtgcccagtgctgccccgtcgggccctgcccagtctggtgcg
gcaaaacccgcctctgtgacggtggttccactgagccagtccagcgccaccggaacccag
gcccaggcccaggcggcaccgctccagatccggccctctcagtcgggcctggtgcagctc
agcctggtccaaaccagcccaggacaaggccctgtggtccgacccaccttggcccagcta
gctccagcgctgaccggtccagcaaagctgctcttggcccagacgacggggaccagaacc
gctaccaggctggtgcggatcattccagctccggttccagctccgcaaggacccctccag
aacgccgccaagcccaaacccccagaaccagaaccgcagggggacagcaccgcctcggaa
ccgcagaacaacaacaccactgaaccgcagaacccagcgctggtggtgcaggtcaaagtg
gaaccgggggagcctgagggcgacgagccggcagacggacagaagcaagcagaggaggag
gaggaggaagaggaggaggaggggacctcggcacagtgccctctgtgtgatgacggcttc
cccgacccgctgcgtgagctccagagctgtctccgtgacgacggcccggcggggtcaggg
ggcgtgtctctgcggagtctcctggctctcctgaaggcgtacagcgcggcgagcagcccc
agcgaagagcagctgagtggggccgccagcgaggcccggctgcccctccccgtggtgcgc
cgctggttctcccgcatgaggaccgccgggcaggacacacacacacacgcccacacacac
acgcgctcgcgctcacgcacacgcagcgcagacacactcgccacacacatcacacacatc
acacacaaacgtgctcacgcacacacgacacacaccgactccacacgtgagaaacacact
gcaaacacacccacgatgctcaccagcgcccccacagcagacccacaggcgatatccctg
gccagccccagtcaggacccccctccgtgctcggaaccccaggactgtgggcctactctg
agctccagccccggcctgagcgccacgcgtgcccccctgccctcgccagccgcgcccgca
tctccgctggacctgtcggccgcagggctgctcatcgtcaagacggagctggactcggaa
ggcgagagccaggccgagccgctggacctttccctgccgcgctccgcgctcctccaggct
aatgctaacgctaatgctagtgctagcatgcagcaggagccgctcaaccttagccgcatc
aagaaggaagaggagcctgccacagtgctgtcacccagcaaccacgacaacaacaacaat
aaccgtgttacaactcttgctgtggcgacgaccgctgctgccccggtcgccacaacaaca
acaaccatctacttgagtccacagacggtggcaccgctcaatatcgccttggcaacgcgg
ctggtggccatcgccgaacctagggccgtcccatgcctaccgtctggtgttgtcacggcg
gcagccaatcagaagcgcaccattctcatccctcagttgacgtacacctacacacccagc
aacacgcataacaccgtcatccttaacggagaccaggaagacagagcagactctgcctct
ggtgtgtcagtaggggaggagccaaatgacacagactccaccccttcccccaaaaagagg
cgtgtccaggctgggcagtacgcatgtgatctgtgcgacaagatctttcagaagagcagt
tcactcctgaggcacaaatatgaacacacaggtaaacgtcctcatgagtgtgctgtgtgc
agaaaggccttcaaacacaagcaccacctgatcgagcactcgcgcctgcactctggggag
aagccgtaccagtgcgacaagtgcggcaagcgcttctcccactccggctcctattcccag
cacatgaaccaccgctactcgtactgccatcgagacgcatcctcccagcccctcacacac
acaggcacgctagcggaggcccgtggcagcgaggaagaggaggatgaggacgaggaggaa
ggagaggctatcagcctggacgacatcagagtggtacgcgtgggggaagaggatgggagc
gaggggtggggggaggaggaggagggagagatggagggagaggaggatggagaagtggag
gagggagaa
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integrated database retrieval system
