Alosa sapidissima (American shad): 121693496
Help
Entry
121693496 CDS
T11137
Symbol
tonsl
Name
(RefSeq) tonsoku-like protein isoform X1
KO
K09257
NF-kappa-B inhibitor-like protein 2
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121693496 (tonsl)
03400 DNA repair and recombination proteins [BR:
asad03400
]
121693496 (tonsl)
Transcription factors [BR:
asad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
121693496 (tonsl)
DNA repair and recombination proteins [BR:
asad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121693496 (tonsl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
TPR_12
Ank_5
TPR_1
Ank_3
TPR_8
TPR_7
LRR_4
LRR_At5g56370
RPN7
SNAP
Ank_KRIT1
ANAPC3
Motif
Other DBs
NCBI-GeneID:
121693496
NCBI-ProteinID:
XP_041928874
LinkDB
All DBs
Position
19:8573529..8595350
Genome browser
AA seq
1445 aa
AA seq
DB search
MTFSREIKHLQKAKNKAQSNHNLREEASLCNQLGELLARNGDYKTAIEEHRRELALSEAL
GDVIGSAVANRKIGECFAEMGNTDLALKHQRRHLKLACSVNDAVEEQRALATIGRTYLFR
YESDQSQDSLGQAEEAFRKSLTIVDDRLEGVLPARELSEMKARLFHNLGCVYDHLKDPQR
CSEYIRRSVFIAEKNNFLEDLQRANSLMGRIHFRNSQHSRAMRCLEQAKECARKMKDKFG
ESECFCSIAEIQLSLGDFVAARRSLKKAFTLGSQHAADREAVKKALKQAIRGVHLEEAVA
ELKDGQTHEAMGLAEQLGDLYSKLGCFNKALDSYLTQLSCGKTLGKSPRELAVIHVSLAV
TYTDLRQHHKAIEHYRQELALRQGNPKEECKTWLNIAGCQEEAEAAVDELDISYASALRC
AEKEGMSLRSLQKRVLRQWLAVQQRFGSQHSSDTRRRLDDLCAATGLNPDASDGEEEEEE
GEENSEPLEDSDIQFSDSDDEEYDKMLSGRRKLGRWNRRNEKGETCLHRACIDGNLRQVQ
LLLEQGHPVNPRDYCGWTPLHEAANHGHEEIVAVMLERGANINDPGGPMCDGVTPLHDAL
SCGHFAVARLLVERGASVNMRNAKGDTALDSLRQWFKTYSRELDSDARQECAVTEKLLRR
AMAGGVPTAAVTPKPQALLLNSQLFDAENSEPLMSSQRSPPRPVSSQESPAAPRSTQRRP
PASTGRRHRGTEDAILFGLESSCSDQSDSDDPISPLRPIRPRLRFPAAPSAPDTPPQQEA
VSAHMSREPTAAAMSTSASTAPSRTEEYRLAMKSLGSATTRLFSQSLSEPAFSSTPASDR
TALVPEEEYLADDWLEDDLGEMQPKKKRKMASELEGRRENGEPLSRTSASASVSHTASYS
AFASASSETSSSRVRTSSNRGLSMKKGQAKARQVKMTQLSGMVMLGRREVSRSPSPTITQ
DDDPMQFTAMHQHSVPVRAPAVAAPMPAPIRMRVRVQDNVFLIPVPHRGSPLYSTADSCT
VSWLCEQAAQRYYQTCGLLPRLSLQKEGALLAPQDPLLAVLHTNEEVVAKVCSWDLPPLP
ERYQKACRSLAVDESVRVLRLCEAQDGSSSVSVCGLSLASTALAPLLRALKLQASLTELR
LAANRLGDGLLPELVAAVATMPRLRLLDVSANLITGEGLKKAANSLDGKSQPTFPCLEEL
NLSMNPLGDGHTQALACLLSACPLLATLSLQGCSLTARFLQQHRLLLASALTGTGHLRTM
TLSHNSLGSTGFELVLKTLPLHLLSHLHLTAVCRGPADQPALELLATHLAQNDCSLTHLS
LASNGLSDHSVASLARCLPVCPSLVSLDLSANPDVTSAGLHSLLMALREARRPLVQLNLQ
GCQVAGPWNTICLDDLAKNVRDLSLCSQRLNKLDQQALQQSWHLQGSGRTLLRQSKCMMS
TTGPI
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgactttttcacgggagatcaaacatttacagaaggccaaaaacaaagcgcagagtaac
cacaatttgagggaagaggccagtctttgcaatcagcttggagaattattggccagaaat
ggagattacaaaactgctattgaggaacatagacgagagctggccctctctgaggctctg
ggagacgttattggctcagcagtggctaatcggaagattggagaatgttttgctgagatg
ggaaacactgatttggctctcaagcatcaaaggcggcacctgaaactggcatgctctgtc
aatgatgcagtagaggaacagagagccctggccaccattggccggacctacctctttcgt
tacgaatcggaccaatcacaggacagcttgggccaagcggaagaggcattcagaaagagt
ctgaccatagtagacgatcgcctagaaggtgtgttgccagcacgggagctgagtgaaatg
aaggcgcgtctcttccacaacctgggctgcgtttacgaccacctgaaggatccgcagcgc
tgcagcgagtacatccgccgcagcgtcttcatcgcagagaagaacaatttcttggaggat
ctgcagagagcaaactccctgatgggaaggatccattttcgcaatagccagcactcccgt
gccatgcgctgtctggagcaggccaaggaatgtgcgcgcaagatgaaggacaagtttgga
gagagcgagtgtttctgtagtattgcagagatccaactttctttaggggactttgtggct
gctcgccgctcgctgaaaaaggcctttaccttggggtcacaacatgctgctgatcgggaa
gctgtgaagaaggctctaaaacaggccattcgaggtgtccacctggaggaggccgtagct
gagctgaaggacgggcagacccatgaggccatggggctggctgaacaactgggagatttg
tactccaaactgggttgctttaacaaagcgctggactcctacctcacgcagctttcctgt
ggtaagactctgggtaaatctcctcgggagctggcggtgattcacgtctctctggctgtt
acctacacggatctgcggcagcaccacaaggccattgagcactacaggcaggagctggca
ctgagacagggcaaccccaaagaggagtgtaagacatggttgaacatagcggggtgtcag
gaggaggcagaggctgctgtggatgagctggacatcagctacgcgtctgctctgcgctgc
gctgagaaagaagggatgtctttgaggtcactacagaaacgtgtactgcgccagtggcta
gctgtccaacaacgcttcggctcgcagcactccagtgacacgcgccgcaggctggacgat
ctctgcgccgccacaggactgaatcctgatgccagcgacggagaggaggaagaggaggag
ggcgaggagaacagcgagcctctggaggacagtgacatccagttctcagactctgatgat
gaagaatatgacaaaatgttgtctgggcggaggaagcttggccggtggaaccggcggaat
gagaagggggagacgtgtctgcacagggcctgcattgacgggaatctacgacaggtgcag
ctcctgctagaacaggggcaccctgtcaatcccagagactactgcggatggactcctctt
cacgaggctgccaaccatggccatgaagagatcgtggctgtgatgctggagcgtggggcc
aacatcaacgaccccggcggccccatgtgtgacggggtcaccccgctgcacgatgccctg
agctgcgggcacttcgctgtggcccgtctgctggtggagagaggggcctctgtgaacatg
cgcaatgccaagggggacacagcgctggacagccttcgtcagtggtttaagacgtacagt
cgggagctggactctgacgccaggcaggagtgtgctgttactgagaaactgctgaggaga
gccatggcaggaggagttccgactgctgcagtcactccaaagccccaggctcttctgttg
aacagtcagctgtttgatgctgagaactctgagccgctcatgtcctcccagcggtccccg
ccccggcccgtcagctctcaggagagtcctgctgccccgcgcagtacccagcggagacca
ccggccagcacgggccgccgccaccgagggacggaggacgccatcctgttcgggttggag
agcagttgctcggatcagagtgactccgatgaccccatcagccccctgcggcccatccga
cccagactacgtttcccagcagccccgtcggccccagacactcctcctcaacaggaggct
gtgtcagcgcacatgtccagggagccgacggcggcggccatgtccacatccgcgtccact
gccccatctaggacagaggagtaccggctggccatgaagagcctgggcagtgccaccacc
cgcctcttctcccagagcctgtccgagcccgcgttcagcagcacgccggccagcgaccgg
acagccctggtccccgaggaggagtacttggccgacgactggctggaggacgacctgggc
gagatgcagcccaagaagaagaggaagatggcgtctgagctggagggcaggagagagaac
ggcgagcctctaagccgtacttcggcctcggcctctgtctcccacacagcctcttactcc
gccttcgcctcggcctcatctgagacatcctcatccagggtacgcacctcctccaatagg
ggtctctcgatgaagaagggccaggctaaggcgaggcaggtgaagatgacccagctctct
ggcatggtgatgctgggccgcagagaggtcagtaggtcacccagccccaccatcacccag
gacgacgaccccatgcagttcacggctatgcaccagcacagtgtgcctgtaagggcccca
gccgttgctgccccgatgcctgcacctatcaggatgagggtcagagttcaggacaacgtc
tttctcattccagttccacacagaggctctcctctctacagcacggccgactcctgcacc
gtgtcttggctgtgcgagcaggcagcccaacgctactaccagacctgtggcctcctgcca
cgcctctcgctgcagaaagagggcgctctgcttgcaccgcaggatcccctcctggctgtc
ctgcacaccaacgaggaggttgttgccaaagtgtgttcctgggacctgccccctctgcct
gagcgctaccagaaggcctgccgcagcctggctgtggacgagagtgtgcgtgtgttgcgt
ctgtgcgaggcgcaggacggcagctcctcggtgagcgtgtgtggactcagcctggcctcg
acggccctggcccccctgctgcgcgccctcaagctccaggccagtctgacggagctgcgg
ctcgccgccaatcgcctcggtgacggcctcctccctgagctggtggccgccgtggccact
atgcccaggctccgcctgctggatgtgtcggccaatctgatcaccggagaagggctcaag
aaggctgctaattcgctggatgggaagagtcagcccaccttcccatgcctggaggagctg
aacctcagtatgaacccactgggcgatggacacacccaggctctggcctgcctactgtca
gcatgccccctgctggccactctgtccttgcagggctgcagcctcaccgcacgcttcctg
cagcaacaccgcctcctgctggccagcgccctgaccggcactgggcacctgaggactatg
acgctatcccataactccctgggctccacgggctttgagctggtgttgaagacgctaccc
ctccacctcctctcccatctccacctgaccgctgtgtgccgcgggccagctgaccagcca
gctctggagctccttgccacgcatctcgctcagaacgactgctcacttacccacctcagt
ctggccagcaatggattgtctgaccacagtgttgcctccctggccagatgcttgcctgtc
tgtccctcactggtgtccttggacctgtcggccaacccggacgtgacgtccgctggtctt
cacagtcttctgatggctctgcgggaggcccggcggcccctggtccagctcaacctccag
gggtgtcaggttgctggtccctggaatactatttgcttggatgaccttgccaaaaacgtc
cgggacttgtctctttgctcccagaggctcaacaagctggaccagcaggccttgcagcag
agctggcatttgcaggggagtggccgaacgcttctccgtcagtccaagtgcatgatgagc
acgaccggacccatatga
DBGET
integrated database retrieval system