KEGG   Alosa sapidissima (American shad): 121693519
Entry
121693519         CDS       T11137                                 
Name
(RefSeq) calpain-1 catalytic subunit-like
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad04141  Protein processing in endoplasmic reticulum
asad04210  Apoptosis
asad04217  Necroptosis
asad04218  Cellular senescence
asad04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:asad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121693519
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    121693519
   04217 Necroptosis
    121693519
   04218 Cellular senescence
    121693519
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    121693519
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:asad01002]
    121693519
Enzymes [BR:asad01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     121693519
Peptidases and inhibitors [BR:asad01002]
 Cysteine peptidases
  Family C2: calpain family
   121693519
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III CAPN13-like_C_EFh EF-hand_1 EF-hand_6 Sec_GG
Other DBs
NCBI-GeneID: 121693519
NCBI-ProteinID: XP_041928923
LinkDB
Position
19:complement(8776304..8787404)
AA seq 692 aa
MPPPGVCLNIMNERHKKKGKGSLEHPDKFLDQDFEQLLQYCNINRMRYIDDMFPPDLRSI
GKEVLQPDEMARVVWLRPGKMVEYPQFILDDVSRFDFGQGAIGNCWFLASIGALTFQKHI
RDQIIPAEQSFQDGYAGIFHFRFWRFGKWVDVVIDDKLPTIDGRLIFVRSKTPNEFWAAL
MEKAYAKVCGSYADMNAGSVSEALMDFTGGIHMTFKLDEAPPDLWDIMFRAAQSKSLMGC
GTPQGATAANTVLPNGIVEGHAYTITGVTKVMSNNQPVKLVRLFNPWGQGEWKGNWCDQS
SNWNTVSPEDRKQCHSVAEDGEFWMSMEDFCQSYSEMDICCLCPDFLDGESECHWTSKFH
DGRWVAGITAGGCMNYRDSFWTNPQYRIKVDAVDDACAAEQGPNNMLVSLMQKPDKRNRR
LVASLHIGFSVFSVPPEYQGRRGKLPAEFFMRNPVASSKNYLNAREVMEFFRLVPGEYII
VPSTFKPNETASFILAILSKTDSHFEESSSHHGEIQKPTPSKNEGDNDSKATFYRQMSDQ
YEEVGPEQLQKLLNQRLLEDKSPGFGIDTCRSLVAMMDLTVTGKLDNREFLRLWDRVVRY
SDIFNRVDITKNGSLTLGELRTGMIATGVQMNDDMLKLMALRYGGSTGRLTLESFVSFML
RLDCMSKIFNKMSDGMGMYLQQSEWLYLTMYS
NT seq 2079 nt   +upstreamnt  +downstreamnt
atgcctcctcctggtgtgtgtctgaatattatgaatgaacgccataagaaaaagggcaaa
ggatcccttgaacaccctgacaagttcctggatcaggactttgagcagcttctgcaatac
tgcaacattaatcgcatgaggtacatagatgacatgttcccaccggatcttaggtcgatt
ggaaaagaagtactacagcctgatgaaatggccagggttgtttggctaagaccagggaaa
atggtggaatatcctcaattcattttagatgatgtatcaagatttgattttggacaagga
gctattggaaactgttggtttctggcttctattggggcactgacatttcagaaacacatt
cgggaccaaattatacctgcagagcaatcttttcaggatggttatgcaggcatatttcat
ttcaggttctggagatttgggaagtgggtcgatgtggtgattgacgacaagcttccaaca
attgatgggagactgatatttgtacgctcaaaaacccccaatgagttttgggctgcactg
atggagaaggcctatgccaaggtttgtggctcctatgccgacatgaacgctggcagcgtg
tctgaggccctgatggacttcacaggcggcattcacatgacattcaagctggacgaagca
ccccctgacctctgggacatcatgttcagagctgcccagtccaaatccctaatgggctgt
ggcacgcctcaaggagccacagctgccaacactgttttacctaatggaattgtggagggt
cacgcctacacgatcacaggagtcactaaggtaatgagcaacaatcagcctgtgaaactg
gtgagattgttcaatccatggggacaaggagagtggaaagggaattggtgtgatcaatct
tccaactggaatactgtgagcccggaggacagaaaacagtgccactcagtggctgaagat
ggcgagttctggatgtcaatggaagatttctgccagagctattctgaaatggatatctgc
tgtttgtgccccgatttcctcgatggagaatcagagtgccactggacctccaaatttcac
gatggccgatgggttgctggaatcaccgctggcggctgcatgaattacagggatagtttc
tggacaaaccctcagtatcgcatcaaggtggacgctgtggacgatgcttgcgccgcggag
cagggaccaaacaacatgctggtgtccctcatgcagaagcccgacaagaggaacagacga
ctggtcgccagccttcacattggcttctccgttttcagtgtgccaccggagtaccaaggg
agacgagggaagttacctgcagagttcttcatgaggaaccctgtagcctcatccaaaaac
tacctgaatgctcgagaggtcatggagttcttcagattggtcccgggcgagtatatcatt
gtcccgtccactttcaagcccaatgagacggcctccttcatcttggccatactctccaag
acagacagccattttgaggaaagttcctctcatcatggggagattcagaagcccacccca
agtaaaaacgaaggtgataacgactccaaagcaaccttttaccgacagatgtcagatcag
tatgaggaggtgggtcctgagcaactccagaagcttctgaatcagagacttcttgaagac
aagtctccagggtttggcatcgatacctgccgcagcttggttgccatgatggatcttacg
gtcacaggcaaacttgacaaccgtgaattccttcggctgtgggaccgagttgtccgctat
agtgacattttcaatcgtgttgatataacaaaaaatggttccctgactcttggtgaactg
cggactggtatgattgccacaggtgtgcagatgaacgatgacatgctgaaactcatggct
ttgcgctacggtggctcaacaggacgtctgacgctggagagctttgtgtccttcatgctg
cgcttggactgcatgtccaagatattcaacaaaatgtcagatgggatgggcatgtacctt
cagcagagtgagtggctgtatctcactatgtattcctga

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